| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008M03 | Sequence | 597 | 004478 (4) | ref|XP_009770416.1| | 4e-74 | PREDICTED: monothiol glutaredoxin-S17 [Nicotiana sylvestris] | 112 | 020154 | |||
| JMFF027D18 | Sequence | 480 | 004478 (4) | ref|XP_009612933.1| | 3e-67 | PREDICTED: monothiol glutaredoxin-S17 [Nicotiana tomentosiformis] | 729 | 006872 (2) | gb|ABK94877.1| | 2e-99 | unknown [Populus trichocarpa] |
| JMFS059E05 | Sequence | 627 | 004478 (4) | ref|XP_009770416.1| | 9e-89 | PREDICTED: monothiol glutaredoxin-S17 [Nicotiana sylvestris] | |||||
| JMSF048G02 | Sequence | 625 | 004478 (4) | ref|XP_009770416.1| | 1e-90 | PREDICTED: monothiol glutaredoxin-S17 [Nicotiana sylvestris] | 730 | 006872 (2) | ref|XP_009612933.1| | 2e-79 | PREDICTED: monothiol glutaredoxin-S17 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF048G02+ TTCAACAACTTTTTTG
____________________________________________________________
consensus TTCAACAACTTTTTTG
. : . : . : . : . : . :
JMSF048G02+ CTAAACCCACATTTAGGTTCTCCAGGACTTCCTTTCATAAACAGCATGACTGGGTGGGAA
JMFS059E05+ TAAACCCACATTTAGGTTCTCCAGGACTTCCTTTCATAAACAGCATGACTGGGTGGGAA
____________________________________________________________
consensus CTAAACCCACATTTAGGTTCTCCAGGACTTCCTTTCATAAACAGCATGACTGGGTGGGAA
. : . : . : . : . : . :
JMSF048G02+ TTAATTAGCTGACCTAGTCGAGTTTTCAGTCCATCGCTAAGTCCAGAGGGTGCTTGGCTC
JMFS059E05+ TTAATTAGCTGACCTAGTCGAGTTTTCAGTCCATCGCTAAGTCCAGAGGGTGCTTGGCTC
JMFF008M03+ ATTAGCTGACCTAGTCGAGTTTTCAGTCCATCGCTAAGTCCAGAGGGTGCTTGGCTC
____________________________________________________________
consensus TTAATTAGCTGACCTAGTCGAGTTTTCAGTCCATCGCTAAGTCCAGAGGGTGCTTGGCTC
. : . : . : . : . : . :
JMSF048G02+ TCAACTTGAGAAGCGCCATTGTTCTTAACAAGATTTTGTACTGTCTCAATAATAGTTGGC
JMFF027D18+ ACAAGATTTTGTACTGTCTCAATAATAGTTGGC
JMFS059E05+ TCAACTTGAGAAGCGCCATTGTTCTTAACAAGATTTTGTACTGTCTCAATAATAGTTGGC
JMFF008M03+ TCAACTTGAGAAGCGCCATTGTTCTTAACAAGATTTTGTACTGTCTCAATAATAGTTGGC
____________________________________________________________
consensus TCAACTTGAGAAGCGCCATTGTTCTTAACAAGATTTTGTACTGTCTCAATAATAGTTGGC
. : . : . : . : . : . :
JMSF048G02+ CCAGCAGCCATTCNTAGGCTAGCAGGAGCAGCAGGTTCTCCAGGAGTTATTTGCCCATAA
JMFF027D18+ CCAGCAGCCATTCCTAGGCTAGCAGGAGCAGCAGGTTCTCCAGGAGTTATTTGCCCATAA
JMFS059E05+ CCAGCAGCCATTCCTAGGCTAGCAGGAGCAGCAGGTTCTCCAGGAGTTATTTGCCCATAA
JMFF008M03+ CCAGCAGCCATTCNTAGGCTAGCAGGAGCAGCAGGTTCTCCAGGAGTTATTTGCCCATAA
____________________________________________________________
consensus CCAGCAGCCATTCCTAGGCTAGCAGGAGCAGCAGGTTCTCCAGGAGTTATTTGCCCATAA
. : . : . : . : . : . :
JMSF048G02+ ATTTTGGAAACCTTGTTGGCCAAAGCAGATGGATCAGCACCATCCAATGTATCAACGGTT
JMFF027D18+ ATTTTGGAAACCTTGTTGGCCAAAGCAGATGGATCCGCACCATCCAATGTATCAACGGTT
JMFS059E05+ ATTTTGGAAACCTTGTTGGCCAAAGCAGATGGATCAGCACCATCCAATGTATCAACGGTT
JMFF008M03+ ATTTTGGAAACCTTGTTGGCCAAAGCAGATGGATCAGCACCATCCAATGTATCAACGGTT
____________________________________________________________
consensus ATTTTGGAAACCTTGTTGGCCAAAGCAGATGGATCAGCACCATCCAATGTATCAACGGTT
. : . : . : . : . : . :
JMSF048G02+ TTACCATCCTTGAAGAAAACAAAATAAGGAACTGCAGACACTGAATATGCCTCTGAAATT
JMFF027D18+ TTACCATCCTTGAAGAAAACAAAATAAGGAACTGCAGACACTGAATATGCCTCTGAAATT
JMFS059E05+ TTACCATCCTTGAAGAAAACAAAATAAGGAACTGCAGACACTGAATATGCCTCTGAAATT
JMFF008M03+ TTACCATCCTTGAAGAAAACAAAATAAGGAACTGCAGACACTGAATATGCCTCTGAAATT
____________________________________________________________
consensus TTACCATCCTTGAAGAAAACAAAATAAGGAACTGCAGACACTGAATATGCCTCTGAAATT
. : . : . : . : . : . :
JMSF048G02+ TCTGGTTGTTCTTCAGCTTCAACCCTGAGGAAGTGGGCATGAGGGAAATCAGTGGAGAGG
JMFF027D18+ TCTGGTTGTTCTTCAGCTTCAACCCTGAGGAAGTGGGCATGAGGGAAATCAGTGGAGAGG
JMFS059E05+ TCTGGTTGTTCTTCAGCTTCAACCCTGAGGAAGTGGGCATGAGGGAAATCAGTGGAGAGG
JMFF008M03+ TCTGGTTGTTCTTCAGCTTCAACCCTGAGGAAGTGGGCATGAGGGAAATCAGTGGAGAGG
____________________________________________________________
consensus TCTGGTTGTTCTTCAGCTTCAACCCTGAGGAAGTGGGCATGAGGGAAATCAGTGGAGAGG
. : . : . : . : . : . :
JMSF048G02+ TGGGAGAAGACTTGGTCCATGTGCTTGGAAGCCTCGCACCAAGTCGCCCAGAAGTGCACA
JMFF027D18+ TGGGAGAAGACTTGGTCCATGTGCTTGGAAGCCTCGCACCAAGTCGCCCAGAAGTGCACA
JMFS059E05+ TGGGAGAAGACTTGGTCCATGTGCTTGGAAGCCTCGCACCAAGTCGCCCAGAAGTGCACA
JMFF008M03+ TGGGAGAAGACTTGGTCCATGTGCTTGGAAGCCTCGCACCAAGTCGCCCAGAAGTGCACA
____________________________________________________________
consensus TGGGAGAAGACTTGGTCCATGTGCTTGGAAGCCTCGCACCAAGTCGCCCAGAAGTGCACA
. : . : . : . : . : . :
JMSF048G02+ ACCGCCGGCGACCCATCGGCGACAAGTTTCACAAGTTCTTCCTTCGATTCCAATTCCTTT
JMFF027D18+ ACCGCCGGCGACCCATCGGCGACAAGTTTCACAAGTTCTTCCTTCGATTCCAATTCCTTT
JMFS059E05+ ACCGCCGGCGACCCATCGGCGACAAGTTTCACAAGTTCTTCCTTCGATTCCAATTCCTTT
JMFF008M03+ ACCGCCGGCGACCCATCGGCGACAAGTTTCACAAGTTCTTCCTTCGATTCCAATTCCTTT
____________________________________________________________
consensus ACCGCCGGCGACCCATCGGCGACAAGTTTCACAAGTTCTTCCTTCGATTCCAATTCCTTT
. : . : . : . : . : . :
JMSF048G02+ ACCCCACCCATTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCCCAGTGAGCAC
JMFF027D18+ ACCCCACCCATTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCCCAGTGAGCAC
JMFS059E05+ ACCCCACCCATTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCCCAGTGAGCAC
JMFF008M03+ ACCCCACCCATTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCCCAGTGAGCAC
____________________________________________________________
consensus ACCCCACCCATTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTCTCTCTCCCAGTGAGCAC
. : . : . : . : . : . :
JMSF048G02+ TGAACACC
JMFF027D18+ TGAACACCGATAGACTCCGACGG
JMFS059E05+ TGAACACCGATAGACTCCGACGG
JMFF008M03+ TGAACACCGATAGACTCCGACGGGGATGGAATCTGCTTCTGCGTGTTGCGTGCGTTTAAT
____________________________________________________________
consensus TGAACACCGATAGACTCCGACGGGGATGGAATCTGCTTCTGCGTGTTGCGTGCGTTTAAT