Contig 004481:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009I17Sequence511004481 (3)ref|XP_009624654.1|1e-47PREDICTED: AP-3 complex subunit delta [Nicotiana tomentosiformis]735021238ref|XP_004235755.1|1e-47PREDICTED: AP-3 complex subunit delta [Solanum lycopersicum]
JMFS021C08Sequence483004481 (3)ref|XP_009624654.1|6e-32PREDICTED: AP-3 complex subunit delta [Nicotiana tomentosiformis]
JMFS048C03Sequence352004481 (3)ref|XP_009624654.1|1e-28PREDICTED: AP-3 complex subunit delta [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS021C08+                                                                     CA
                      ____________________________________________________________
consensus                                                                       CA
 
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JMFS021C08+           GGAGGATGGCGTCAGTGGTGGAGGGGTGATAGGAGAGGGTAGCGACTAGGTAGGCGATTG
JMFF009I17+                                                                     TG
                      ____________________________________________________________
consensus             GGAGGATGGCGTCAGTGGTGGAGGGGTGATAGGAGAGGGTAGCGACTAGGTAGGCGATTG
 
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JMFS021C08+           CGCTTGTATAGGAAAGATTGGACGGAGGAGAGCTCGATGGCGTGGAAAGCCGCCCACGAC
JMFF009I17+           CGCTTGTAGAGGAAAGATTGGGCGGAGGAGAGCTCGATGGCGTGGAAAGCCGCCCACGAC
                      ____________________________________________________________
consensus             CGCTTGTATAGGAAAGATTGGGCGGAGGAGAGCTCGATGGCGTGGAAAGCCGCCCACGAC
 
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JMFS021C08+           ATGTGGACGCCGTGTGATGGAGTGGAGGTACGTCAGCTTCTGGAGCGCCGTCGCCTTGGT
JMFS048C03+                          GATGGAGTGGAGGTACGTCAGCTTCTGGAGCGCCGTCGCCTTGGT
JMFF009I17+           ATGTCGACGCCGTG-GATGGAGTGGAGGTACGTCAGCTTCTGGAGCGCCGTCGCCTTGGT
                      ____________________________________________________________
consensus             ATGTGGACGCCGTGTGATGGAGTGGAGGTACGTCAGCTTCTGGAGCGCCGTCGCCTTGGT
 
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JMFS021C08+           ATGAGGATCGGTTGACTTGATCTCGCGGCGGATCTCGTCGACGGCCTTGAATATGAACCC
JMFS048C03+           CTGAGGATCGGTTGACTTGATCTCGCGGCGGATCTCGTCGACGGCCTTGGATATGAACTC
JMFF009I17+           CTGAGGATCGGTTGACTTGATCTCGCGGCGGATCTCGTCGACGGCCTTGGATATGAACCC
                      ____________________________________________________________
consensus             CTGAGGATCGGTTGACTTGATCTCGCGGCGGATCTCGTCGACGGCCTTGGATATGAACCC
 
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JMFS021C08+           CGATTGGCCGGCGCCGCCGCTGAAGAGGCGGATGCCCTTGATTAGGTCATCCAAAGAGCG
JMFS048C03+           CGATTCGCCGGCGCCGCCGCTGAAGAGGCGGATGCCCTTGATTAGGTCATCCAAAGAGCG
JMFF009I17+           CGATTCGCCGGCGCCGCCGCTGAAGAGGCGGATGCCCTTGATTAGGTCATCCAAAGAGCG
                      ____________________________________________________________
consensus             CGATTCGCCGGCGCCGCCGCTGAAGAGGCGGATGCCCTTGATTAGGTCATCCAAAGAGCG
 
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JMFS021C08+           CTGGAAGAGGGATTCCATCAGTGGCGGACCTGCCATTACAATCACCACGTAAAATTCTCT
JMFS048C03+           CTGGAAGAGGGATTCCATCAGTGACGGACCCGCCATTACAATCACCACGTAAAATTCGCT
JMFF009I17+           CTGGAAGAGGGATTCCATCAGTGACGGACCCGCCATTACAATCACCACGTAAAATTCTCT
                      ____________________________________________________________
consensus             CTGGAAGAGGGATTCCATCAGTGACGGACCCGCCATTACAATCACCACGTAAAATTCTCT
 
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JMFS021C08+           CTATCTATCCTTGCACATGGGTATCTATCTATAGGTATATAGATTGGCCGCAGAATTGGG
JMFS048C03+           CTATGAATCCGCGCACATGGGGATCTATCTAAAGGTAGA-AGATTGACCGGAGAATAGGG
JMFF009I17+           CTATCTATCCTTGCACATGGGTATCTATCTATAGGTATATAGATTGACCGGAGAATTGGG
                      ____________________________________________________________
consensus             CTATCTATCCTTGCACATGGGTATCTATCTATAGGTATATAGATTGACCGGAGAATTGGG
 
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JMFS021C08+           CGTCGGAGATGGGATAAGAACGCCGGAATTTGGGTTTTACGCAGACGGGGCCGGT     
JMFS048C03+           CGTCGGAGATGGGATAAGGACGCCGGAA                                
JMFF009I17+           CGTCGGAGATGGGATAAGGACGCCGGAATTTGGGTTTTACGCAGACGGGGCCGGTTGATT
                      ____________________________________________________________
consensus             CGTCGGAGATGGGATAAGGACGCCGGAATTTGGGTTTTACGCAGACGGGGCCGGTTGATT
 
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JMFF009I17+           TTGATTGGGGGGAAATGCCGATTGCCGAAACGGGTTGGGCTGGCGCTAGTCGGGAAGTGT
                      ____________________________________________________________
consensus             TTGATTGGGGGGAAATGCCGATTGCCGAAACGGGTTGGGCTGGCGCTAGTCGGGAAGTGT