Contig 004488:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010I09Sequence598004488 (2)ref|XP_011086852.1|6e-59PREDICTED: uncharacterized protein At2g33490 [Sesamum indicum]641003965 (2)emb|CDP13398.1|4e-08unnamed protein product [Coffea canephora]
JMSF043A02Sequence259004488 (2)gb|KHG10542.1|4e-32hypothetical protein F383_16390 [Gossypium arboreum]810003965 (2)emb|CDP13398.1|2e-10unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF010I09+ TTTCTCTCTATATTTTTGCATCAAGAGATCGAATGCTTCTCTTTTTGCATCACATTGC
                      ____________________________________________________________
consensus TTTCTCTCTATATTTTTGCATCAAGAGATCGAATGCTTCTCTTTTTGCATCACATTGC
 
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JMSF043A02+ CTGTGATT
JMFF010I09+ TTCTTCATGTCCTCAACTATGTTTAGTTCATGGAGGAGGGACTCTGATGGTGCTGTGATT
                      ____________________________________________________________
consensus TTCTTCATGTCCTCAACTATGTTTAGTTCATGGAGGAGGGACTCTGATGGTGCTGTGATT
 
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JMSF043A02+ GTNTGAGAAATATGGGACCGATAAGTATCTAAAAGTTTCTGGAGTCGAAANTGAACCTTG
JMFF010I09+ GTTTGAGAAATATGGGACCGATAAGTATCTAAAAGTTTCTGGAGTTGAAATTGAACCTTG
                      ____________________________________________________________
consensus GTTTGAGAAATATGGGACCGATAAGTATCTAAAAGTTTCTGGAGTTGAAATTGAACCTTG
 
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JMSF043A02+ CCCAGCATGAGTAACACTTTACCACTATCTTGGTCATCAACCAATGCTGTCTTTTCAAGA
JMFF010I09+ CCCAGCATGAGTAACACTTTACCACTATCTTGGTCATCAACCAATGCTGTCTTTTCAAGA
                      ____________________________________________________________
consensus CCCAGCATGAGTAACACTTTACCACTATCTTGGTCATCAACCAATGCTGTCTTTTCAAGA
 
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JMSF043A02+ AGACAGTCGCCCATTTCCCCCAGTGACTCTGAAAATTCATATGCACTGTTTGCTGTCGCT
JMFF010I09+ AGACAGTCGCCCATTTCCCCCAGTGACTCTGAAAATTCATATGCACTGTTTGCTGTCGCT
                      ____________________________________________________________
consensus AGACAGTCGCCCATTTCCCCCAGTGACTCTGAAAATTCATATGCACTGTTTGCTGTCGCT
 
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JMSF043A02+ GCAGCCGCAGAAAGCAATTTTTCATAGCAGTCTCTCGTGTCTTGCATATCCTGATTAGCC
JMFF010I09+ GCAGCCGCAGAAAGCAATTTTTCATAGCAGTCTCTCGTGTCTTGCATATCCTGATTAGCC
                      ____________________________________________________________
consensus GCAGCCGCAGAAAGCAATTTTTCATAGCAGTCTCTCGTGTCTTGCATATCCTGATTAGCC
 
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JMSF043A02+ TGAGCCAAC
JMFF010I09+ TGAGCCAACTCATCTTCCTTAGTGCAGGATCGGAGCTTCCGTTCTCTTCTATCATGTCGA
                      ____________________________________________________________
consensus TGAGCCAACTCATCTTCCTTAGTGCAGGATCGGAGCTTCCGTTCTCTTCTATCATGTCGA
 
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JMFF010I09+ AGCGCGGCAAATCCTCGCAGTTTCCTTAGAGACGTCTTCATCTTGCAGACGTATAACCAC
                      ____________________________________________________________
consensus AGCGCGGCAAATCCTCGCAGTTTCCTTAGAGACGTCTTCATCTTGCAGACGTATAACCAC
 
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JMFF010I09+ GCACCAAAACAGAGTTGCGTGTATATATATATTTATATATAGAGAGAGAAAAGGGGGGAA
                      ____________________________________________________________
consensus GCACCAAAACAGAGTTGCGTGTATATATATATTTATATATAGAGAGAGAAAAGGGGGGAA
 
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JMFF010I09+ AATGCAAGACGTGTTGAAAGATTTCAGAAGCTTTTTCGAATTGAAACCTAATCGGTTCTC
                      ____________________________________________________________
consensus AATGCAAGACGTGTTGAAAGATTTCAGAAGCTTTTTCGAATTGAAACCTAATCGGTTCTC