Contig 004501:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012F02Sequence458004501 (7)728003994 (6)emb|CDP05922.1|1e-91unnamed protein product [Coffea canephora]
JMFF018B15Sequence367004501 (7)729003994 (6)emb|CDP05922.1|2e-51unnamed protein product [Coffea canephora]
JMFF018G08Sequence419004501 (7)700003994 (6)ref|XP_009604687.1|3e-44PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana toment
JMFF032P20Sequence427004501 (7)687003994 (6)ref|XP_009604687.1|2e-41PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana toment
JMFF040O08Sequence455004501 (7)687003994 (6)emb|CDP05922.1|1e-95unnamed protein product [Coffea canephora]
JMFS057B07Sequence619004501 (7)emb|CBI20299.3|4e-23unnamed protein product [Vitis vinifera]
JMSF018F07Sequence281004501 (7)ref|XP_002285008.1|4e-16PREDICTED: probable serine/threonine-protein kinase At1g54610 [Vitis vinifera]776003994 (6)emb|CDP05922.1|1e-72unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF018F07+ CCTTCAGTAGCTTTAGGAA
                      ____________________________________________________________
consensus CCTTCAGTAGCTTTAGGAA
 
. : . : . : . : . : . :
JMSF018F07+ GTGTGGCCATTCCAGGATGAGGATGGTATGTGGTGGTCACTATATACTCCCCCTTCTCAC
                      ____________________________________________________________
consensus GTGTGGCCATTCCAGGATGAGGATGGTATGTGGTGGTCACTATATACTCCCCCTTCTCAC
 
. : . : . : . : . : . :
JMSF018F07+ TTCTCCTGTCAGATTTCCCATTATTCTGCAACCTCACTGAACCATTTGCTTGCTTCTCAA
JMFS057B07+ CCTGTCAGATTTCCCATTATTCTGCAACCTCACTGAACCATTTGCTTGCTTCTCAA
                      ____________________________________________________________
consensus TTCTCCTGTCAGATTTCCCATTATTCTGCAACCTCACTGAACCATTTGCTTGCTTCTCAA
 
. : . : . : . : . : . :
JMSF018F07+ TCAACATTGTCTTCACGTCATTACATTCCAATGGATCCTTCGCCCTGTAAGCTTCCTCTC
JMFS057B07+ TCAACATTGTCTTCACGTCATTACATTCCAATGGATCCTTCGCCCTGTAAGCTTCCTCTC
                      ____________________________________________________________
consensus TCAACATTGTCTTCACGTCATTACATTCCAATGGATCCTTCGCCCTGTAAGCTTCCTCTC
 
. : . : . : . : . : . :
JMSF018F07+ TCCTCCCTGTTGCCACCCGCAAATCCACTGAAGCC-TACATGACAGCCTCTCCCTTGGAC
JMFS057B07+ TCCTCCCTGTTGCCACCCGCAAATCCACTGAAGCCTTACATGACAGCCTCTCCCTTGGAC
                      ____________________________________________________________
consensus TCCTCCCTGTTGCCACCCGCAAATCCACTGAAGCCTTACATGACAGCCTCTCCCTTGGAC
 
. : . : . : . : . : . :
JMSF018F07+ TCTCCCTGCTATCTTCAATGGC
JMFS057B07+ TCTCCCTGCTATCTTCAATGGCAGAAGGTTTACAGCAAAGACAACCCATTCTATACCAAA
JMFF032P20+ CCCATTNTATNCCAAA
                      ____________________________________________________________
consensus TCTCCCTGCTATCTTCAATGGCAGAAGGTTTACAGCAAAGACAACCCATTCTATACCAAA
 
. : . : . : . : . : . :
JMFS057B07+ ATTAACTCAACCCCACCACC-TCCCACCTCACAACCTCCACATATTTTCTCC-AAAAAAA
JMFF018B15+ AACCTCCACATATTTTCTCC-AAAAAAA
JMFF032P20+ ATTAACTNAACCCCACCACCTTCCCACCTCACAACCTCCACATATTTTCTCC-AAAAAAA
JMFF018G08+ TCCCACCTCACAACCTCCACATATTTTCTCC-AAAAAAA
JMFF040O08+ CCTCACAACCTCCACATATTTTNTCCAAAAAAAA
JMFF012F02+ TCCCACCTCACAACCTCCACATATTTTCTCCAAAAAAAA
                      ____________________________________________________________
consensus ATTAACTCAACCCCACCACCTTCCCACCTCACAACCTCCACATATTTTCTCC-AAAAAAA
 
. : . : . : . : . : . :
JMFS057B07+ GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
JMFF018B15+ GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
JMFF032P20+ GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
JMFF018G08+ GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
JMFF040O08+ GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
JMFF012F02+ GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
                      ____________________________________________________________
consensus GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
 
. : . : . : . : . : . :
JMFS057B07+ CAAACGCATACATCACTCAAACAAC-AAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
JMFF018B15+ CAAACGCATACATCACTCAAACAAC-AAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
JMFF032P20+ CAAACGCATACATCACTCAAACAACAAAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
JMFF018G08+ CAAACGCATACATCACTCAAACAACAAAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
JMFF040O08+ CAAACGCATACATCACTCAAACAAC-AAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
JMFF012F02+ CAAACGCATACATCACTCAAACAAC-AAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
                      ____________________________________________________________
consensus CAAACGCATACATCACTCAAACAAC-AAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
 
. : . : . : . : . : . :
JMFS057B07+ GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
JMFF018B15+ GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
JMFF032P20+ GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
JMFF018G08+ GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
JMFF040O08+ GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
JMFF012F02+ GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
                      ____________________________________________________________
consensus GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
 
. : . : . : . : . : . :
JMFS057B07+ AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
JMFF018B15+ AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
JMFF032P20+ AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
JMFF018G08+ AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
JMFF040O08+ AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
JMFF012F02+ AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
                      ____________________________________________________________
consensus AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
 
. : . : . : . : . : . :
JMFS057B07+ GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
JMFF018B15+ GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
JMFF032P20+ GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
JMFF018G08+ GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
JMFF040O08+ GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
JMFF012F02+ GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
                      ____________________________________________________________
consensus GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
 
. : . : . : . : . : . :
JMFS057B07+ GAGTTTATGAGCAGTGCTAGTGTTCA
JMFF018B15+ GAGTTTATGAGCAGTGCTAGTGTTCACAGAGATGCAAAATT
JMFF032P20+ GAGTTTATGAGCAGTGCTAGTGTTCACAGAGATGCAAAATTGGGGAAAAA
JMFF018G08+ GAGTTTATGAGCAGTGCTAGTGTTCACAGAGATGCAAAATTGGGGAAAAA
JMFF040O08+ GAGTTTATGAGCAGTGCTAGTGTTCACAGAGATGCAAAATTGGGGAAAAATTGTTCATAC
JMFF012F02+ GAGTTTATGAGCAGTGCTAGTGTTCACAGAGATGCAAAATTGGGGAAAAATTGTTCATAC
                      ____________________________________________________________
consensus GAGTTTATGAGCAGTGCTAGTGTTCACAGAGATGCAAAATTGGGGAAAAATTGTTCATAC
 
. : . : . : . : . : . :
JMFF040O08+ AACTAGTTAGGTGTATTTATATATCACTGAACTGCTGGGCAGCTTTCTTTATTATCTGCC
JMFF012F02+ AACTAGTTAGGTGTATTTATATATCACTGAACTGCTGGGCAGCTTTCTTTATTATCTGCC
                      ____________________________________________________________
consensus AACTAGTTAGGTGTATTTATATATCACTGAACTGCTGGGCAGCTTTCTTTATTATCTGCC