clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF011D13 | Sequence | 530 | 004493 (3) | ref|XP_006351734.1| | 245 | PREDICTED: uncharacterized protein LOC102593259 [Solanum tuberosum] | 713 | 002958 (3) | ref|XP_009600013.1| | 152 | PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis] |
JMSF042I21 | Sequence | 764 | 004493 (3) | ref|XP_009600013.1| | 258 | PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis] | 710 | 002958 (3) | ref|XP_009600013.1| | 157 | PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis] |
JMSF047P05 | Sequence | 692 | 004493 (3) | ref|XP_009600013.1| | 258 | PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis] | 740 | 002958 (3) | ref|XP_009600013.1| | 157 | PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF042I21+ GT
____________________________________________________________
consensus GT
. : . : . : . : . : . :
JMSF042I21+ CTCGATTTAGAAACATTACAGGCTGCGGTTGCGGTTGCTGCTCTCTGCTCGAGCTTGGCT
____________________________________________________________
consensus CTCGATTTAGAAACATTACAGGCTGCGGTTGCGGTTGCTGCTCTCTGCTCGAGCTTGGCT
. : . : . : . : . : . :
JMSF042I21+ GCTGCATGGAGGTCACAGGTTGAACCGGGTCTCGAGAAAGAAACGTCACTGACTGCCCAG
JMSF047P05+ AGGTTGAACCGGGTCTCGAGAAAGAAACGTCACTGACTGCCCAG
____________________________________________________________
consensus GCTGCATGGAGGTCACAGGTTGAACCGGGTCTCGAGAAAGAAACGTCACTGACTGCCCAG
. : . : . : . : . : . :
JMSF042I21+ AGCTAATTGGCTGCTGTTCTCGACTACCAAAGAATATTTGCTGTTGCTCTCTGCTGGAGT
JMSF047P05+ AGCTAATTGGCTGCTGTTCTCGACTACCAAAGAATATTTGCTGTTGCTCTCTGCTGGAGT
____________________________________________________________
consensus AGCTAATTGGCTGCTGTTCTCGACTACCAAAGAATATTTGCTGTTGCTCTCTGCTGGAGT
. : . : . : . : . : . :
JMSF042I21+ TGGGGAAGACATTAAACGCACTGGGCTGCTGCACAGAAGATACCGTGTTCGGGGCAGAAG
JMSF047P05+ TGGGGAAGACATTAAACGCACTGGGCTGCTGCACAGAAGATACCGTGTTCGGGGCAGAAG
____________________________________________________________
consensus TGGGGAAGACATTAAACGCACTGGGCTGCTGCACAGAAGATACCGTGTTCGGGGCAGAAG
. : . : . : . : . : . :
JMSF042I21+ GAACCGGGTCCGGGTTGAGGTTTAAAAAGAACCCGAGCTCTTTATCATACAAGCTCTTCC
JMSF047P05+ GAACCGGGTCCGGGTTGAGGTTTAAAAAGAACCCGAGCTCTTTATCATACAAGCTCTTCC
JMFF011D13+ CGGGTTGAGGTTTAAAAAGAACCCGAGCTCTTTATCATACAAGCTCTTCC
____________________________________________________________
consensus GAACCGGGTCCGGGTTGAGGTTTAAAAAGAACCCGAGCTCTTTATCATACAAGCTCTTCC
. : . : . : . : . : . :
JMSF042I21+ TGAAAGGGTTTGAGAGCAACGACCATGCATCGACGACGAGGCGGAAGGCTTGATCGGCGA
JMSF047P05+ TGAAAGGGTTTGAGAGCAACGACCATGCATCGACGACGAGGCGGAAGGCTTGATCGGCGA
JMFF011D13+ TGAAAGGGTTTGAGAGCAACGACCATGCATCGACGACGAGGCGGAAGGCTTGATCGGCGA
____________________________________________________________
consensus TGAAAGGGTTTGAGAGCAACGACCATGCATCGACGACGAGGCGGAAGGCTTGATCGGCGA
. : . : . : . : . : . :
JMSF042I21+ AGGAGAGCGTGTTCTTCTGGGGGTTGAGCAGTAGAGCGAGGCGGCGGTACTGATTGGCTA
JMSF047P05+ AGGAGAGCGTGTTCTTCTGGGGGTTGAGCAGTAGAGCGAGGCGGCGGTACTGATTGGCTA
JMFF011D13+ AGGAGAGCGTGTTCTTCTGGGGGTTGAGCAGTAGAGCGAGGCGGCGGTACTGATTGGCTA
____________________________________________________________
consensus AGGAGAGCGTGTTCTTCTGGGGGTTGAGCAGTAGAGCGAGGCGGCGGTACTGATTGGCTA
. : . : . : . : . : . :
JMSF042I21+ TGAACTCGGAATCATGGCTCTGGTTGGGAGCCACTTGGAGGATGCCGTACCAGTCCAAGT
JMSF047P05+ TGAACTCGGAATCATGGCTCTGGTTGGGAGCCACTTGGAGGATGCCGTACCAGTCCAAGT
JMFF011D13+ TGAACTCGGAATCATGGCTCTGGTTGGGAGCCACTTGGAGGATGCCGTACCAGTCCAAGT
____________________________________________________________
consensus TGAACTCGGAATCATGGCTCTGGTTGGGAGCCACTTGGAGGATGCCGTACCAGTCCAAGT
. : . : . : . : . : . :
JMSF042I21+ GCTGGTTGTTGATCCGCTTCTCGCCGGCGAGTAGAGTGTCGGCGATGGCTAGGATTTGCT
JMSF047P05+ GCTGGTTGTTGATCCGCTTCTCGCCGGCGAGTAGAGTGTCGGCGATGGCTAGGATTTGCT
JMFF011D13+ GCTGGTTGTTGATCCGCTTCTCGCCGGCGAGTAGAGTGTCGGCGATGGCTAGGATTTGCT
____________________________________________________________
consensus GCTGGTTGTTGATCCGCTTCTCGCCGGCGAGTAGAGTGTCGGCGATGGCTAGGATTTGCT
. : . : . : . : . : . :
JMSF042I21+ CCGCCTGTACGAGACTAGGGTCCGAATCTCGGGCCCGGGTCGCAAACGATTTGCACCCTA
JMSF047P05+ CCGCCTGTACGAGACTAGGGTCCGAATCTCGGGCCCGGGTCGCAAACGATTTGCACCCTA
JMFF011D13+ CCGCCTGTACGAGACTAGGGTCCGAATCTCGGGCCCGGGTCGCAAACGATTTGCACCCTA
____________________________________________________________
consensus CCGCCTGTACGAGACTAGGGTCCGAATCTCGGGCCCGGGTCGCAAACGATTTGCACCCTA
. : . : . : . : . : . :
JMSF042I21+ CTAGATCACGATTGTTCAATAGCTTCTCCGCGATTGACAGCCATCGGATTGCCTCCGCCC
JMSF047P05+ CTAGATCACGATTGTTCAATAGCTTCTCCGCGATTGACAGCCATCGGATTGCCTCCGCCC
JMFF011D13+ CTAGATCACGATTGTTCAATAGCTTCTCCGCGATTGACAGCCATCGGATTGCCTCCGCCC
____________________________________________________________
consensus CTAGATCACGATTGTTCAATAGCTTCTCCGCGATTGACAGCCATCGGATTGCCTCCGCCC
. : . : . : . : . : . :
JMSF042I21+ GATTGGAGTTAGGGTTGATGAAGAACGGGTGCTCCATTTTCCGCCGGAATTTTTTGATTT
JMSF047P05+ GATTGGAGTTAGGGTTGATGAAGAACGGGTGCTCCATTTTCCGCCGGAATTTTTTGATTT
JMFF011D13+ GATTGGAGTTAGGGTTGATGAAGAACGGGTGCTCCATTTTCCGCCGGAATTTTTTGATTT
____________________________________________________________
consensus GATTGGAGTTAGGGTTGATGAAGAACGGGTGCTCCATTTTCCGCCGGAATTTTTTGATTT
. : . : . : . : . : . :
JMSF042I21+ AATCGGAAAAGTAACTCTGCTTTCTCCTTTGATTTGATTCC
JMSF047P05+ AATCGGAAAAGTAACTCTGCTTTCTCCTTTGATTTGATTCC
JMFF011D13+ AATCGGAAAAGTAACTCTGCTTTCTCCTTTGATTTGATTCCAAATGCGAAATGAAAAGGT
____________________________________________________________
consensus AATCGGAAAAGTAACTCTGCTTTCTCCTTTGATTTGATTCCAAATGCGAAATGAAAAGGT