Contig 004466:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF006K02+                                            AAGCTCCACTCTTCGGACGTCAATGG
JMFF006K02-                                             AAGCTCCACTCTTCGGACGTCAATGG
                      ____________________________________________________________
consensus                                               AAGCTCCACTCTTCGGACGTCAATGG
 
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rJMFF006K02+          AGGAGTATTATTTACTTTCAACTTCATCTTTGAACTACCTCTGTTTATTCTTTCTACGCC
JMFF006K02-           AGGAGTATTATTTACTTTCAACTTCATCTTTGAACTACCTCTGTTTATTCTTTCTACGCC
                      ____________________________________________________________
consensus             AGGAGTATTATTTACTTTCAACTTCATCTTTGAACTACCTCTGTTTATTCTTTCTACGCC
 
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rJMFF006K02+          CTATTTCCGCCATCATCTTTGTCCTCTCTTTACTCCTCTTTGGTTGGTTTTTGGCTTGGA
JMFF006K02-           CTATTTCCGCCATCATCTTTGTCCTCTCTTTACTCCTCTTTGGTTGGTTTTTGGCTTGGA
                      ____________________________________________________________
consensus             CTATTTCCGCCATCATCTTTGTCCTCTCTTTACTCCTCTTTGGTTGGTTTTTGGCTTGGA
 
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rJMFF006K02+          AGTTAGTGTTGGTTCATGTTCCACTTGTCCAAGAAATCTTTGGGTTGAGGAAAAAACCCG
JMFF006K02-           AGTTAGTGTTGGTTCATGTTCCACTTGTCCAAGAAATCTTTGGGTTGAGGAAAAAACCCG
                      ____________________________________________________________
consensus             AGTTAGTGTTGGTTCATGTTCCACTTGTCCAAGAAATCTTTGGGTTGAGGAAAAAACCCG
 
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rJMFF006K02+          TCAAACCAAAACCTGAAAATCGCCGGCGATTCACTCAATTTTACAACGACATGGATGCCC
JMFF006K02-           TCAAACCAAAACCTGAAAATCGCCGGCGATTCACTCAATTTTACAACGACATGGATGCCC
                      ____________________________________________________________
consensus             TCAAACCAAAACCTGAAAATCGCCGGCGATTCACTCAATTTTACAACGACATGGATGCCC
 
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rJMFF006K02+          GGACTTCTGCTTCTCTATGAGTTACCAGTCGCCATGGATGCAAAAGCTGCAGTGTGCCAG
JMFF006K02-           GGACTTCTGCTTCTCTATGAGTTACCAGTCGCCATGGATGCAAAAGCTGCAGTGTGCCAG
                      ____________________________________________________________
consensus             GGACTTCTGCTTCTCTATGAGTTACCAGTCGCCATGGATGCAAAAGCTGCAGTGTGCCAG
 
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rJMFF006K02+          TGCTAGGTCCCCAGATTCTTGTAGAAATCTCAGTCTTGATTGCATCTAAAAGGGCTAATA
JMFF006K02-           TGCTAGGTCCCCAGATTCTTGTAGAAATCTCAGTCTTGATTGCATCTAAAAGGGCTAATA
                      ____________________________________________________________
consensus             TGCTAGGTCCCCAGATTCTTGTAGAAATCTCAGTCTTGATTGCATCTAAAAGGGCTAATA
 
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rJMFF006K02+          GAAGCTGATGGCTCCTATATCAGGTTAGAGAGGGTCTAAGATTCTGGGTGCGATACTTCA
JMFF006K02-           GAAGCTGATGGCTCCTATATCAGGTTAGAGAGGGTCTAAGATTCTGGGTGCGATACTTCA
                      ____________________________________________________________
consensus             GAAGCTGATGGCTCCTATATCAGGTTAGAGAGGGTCTAAGATTCTGGGTGCGATACTTCA
 
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rJMFF006K02+          GTTCTTTGTACAGATTTCAGTTATGATTTTCATCATCAATGCATGTATGTACAGTTGTAA
JMFF006K02-           GTTCTTTGTACAGATTTCAGTTATGATTTTCATCATCAATGCATGTATGTACAGTTGTAA
                      ____________________________________________________________
consensus             GTTCTTTGTACAGATTTCAGTTATGATTTTCATCATCAATGCATGTATGTACAGTTGTAA
 
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rJMFF006K02+          TGCGTTTTCTAGGTCAGGTTTAAAATATGGATGATT                        
JMFF006K02-           TGCGTTTTCTAGGTCAGGTTTAAAATATGGATGATTTGGATTGGTTTTTCTTTGCTGCCA
                      ____________________________________________________________
consensus             TGCGTTTTCTAGGTCAGGTTTAAAATATGGATGATTTGGATTGGTTTTTCTTTGCTGCCA