Contig 004500:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012A08Sequence252004500 (3)806002542 (4)ref|XP_011090068.1|56.6PREDICTED: uncharacterized protein LOC105170843 [Sesamum indicum]
JMSF001K17Sequence211004500 (3)734002542 (4)ref|XP_011090068.1|55.1PREDICTED: uncharacterized protein LOC105170843 [Sesamum indicum]
JMSF030D08Sequence245004500 (3)729002542 (4)ref|XP_011090068.1|55.1PREDICTED: uncharacterized protein LOC105170843 [Sesamum indicum]

Alignment

This contig is upended


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JMSF001K17+                                                              GGATGAGAA
                      ____________________________________________________________
consensus                                                                GGATGAGAA
 
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JMSF001K17+           AAAGCAACGCCACGATTGGGAGACGGGCGACGAATTTCACAAATGCCGCATCTCCCCAAC
JMSF030D08+                                                               TCCCCAAC
JMFF012A08+                                                               TCCCCAAC
                      ____________________________________________________________
consensus             AAAGCAACGCCACGATTGGGAGACGGGCGACGAATTTCACAAATGCCGCATCTCCCCAAC
 
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JMSF001K17+           CCCCCACTTCTCCCCCCCTTACCTAAACGAATTCTCGTATTGTTCTTGTAATTTCAAACC
JMSF030D08+           CCCCCACTTCTCCCCCCCTTACCTAAACGAATTCTCGTATTGTTCTTGTAATTTCAAACC
JMFF012A08+           CCCCCACTTCTCCCCCCCTTACCTAAACGAATTCTCGTATTGTTCTTGTAATTTCAAACC
                      ____________________________________________________________
consensus             CCCCCACTTCTCCCCCCCTTACCTAAACGAATTCTCGTATTGTTCTTGTAATTTCAAACC
 
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JMSF001K17+           CAGGCCCCCGGGCATCATATTTCGATTTCGGTTTTGTTTTGTCGATATTTACACATACAT
JMSF030D08+           CAGGCCCCCGGGCATCATATTTCGATTTCGGTTTTGTTTTGTCGATATTTACACATACAT
JMFF012A08+           CAGGCCCCCGGGCATCATATTTCGATTTCGGTTTTGTTTTGTCGATATTTACACATACAT
                      ____________________________________________________________
consensus             CAGGCCCCCGGGCATCATATTTCGATTTCGGTTTTGTTTTGTCGATATTTACACATACAT
 
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JMSF001K17+           TCTGTATCTAAACTCAAAACC                                       
JMSF030D08+           TCTGTATCTAAACTCAAAACCAAATTCATCTCTATTCCTTCTTCCCCTTTCTCTCTTCTC
JMFF012A08+           TCTGTATCTAAACTCAAAACCAAATTCATCTCTATTCCTTCTTCCCCTTTCTCTCTTCTC
                      ____________________________________________________________
consensus             TCTGTATCTAAACTCAAAACCAAATTCATCTCTATTCCTTCTTCCCCTTTCTCTCTTCTC
 
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JMSF030D08+           CCGTCGGGAATTCCCGCGGCAAGGCGGAATTGCGCCGCGACGCCACGAGAAAAC      
JMFF012A08+           CCGTCGGGAATTCCCGCGGCAAGGCGGAATTGCGCCGCGACGCCACGAGAAAACAAACCC
                      ____________________________________________________________
consensus             CCGTCGGGAATTCCCGCGGCAAGGCGGAATTGCGCCGCGACGCCACGAGAAAACAAACCC