Contig 004488:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF010I09+             TTTCTCTCTATATTTTTGCATCAAGAGATCGAATGCTTCTCTTTTTGCATCACATTGC
                      ____________________________________________________________
consensus               TTTCTCTCTATATTTTTGCATCAAGAGATCGAATGCTTCTCTTTTTGCATCACATTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043A02+                                                               CTGTGATT
JMFF010I09+           TTCTTCATGTCCTCAACTATGTTTAGTTCATGGAGGAGGGACTCTGATGGTGCTGTGATT
                      ____________________________________________________________
consensus             TTCTTCATGTCCTCAACTATGTTTAGTTCATGGAGGAGGGACTCTGATGGTGCTGTGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043A02+           GTNTGAGAAATATGGGACCGATAAGTATCTAAAAGTTTCTGGAGTCGAAANTGAACCTTG
JMFF010I09+           GTTTGAGAAATATGGGACCGATAAGTATCTAAAAGTTTCTGGAGTTGAAATTGAACCTTG
                      ____________________________________________________________
consensus             GTTTGAGAAATATGGGACCGATAAGTATCTAAAAGTTTCTGGAGTTGAAATTGAACCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043A02+           CCCAGCATGAGTAACACTTTACCACTATCTTGGTCATCAACCAATGCTGTCTTTTCAAGA
JMFF010I09+           CCCAGCATGAGTAACACTTTACCACTATCTTGGTCATCAACCAATGCTGTCTTTTCAAGA
                      ____________________________________________________________
consensus             CCCAGCATGAGTAACACTTTACCACTATCTTGGTCATCAACCAATGCTGTCTTTTCAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043A02+           AGACAGTCGCCCATTTCCCCCAGTGACTCTGAAAATTCATATGCACTGTTTGCTGTCGCT
JMFF010I09+           AGACAGTCGCCCATTTCCCCCAGTGACTCTGAAAATTCATATGCACTGTTTGCTGTCGCT
                      ____________________________________________________________
consensus             AGACAGTCGCCCATTTCCCCCAGTGACTCTGAAAATTCATATGCACTGTTTGCTGTCGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043A02+           GCAGCCGCAGAAAGCAATTTTTCATAGCAGTCTCTCGTGTCTTGCATATCCTGATTAGCC
JMFF010I09+           GCAGCCGCAGAAAGCAATTTTTCATAGCAGTCTCTCGTGTCTTGCATATCCTGATTAGCC
                      ____________________________________________________________
consensus             GCAGCCGCAGAAAGCAATTTTTCATAGCAGTCTCTCGTGTCTTGCATATCCTGATTAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043A02+           TGAGCCAAC                                                   
JMFF010I09+           TGAGCCAACTCATCTTCCTTAGTGCAGGATCGGAGCTTCCGTTCTCTTCTATCATGTCGA
                      ____________________________________________________________
consensus             TGAGCCAACTCATCTTCCTTAGTGCAGGATCGGAGCTTCCGTTCTCTTCTATCATGTCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF010I09+           AGCGCGGCAAATCCTCGCAGTTTCCTTAGAGACGTCTTCATCTTGCAGACGTATAACCAC
                      ____________________________________________________________
consensus             AGCGCGGCAAATCCTCGCAGTTTCCTTAGAGACGTCTTCATCTTGCAGACGTATAACCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF010I09+           GCACCAAAACAGAGTTGCGTGTATATATATATTTATATATAGAGAGAGAAAAGGGGGGAA
                      ____________________________________________________________
consensus             GCACCAAAACAGAGTTGCGTGTATATATATATTTATATATAGAGAGAGAAAAGGGGGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF010I09+           AATGCAAGACGTGTTGAAAGATTTCAGAAGCTTTTTCGAATTGAAACCTAATCGGTTCTC
                      ____________________________________________________________
consensus             AATGCAAGACGTGTTGAAAGATTTCAGAAGCTTTTTCGAATTGAAACCTAATCGGTTCTC