| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012F02 | Sequence | 458 | 004501 (7) | 728 | 003994 (6) | emb|CDP05922.1| | 1e-91 | unnamed protein product [Coffea canephora] | |||
| JMFF018B15 | Sequence | 367 | 004501 (7) | 729 | 003994 (6) | emb|CDP05922.1| | 2e-51 | unnamed protein product [Coffea canephora] | |||
| JMFF018G08 | Sequence | 419 | 004501 (7) | 700 | 003994 (6) | ref|XP_009604687.1| | 3e-44 | PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana toment | |||
| JMFF032P20 | Sequence | 427 | 004501 (7) | 687 | 003994 (6) | ref|XP_009604687.1| | 2e-41 | PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana toment | |||
| JMFF040O08 | Sequence | 455 | 004501 (7) | 687 | 003994 (6) | emb|CDP05922.1| | 1e-95 | unnamed protein product [Coffea canephora] | |||
| JMFS057B07 | Sequence | 619 | 004501 (7) | emb|CBI20299.3| | 4e-23 | unnamed protein product [Vitis vinifera] | |||||
| JMSF018F07 | Sequence | 281 | 004501 (7) | ref|XP_002285008.1| | 4e-16 | PREDICTED: probable serine/threonine-protein kinase At1g54610 [Vitis vinifera] | 776 | 003994 (6) | emb|CDP05922.1| | 1e-72 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF018F07+ CCTTCAGTAGCTTTAGGAA
____________________________________________________________
consensus CCTTCAGTAGCTTTAGGAA
. : . : . : . : . : . :
JMSF018F07+ GTGTGGCCATTCCAGGATGAGGATGGTATGTGGTGGTCACTATATACTCCCCCTTCTCAC
____________________________________________________________
consensus GTGTGGCCATTCCAGGATGAGGATGGTATGTGGTGGTCACTATATACTCCCCCTTCTCAC
. : . : . : . : . : . :
JMSF018F07+ TTCTCCTGTCAGATTTCCCATTATTCTGCAACCTCACTGAACCATTTGCTTGCTTCTCAA
JMFS057B07+ CCTGTCAGATTTCCCATTATTCTGCAACCTCACTGAACCATTTGCTTGCTTCTCAA
____________________________________________________________
consensus TTCTCCTGTCAGATTTCCCATTATTCTGCAACCTCACTGAACCATTTGCTTGCTTCTCAA
. : . : . : . : . : . :
JMSF018F07+ TCAACATTGTCTTCACGTCATTACATTCCAATGGATCCTTCGCCCTGTAAGCTTCCTCTC
JMFS057B07+ TCAACATTGTCTTCACGTCATTACATTCCAATGGATCCTTCGCCCTGTAAGCTTCCTCTC
____________________________________________________________
consensus TCAACATTGTCTTCACGTCATTACATTCCAATGGATCCTTCGCCCTGTAAGCTTCCTCTC
. : . : . : . : . : . :
JMSF018F07+ TCCTCCCTGTTGCCACCCGCAAATCCACTGAAGCC-TACATGACAGCCTCTCCCTTGGAC
JMFS057B07+ TCCTCCCTGTTGCCACCCGCAAATCCACTGAAGCCTTACATGACAGCCTCTCCCTTGGAC
____________________________________________________________
consensus TCCTCCCTGTTGCCACCCGCAAATCCACTGAAGCCTTACATGACAGCCTCTCCCTTGGAC
. : . : . : . : . : . :
JMSF018F07+ TCTCCCTGCTATCTTCAATGGC
JMFS057B07+ TCTCCCTGCTATCTTCAATGGCAGAAGGTTTACAGCAAAGACAACCCATTCTATACCAAA
JMFF032P20+ CCCATTNTATNCCAAA
____________________________________________________________
consensus TCTCCCTGCTATCTTCAATGGCAGAAGGTTTACAGCAAAGACAACCCATTCTATACCAAA
. : . : . : . : . : . :
JMFS057B07+ ATTAACTCAACCCCACCACC-TCCCACCTCACAACCTCCACATATTTTCTCC-AAAAAAA
JMFF018B15+ AACCTCCACATATTTTCTCC-AAAAAAA
JMFF032P20+ ATTAACTNAACCCCACCACCTTCCCACCTCACAACCTCCACATATTTTCTCC-AAAAAAA
JMFF018G08+ TCCCACCTCACAACCTCCACATATTTTCTCC-AAAAAAA
JMFF040O08+ CCTCACAACCTCCACATATTTTNTCCAAAAAAAA
JMFF012F02+ TCCCACCTCACAACCTCCACATATTTTCTCCAAAAAAAA
____________________________________________________________
consensus ATTAACTCAACCCCACCACCTTCCCACCTCACAACCTCCACATATTTTCTCC-AAAAAAA
. : . : . : . : . : . :
JMFS057B07+ GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
JMFF018B15+ GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
JMFF032P20+ GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
JMFF018G08+ GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
JMFF040O08+ GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
JMFF012F02+ GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
____________________________________________________________
consensus GCATCTTTCGCCATTATTGAAACAGTAAAAACAACCAAACTTTACCCCCCAAGATCTACC
. : . : . : . : . : . :
JMFS057B07+ CAAACGCATACATCACTCAAACAAC-AAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
JMFF018B15+ CAAACGCATACATCACTCAAACAAC-AAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
JMFF032P20+ CAAACGCATACATCACTCAAACAACAAAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
JMFF018G08+ CAAACGCATACATCACTCAAACAACAAAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
JMFF040O08+ CAAACGCATACATCACTCAAACAAC-AAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
JMFF012F02+ CAAACGCATACATCACTCAAACAAC-AAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
____________________________________________________________
consensus CAAACGCATACATCACTCAAACAAC-AAAAAATCAGCTCAGTTCAGAACCCAAGAAACCT
. : . : . : . : . : . :
JMFS057B07+ GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
JMFF018B15+ GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
JMFF032P20+ GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
JMFF018G08+ GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
JMFF040O08+ GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
JMFF012F02+ GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
____________________________________________________________
consensus GCCATTCATTCAGAACCATGCACATCCGTACCAAACAAATACCCACAACTGAATTCAAGA
. : . : . : . : . : . :
JMFS057B07+ AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
JMFF018B15+ AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
JMFF032P20+ AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
JMFF018G08+ AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
JMFF040O08+ AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
JMFF012F02+ AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
____________________________________________________________
consensus AATTTGCCAGCAAAAAAGGAATGGGTCACCTTGAATGAGAGGTGAAAGTGAGGGAGTAGT
. : . : . : . : . : . :
JMFS057B07+ GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
JMFF018B15+ GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
JMFF032P20+ GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
JMFF018G08+ GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
JMFF040O08+ GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
JMFF012F02+ GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
____________________________________________________________
consensus GGGCTGGTGAAACTAAAAAAGACACAGAAAAAATGGGGGGATCTAGGGCATAGATAGATT
. : . : . : . : . : . :
JMFS057B07+ GAGTTTATGAGCAGTGCTAGTGTTCA
JMFF018B15+ GAGTTTATGAGCAGTGCTAGTGTTCACAGAGATGCAAAATT
JMFF032P20+ GAGTTTATGAGCAGTGCTAGTGTTCACAGAGATGCAAAATTGGGGAAAAA
JMFF018G08+ GAGTTTATGAGCAGTGCTAGTGTTCACAGAGATGCAAAATTGGGGAAAAA
JMFF040O08+ GAGTTTATGAGCAGTGCTAGTGTTCACAGAGATGCAAAATTGGGGAAAAATTGTTCATAC
JMFF012F02+ GAGTTTATGAGCAGTGCTAGTGTTCACAGAGATGCAAAATTGGGGAAAAATTGTTCATAC
____________________________________________________________
consensus GAGTTTATGAGCAGTGCTAGTGTTCACAGAGATGCAAAATTGGGGAAAAATTGTTCATAC
. : . : . : . : . : . :
JMFF040O08+ AACTAGTTAGGTGTATTTATATATCACTGAACTGCTGGGCAGCTTTCTTTATTATCTGCC
JMFF012F02+ AACTAGTTAGGTGTATTTATATATCACTGAACTGCTGGGCAGCTTTCTTTATTATCTGCC
____________________________________________________________
consensus AACTAGTTAGGTGTATTTATATATCACTGAACTGCTGGGCAGCTTTCTTTATTATCTGCC