Contig 004490:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010L16Sequence550004490 (2)ref|XP_011087753.1|2e-51PREDICTED: 3-ketoacyl-CoA synthase 7 [Sesamum indicum]746005357 (3)ref|XP_010657694.1|4e-105PREDICTED: 3-ketoacyl-CoA synthase 7 [Vitis vinifera]
JMFF049D08Sequence619004490 (2)ref|XP_011087753.1|6e-47PREDICTED: 3-ketoacyl-CoA synthase 7 [Sesamum indicum]615024428ref|XP_010657694.1|2e-56PREDICTED: 3-ketoacyl-CoA synthase 7 [Vitis vinifera]

Alignment

This contig is upended


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JMFF049D08+                                                    CAAAGCCAGGGAGTTTTGT
                      ____________________________________________________________
consensus                                                      CAAAGCCAGGGAGTTTTGT
 
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JMFF049D08+           NGGACTTNAAGGATGTCTTTAACCACACCGATCGAGAGAATCCCCGCGCTGCACCCCATC
JMFF010L16+                                                            TGCACCCCATC
                      ____________________________________________________________
consensus             NGGACTTNAAGGATGTCTTTAACCACACCGATCGAGAGAATCCCCGCGCTGCACCCCATC
 
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JMFF049D08+           CCACACAGGCTAAAGCTCTTCACATTGCTCCTCAGCCCAAACTTATTAATGACCATAGAA
JMFF010L16+           CCACACAGGCTAAAGCTCTTCACATTGCTCCTCAGCCCAAACTTATTAATGACCATAGAA
                      ____________________________________________________________
consensus             CCACACAGGCTAAAGCTCTTCACATTGCTCCTCAGCCCAAACTTATTAATGACCATAGAA
 
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JMFF049D08+           GTGATGGAGGGGGTGGGGCAGAAAAGGCTGCAATTAGACACAACAATGTCTATGCTCCCC
JMFF010L16+           GTGATGGAGGGGGTGGGGCAGAAAAGGCTGCAATTAGACACAACAATGTCTATGCTCCCC
                      ____________________________________________________________
consensus             GTGATGGAGGGGGTGGGGCAGAAAAGGCTGCAATTAGACACAACAATGTCTATGCTCCCC
 
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JMFF049D08+           GGGGCTCACATTGTGTTTTTCGAGTAGATTTTTCACCACACTGAACAGAACCGTCTCGAT
JMFF010L16+           -GGGCTCACATTGTGTTTTTCGAGTAGATTTTTCACCACACTGAACAGAACCGTCTCGAT
                      ____________________________________________________________
consensus             GGGGCTCACATTGTGTTTTTCGAGTAGATTTTTCACCACACTGAACAGAACCGTCTCGAT
 
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JMFF049D08+           TTCATCCCTGGAGGCCTCCAGGGAGCAGTCAGGGGGGAGGTGGTGCATCACGTGGGGGGC
JMFF010L16+           TTCATCCCTGGAGGCCTCCAGGGAGCAGTCAGGGGGGAGGTGGTGCATCACGTGGGGGGC
                      ____________________________________________________________
consensus             TTCATCCCTGGAGGCCTCCAGGGAGCAGTCAGGGGGGAGGTGGTGCATCACGTGGGGGGC
 
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JMFF049D08+           ACCCGCCTCGCTGCTGATCCCGGACCTCGTCCCGGACTTCACGTGGAAGTCGAACGCCTC
JMFF010L16+           ACCCGCCTCGCTGCTGATCCCGGACCTCGTCCCGGACTTCACGTGGAAGTCGAACGCCTC
                      ____________________________________________________________
consensus             ACCCGCCTCGCTGCTGATCCCGGACCTCGTCCCGGACTTCACGTGGAAGTCGAACGCCTC
 
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JMFF049D08+           GGGGGCAGTGCAGTGCAGCCCTTGCTCCACAAAGAAGGCGGTGGTCACCCTCGTGTGGTC
JMFF010L16+           GGGGGCAGTGCAGTGCAGCCCTTGCTCCACAAAGAAGGCGGTGGTCACCCTCGTGTGGTC
                      ____________________________________________________________
consensus             GGGGGCAGTGCAGTGCAGCCCTTGCTCCACAAAGAAGGCGGTGGTCACCCTCGTGTGGTC
 
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JMFF049D08+           CGGGGGCCTGTAGCAGCAGAAGTCGAGAAGGTAAACCGGGTGGGATCCGAAAACACAGTA
JMFF010L16+           CGGGGGCCTGTAGCAGCAGAAGTCGAGAAGGTAAACCGGGTGGGATCCGAAAACACAGTA
                      ____________________________________________________________
consensus             CGGGGGCCTGTAGCAGCAGAAGTCGAGAAGGTAAACCGGGTGGGATCCGAAAACACAGTA
 
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JMFF049D08+           GTAGAGAAGTAGTAGTAGTAAGACGGCTGCCATGGCATGGAAGGGAGTGAATGATGCATT
JMFF010L16+           GTAGAGAAGTAGTAGTAGTAAGACGGCTGCCATGGCATGGAAGGGAGTGAATGATGCATT
                      ____________________________________________________________
consensus             GTAGAGAAGTAGTAGTAGTAAGACGGCTGCCATGGCATGGAAGGGAGTGAATGATGCATT
 
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JMFF049D08+           CAAGAAATAATCTGTGACCATTTGGAACATGTTTGGATAATGTTGTACCCAAGTTC    
JMFF010L16+           CAAGAAATAATCTGTGACCATTTGGAACATGTTTGGATAATGTTGTACCCAAGTTCACAT
                      ____________________________________________________________
consensus             CAAGAAATAATCTGTGACCATTTGGAACATGTTTGGATAATGTTGTACCCAAGTTCACAT