| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001O19 | Sequence | 509 | 004480 (7) | ref|XP_009803416.1| | 2e-58 | PREDICTED: cytochrome P450 77A3 [Nicotiana sylvestris] | 695 | 002668 (8) | ref|XP_010316601.1| | 3e-104 | PREDICTED: cytochrome P450 77A1 [Solanum lycopersicum] |
| JMFF009F17 | Sequence | 550 | 004480 (7) | ref|XP_009803416.1| | 6e-69 | PREDICTED: cytochrome P450 77A3 [Nicotiana sylvestris] | 790 | 002668 (8) | ref|XP_010316601.1| | 5e-134 | PREDICTED: cytochrome P450 77A1 [Solanum lycopersicum] |
| JMFF029O16 | Sequence | 509 | 004480 (7) | ref|XP_009803416.1| | 9e-59 | PREDICTED: cytochrome P450 77A3 [Nicotiana sylvestris] | 709 | 002668 (8) | ref|XP_010316601.1| | 1e-109 | PREDICTED: cytochrome P450 77A1 [Solanum lycopersicum] |
| JMFF042P09 | Sequence | 531 | 004480 (7) | ref|XP_009803416.1| | 3e-67 | PREDICTED: cytochrome P450 77A3 [Nicotiana sylvestris] | 543 | 002668 (8) | ref|XP_010316601.1| | 2e-59 | PREDICTED: cytochrome P450 77A1 [Solanum lycopersicum] |
| JMFF046I07 | Sequence | 599 | 004480 (7) | ref|XP_009803416.1| | 5e-84 | PREDICTED: cytochrome P450 77A3 [Nicotiana sylvestris] | 553 | 002668 (8) | ref|XP_010316601.1| | 9e-77 | PREDICTED: cytochrome P450 77A1 [Solanum lycopersicum] |
| JMFF048E18 | Sequence | 346 | 004480 (7) | ref|XP_009803416.1| | 2e-23 | PREDICTED: cytochrome P450 77A3 [Nicotiana sylvestris] | 254 | 002668 (8) | |||
| JMFS008A11 | Sequence | 613 | 004480 (7) | ref|XP_009803416.1| | 2e-88 | PREDICTED: cytochrome P450 77A3 [Nicotiana sylvestris] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS008A11+ CTCCACGTAACCATTTCTAGAAGCTT
JMFF046I07+ AGAAGCTT
____________________________________________________________
consensus CTCCACGTAACCATTTCTAGAAGCTT
. : . : . : . : . : . :
JMFS008A11+ CGTCTCGGATCCTCTTCATATGGTGCTCCATCGCCCACTTCCTTATCCAGCTGCACTGCT
JMFF046I07+ CGTCTCGGATCCTCTTCATATGGTGCTCCATCGCCCACTTCCTTATCCAGCTGCACTGCT
____________________________________________________________
consensus CGTCTCGGATCCTCTTCATATGGTGCTCCATCGCCCACTTCCTTATCCAGCTGCACTGCT
. : . : . : . : . : . :
JMFS008A11+ TGATCCTCGTAGGGTTTATCAGCTCCGTCACGAAGTTCCGCCGCAGCGCTCGCCACAGAG
JMFF046I07+ GATTCCTCGTAGGGTTTATCAGCTCCGTCACGAAGTTCCGCCGCAGCGCTCGCCACAGAG
JMFF001O19+ CGAAGTTCCGCAGCAGCGCTCGCCACAGAG
JMFF042P09+ TAGGGTTTATCAGCTCCGTCACGAAGTTCCGCCGCAGCGCTCGCCACAGAG
JMFF029O16+ GAAGTTCCGCCGCAGCGCTCGCCACAGAG
JMFF009F17+ TCCTCGTAGGGTTTATCAGCTCCGTCACGAAGTTCCGCCGCAGCGCTCGCCACAGAG
____________________________________________________________
consensus TGTTCCTCGTAGGGTTTATCAGCTCCGTCACGAAGTTCCGCCGCAGCGCTCGCCACAGAG
. : . : . : . : . : . :
JMFS008A11+ GCCCGTACTCGGCGGAGTTGATGGCGCATTTTCCGACGCTGAAGATGAGGCGGATGGGCG
JMFF046I07+ GCCCGTACTCGGCGGAGTTGATGGCGCATTTACCGACGCTGAAGATGAGGCGGATGGGCG
JMFF001O19+ GCCCGTACTCGGCGGAGTTGATGGCGCATTTTCCGACGCTGAAGATGAGGCGGATGGGCG
JMFF042P09+ GCCCGTACTCGGCGGAGTTGATGGCGCATTTTCCGACGCTGAAGATGAGGCGGATGGGCG
JMFF029O16+ GCCCGTACTCGGCGGAGTTGATGGCGCATTTTCCGACGCTGAAGATGAGGCGGATGGGCG
JMFF009F17+ GCCCGTACTCGGCGGAGTTGATGGCGCATTTTCCGACGCTGAAGATGAGGCGGATGGGCG
____________________________________________________________
consensus GCCCGTACTCGGCGGAGTTGATGGCGCATTTTCCGACGCTGAAGATGAGGCGGATGGGCG
. : . : . : . : . : . :
JMFS008A11+ AATCCGCCGGACGGTTGGCGAAGATTGGCCCCTGTTGCACCAGAGCTTCATGAATAAGCT
JMFF046I07+ AATCCGCCGGACGGTTGGCGAAGATTGGCCCCTGTTGCACCAGAGCTTCATGAATAAGCT
JMFF001O19+ AATCCGCCGGACGGTTGGCGAAGATTGGCCCCTGTTGCACCAGAGCTTCATGAATAAGCT
JMFF042P09+ AATCCGCCGGACGGTTGGCGAAGATTGGCCCCTGTTGCACCAGAGCTTCATGAATAAGCT
JMFF029O16+ AATCCGCCGGACGGTTGGCGAAGATTGGCCCCTGTTGCACCAGAGCTTCATGAATAAGCT
JMFF009F17+ AATCCGCCGGACGGTTGGCGAAGATTGGCCCCTGTTGCNCCAGAGCTTCATGAATAAGCT
____________________________________________________________
consensus AATCCGCCGGACGGTTGGCGAAGATTGGCCCCTGTTGCACCAGAGCTTCATGAATAAGCT
. : . : . : . : . : . :
JMFS008A11+ CGGAGCTGGTGACGATAACCAGAGTGCGCTGTCCCATTTGCATGGTGAAAATGGGACCGT
JMFF046I07+ CGGAGCTGGTGACGATAACCAGAGTGCGCTGTCCCATTTGCATGGTGAAAATGGGACCGT
JMFF001O19+ CGGAGCTGGTGACGATAACCAGAGTGCGCTGTCCCATTTGCATGGTGAAAATGGGACCGT
JMFF042P09+ CGGAGCTGGTGACGATAACCAGAGTGCGCTGTCCCATTTGCATGGTGAAAATGGGACCGT
JMFF029O16+ CGGAGCTGGTGACGATAACCAGAGTGCGCTGTCCCATTTGCATGGTGAAAATGGGACCGT
JMFF048E18+ ATAACCAGAGTGCGCTGTCCCATTTGCATGGTGAAAATGGGACCGT
JMFF009F17+ CGGAGCTGGTGACGATAACCAGAGTGCGCTGTCCCATTTGCATGGTGAAAATGGGACCGT
____________________________________________________________
consensus CGGAGCTGGTGACGATAACCAGAGTGCGCTGTCCCATTTGCATGGTGAAAATGGGACCGT
. : . : . : . : . : . :
JMFS008A11+ ATTTCTTACGCAAATCACGTACCACGTAGATGAACGGGCGGCGCTGGAGCACGACTTGGA
JMFF046I07+ ATTTCTTACGCAAATCACGTACCACGTAGATGAACGGGCGGCGCTGGAGCACGACTTGGA
JMFF001O19+ ATTTNTTACGCAAATCACGTACCACGTAGATGAACGGGCGGCGCTGGAGCACGACTTGGA
JMFF042P09+ ATTTCTTACGCAAATCACGTACCACGTAGATGAACGGGCGGCGCTGGAGCACGACTTGGA
JMFF029O16+ ATTTNTTACGCAAATCACGTNCCACGTAGATGAACGGGCGGCGCTGGAGCACGACTTGGA
JMFF048E18+ ATTTCTTACGCAAATCACGTACCACGTAGATGAACGGGCGGCGCTGGAGCACGACTTGGA
JMFF009F17+ ATTTNTTACGCAAATCACGTACCACGTAGATGAACGGGCGGCGCTGGAGCACGACTTGGA
____________________________________________________________
consensus ATTTCTTACGCAAATCACGTACCACGTAGATGAACGGGCGGCGCTGGAGCACGACTTGGA
. : . : . : . : . : . :
JMFS008A11+ ACAGATTCCCTACTAGCGGCCAACCCGGCGGCCCCGGCGGGAGATTCTTCGGACCGCCGC
JMFF046I07+ ACAGATTCCCTACTAGCGGCCAACCCGGCGGCCCCGGCGGGAGATTCTTCGGACCGCCGC
JMFF001O19+ ACAGATTCCCTACTAGCGGCCAACCCGGCGGCCCCGGCGGGAGATTNTTCGGACCGCCGC
JMFF042P09+ ACAGATTCCCTACTAGCGGCCAACCCGGCGGCCCCGGCGGGAGATTCTTCGGACCGCCGC
JMFF029O16+ ACAGATTCCCTACTAGCGGCCAACCCGGCGGCCCCGGCGGGAGATTNTTCGGACCGCCGC
JMFF048E18+ ACAGATTCCCTACTAGCGGCCAACCCGGCGGCCCCGGCGGGAGATTCTTCGGACCGCCGC
JMFF009F17+ ACAGATTCCCTACTAGCGGCCAACCCGGCGGCCCCGGCGGGAGATTNTTCGGACCGCCGC
____________________________________________________________
consensus ACAGATTCCCTACTAGCGGCCAACCCGGCGGCCCCGGCGGGAGATTCTTCGGACCGCCGC
. : . : . : . : . : . :
JMFS008A11+ CGGTGACAGACCAGTAGCGCCACCACAGGCATAGGAAGACCGTGGCCAACAAAAGTATTG
JMFF046I07+ CGGTGACAGACCAGTAGCGCCACCACAGGCATAGGAAGACCGTGGCCAACAAAAGTATTG
JMFF001O19+ CGGTGACAGACCAGTAGCGCCNCCACAGGCATAGGAAGACCGTGGCCAACAAAAGTATTG
JMFF042P09+ CGGTGACAGACCAGTAGCGCCACCACAGGCATAGGAAGACCGTGGCCAACAAAAGTATTG
JMFF029O16+ CGGTGACAGACCAGTAGCGCCNCCACAGGCATAGGAAGACCGTGGCCAACAAAAGTATTG
JMFF048E18+ CGGTGACAGACCAGTAGCGCCACCACAGGCATAGGAAGACCGTGGCCAACAAAAGTATTG
JMFF009F17+ CGGTGACAGACCAGTAGCGCCNCCACAGGCATAGGAAGACCGTGGCCAACAAAAGTATTG
____________________________________________________________
consensus CGGTGACAGACCAGTAGCGCCACCACAGGCATAGGAAGACCGTGGCCAACAAAAGTATTG
. : . : . : . : . : . :
JMFS008A11+ CAGCGTCCATTAACTCCATAGCGTGATTTCCTTTTTTATCTTTTTTTTTTCTCCTTCAAA
JMFF046I07+ CAGCGTCCATTAACTCCATAGCGTGATTTCCTTTTTTATCTTTTTTTTTTCTCCTTCAAA
JMFF001O19+ CAGCGTCCATTAACTCCATAGCGTGATTTCCTTTTTTATCTTTTTTTTTTCTCCTTCAAA
JMFF042P09+ CAGCGTCCATTAACTCCATAGCGTGATTTCCTTTTTTATCTTTTTTTTTTCTCCTTCAAA
JMFF029O16+ CAGCGTCCATTAACTCCATAGCGNGATTTCCTTTTTTATCTTTTTTTTTTCTCCTTCAAA
JMFF048E18+ CAGCGTCCATTAACTCCATAGCGTGATTTCCTTTTTTATCTTTTTTTTTTCTCCTTCAAA
JMFF009F17+ CAGCGTCCATTAACTCCATAGCGTGATTTCCTTTTTTATCTTTTTTTTTTCTCCTTCAAA
____________________________________________________________
consensus CAGCGTCCATTAACTCCATAGCGTGATTTCCTTTTTTATCTTTTTTTTTTCTCCTTCAAA
. : . : . : . : . : . :
JMFS008A11+ TTTTTAAAATGAAAGGGAGAATTTCAATTCTCTTTTACTTTGTTTGG
JMFF046I07+ TTTTTAAAATGAAAGGGAGAATTTCAATTCTCTTTTACTTTGTTTGGTTGT
JMFF001O19+ TTTTTAAAATGAAAGGGAGAATTTCAATTCTCTTTTACTTTGTTTGGTTGTAGGGATAT
JMFF042P09+ TTTTTAAAATGAAAGGGAGAATTTCAATTCTCTTTTACTTTGTTTGGTTGTAGGGATATT
JMFF029O16+ TTTTTAAAATGAAAGGGAGAATTTCAATTCTCTTTTACTTTGTTTGGTTGTAGGGATATT
JMFF048E18+ TTTTTAAAATGAAAGGGAGAATTTCAATTCTCTTTTACTTTGTTTGGTTGTAGGGATATT
JMFF009F17+ TTTTTAAAATGAAAGGGAGAATTTCAATTCTCTTTTACTTTGTTTGGTTGTAGGGATATT
____________________________________________________________
consensus TTTTTAAAATGAAAGGGAGAATTTCAATTCTCTTTTACTTTGTTTGGTTGTAGGGATATT