| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003H01 | Sequence | 495 | 004486 (7) | gb|KDO78340.1| | 1e-12 | hypothetical protein CISIN_1g004125mg [Citrus sinensis] gb|KDO78341.1| hypotheti | 507 | 013599 (7) | |||
| JMFF010D16 | Sequence | 492 | 004486 (7) | gb|KDO78340.1| | 2e-12 | hypothetical protein CISIN_1g004125mg [Citrus sinensis] gb|KDO78341.1| hypotheti | 750 | 013599 (7) | gb|ABK96436.1| | 9e-82 | unknown [Populus trichocarpa x Populus deltoides] |
| JMFS089H10 | Sequence | 619 | 004486 (7) | ref|XP_011086200.1| | 1e-49 | PREDICTED: calcium permeable stress-gated cation channel 1-like [Sesamum indicu | |||||
| JMFS144D02 | Sequence | 626 | 004486 (7) | ref|XP_011086200.1| | 9e-48 | PREDICTED: calcium permeable stress-gated cation channel 1-like [Sesamum indicu | |||||
| JMFS149D12 | Sequence | 580 | 004486 (7) | ref|XP_011086200.1| | 1e-51 | PREDICTED: calcium permeable stress-gated cation channel 1-like [Sesamum indicu | |||||
| JMSF009F21 | Sequence | 409 | 004486 (7) | 690 | 013599 (7) | ref|XP_007141612.1| | 1e-65 | hypothetical protein PHAVU_008G210700g [Phaseolus vulgaris] gb|ESW13606.1| hypot | |||
| JMSF011A23 | Sequence | 275 | 004486 (7) | 679 | 013599 (7) | gb|ABK96436.1| | 1e-75 | unknown [Populus trichocarpa x Populus deltoides] | |||
This contig is upended
. : . : . : . : . : . :
JMFS149D12+ ACCATGAGAGCAA
JMFS089H10+ GAGAGCAA
____________________________________________________________
consensus ACCATGAGAGCAA
. : . : . : . : . : . :
JMFS149D12+ TGCCAAAGGAACAAAAATCTTAAGCCCTAGCAAGTAAATCCTCAAATATACCGCAGAGTC
JMFS089H10+ TGCCAAAGGAACAAAAATCTTAAGCCCTAGCAAGTAAATCCTCAAATATACCGCAGAGTC
JMFS144D02+ AGGAACAAAAATCTTAAGCCCTAGCAAGTAAATCCTCAAATATACCGCAGAGTC
____________________________________________________________
consensus TGCCAAAGGAACAAAAATCTTAAGCCCTAGCAAGTAAATCCTCAAATATACCGCAGAGTC
. : . : . : . : . : . :
JMFS149D12+ AAGTCCAGCATGTTCAATAAGCTCGGGTTCGGGCATTCTAAGTGCATCGGGCACCCAATT
JMFS089H10+ AAGTCCAGCATGTTCAATAAGCTCGGGTTCGGGCATTCTAAGTGCATCGGGCACCCAATT
JMFS144D02+ AAGTCCAGCATGTTCAATAAGCTCGGGTTCGGGCATTCTAAGTGCATCGGGCACCCAATT
____________________________________________________________
consensus AAGTCCAGCATGTTCAATAAGCTCGGGTTCGGGCATTCTAAGTGCATCGGGCACCCAATT
. : . : . : . : . : . :
JMFS149D12+ CAGAAACCTCACGTAAGCTCTCCAATCCAAATTGACAAACCTCTTTAACAACGCCCCAGA
JMFS089H10+ CAGAAACCTCACGTAAGCTCTCCAATCCAAATTGACAAACCTCTTTAACAACGCCCCAGA
JMFS144D02+ CAGAAACCTCACGTAAGCTCTCCAATCCAAATTGACAAACCTCTTTAACAACGCCCCAGA
JMFF003H01+ TAACAACGCCCCAGA
JMFF010D16+ CAACGCCCCAGA
____________________________________________________________
consensus CAGAAACCTCACGTAAGCTCTCCAATCCAAATTGACAAACCTCTTTAACAACGCCCCAGA
. : . : . : . : . : . :
JMFS149D12+ GTGCGTGGGGCTATCTCTCAACCCCTTGAGATACCATTTCGGGAAATAGACTCTATCGTT
JMFS089H10+ GTGCGTGGGGCTATCTCTCAACCCCTTGAGATACCATTTCGGGAAATAGACTCTATCGTT
JMFS144D02+ GTGCGTGGGGCTATCTCTCAACCCCTTGAGATACCATTTCGGGAAATAGACTCTATCGTT
JMFF003H01+ GTGCGTGGGGCTATCTCTCAACCCCTTGAGATACCATTTCGGGAAATAGACTCTATCGTT
JMFF010D16+ GTGCGTGGGGCTATCTCTCAACCCCTTGAGATACCATTTCGGGAAATAGACTCTATCGTT
____________________________________________________________
consensus GTGCGTGGGGCTATCTCTCAACCCCTTGAGATACCATTTCGGGAAATAGACTCTATCGTT
. : . : . : . : . : . :
JMFS149D12+ AACGGGCTGAAGGCGTATAATTGCGAATGCAACAAGGAATATAAGCGCAGTAAGAATGTT
JMFS089H10+ AACGGGCTGAAGGCGTATAATTGCGAATGCAACAAGGAATATAAGCGCAGTAAGAATGTT
JMFS144D02+ AACGGGCTGAAGGCGTATAATTGCGAATGCAACAAGGAATATAAGCGCAGTAAGAATGTT
JMFF003H01+ AACGGGCTGAAGGCGTATAATTGCGAATGCAACAAGGAATATAAGCGCAGTAAGAATGTT
JMSF009F21+ AGGCGTATAATTGCGAATGCACCAAGGAATATAAGCGCAGTAAGAATGTT
JMFF010D16+ AACGGGCTGAAGGCGTATAATTGCGAATGCAACAAGGAATATAAGCGCAGTAAGAATGTT
____________________________________________________________
consensus AACGGGCTGAAGGCGTATAATTGCGAATGCAACAAGGAATATAAGCGCAGTAAGAATGTT
. : . : . : . : . : . :
JMFS149D12+ AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
JMSF011A23+ TCACTGCGA
JMFS089H10+ AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
JMFS144D02+ AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
JMFF003H01+ AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
JMSF009F21+ AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
JMFF010D16+ AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
____________________________________________________________
consensus AATAGCAGCTGCAAGCCCTATATCTGCAAACGTCGCCATTTTCACGGCTATTCACTGCGA
. : . : . : . : . : . :
JMFS149D12+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
JMSF011A23+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
JMFS089H10+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
JMFS144D02+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
JMFF003H01+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
JMSF009F21+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
JMFF010D16+ AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
____________________________________________________________
consensus AGCAGTAAAGGAGGAAGCAAGGAGCGGAATAGAGCCGTAACGAGAGCCCTCCGATCGAAG
. : . : . : . : . : . :
JMFS149D12+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
JMSF011A23+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
JMFS089H10+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
JMFS144D02+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
JMFF003H01+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
JMSF009F21+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
JMFF010D16+ AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
____________________________________________________________
consensus AGATGAACGAAATCTCAGTGAACCCTCCACTTTGAACTCGAAGCAACGCGAAATACAGCC
. : . : . : . : . : . :
JMFS149D12+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
JMSF011A23+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
JMFS089H10+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
JMFS144D02+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
JMFF003H01+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
JMSF009F21+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
JMFF010D16+ AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
____________________________________________________________
consensus AAATCTCTCTGTAAAAACTCAAGAAACGAATGGTCCCAACAATCTACTATGGCCTCGTTA
. : . : . : . : . : . :
JMFS149D12+ TCAGCAAAGGAGAAAAAGGAGAAGAAA
JMSF011A23+ TCAGCAAAGGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
JMFS089H10+ TCAGCAAAGGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
JMFS144D02+ TCAGCAAAGGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
JMFF003H01+ TCAGCAAAGGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
JMSF009F21+ TCAGCAAAAGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
JMFF010D16+ TCAGCAAAGGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
____________________________________________________________
consensus TCAGCAAAGGAGAAAAAGGAGAAGAAAGAAGAGTGTTTGCTGAGCTTCGAAGAGACTAGA
. : . : . : . : . : . :
JMSF011A23+ AGAAC
JMFS089H10+ AGAACATGGGG
JMFS144D02+ AGAACATGGGGGCGGTGCCGTTCTAAGCGTTT
JMFF003H01+ AGAACATGGGGGCGGTGCCGTTCTAAGCGTTTTTCCTGGGGAACTGAATCTTTATCAC
JMSF009F21+ AGAACATGGGGGCGGTGCCGTTCTAAGCGTTTTTCCTGGGGAACTGAATCTTTATCAC
JMFF010D16+ AGAACATGGGGGCGGTGCCGTTCTAAGCGTTTTTCCTGGGGAACTGAATCTTTATCACAT
____________________________________________________________
consensus AGAACATGGGGGCGGTGCCGTTCTAAGCGTTTTTCCTGGGGAACTGAATCTTTATCACAT