Contig 004465:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006G17+                        TATCTGTTTTCCAGTTTCAACATCCCAAGCTCTCAGAGTCTTGTCAG
                      ____________________________________________________________
consensus                          TATCTGTTTTCCAGTTTCAACATCCCAAGCTCTCAGAGTCTTGTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006G17+           GGCTTGCCGATATTATGGCTGACCCATCAGTCATCCACTGAACATCCAGAACAGCATTNT
                      ____________________________________________________________
consensus             GGCTTGCCGATATTATGGCTGACCCATCAGTCATCCACTGAACATCCAGAACAGCATTNT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005E24+                                                GTATACATTCCAAAGAAAAATTT
JMFF006G17+           TGTGCCCTTTTAACACCATAAAGTTTTTGCATTCACCGTATACATTCCAAAGAAAAATTT
                      ____________________________________________________________
consensus             TGTGCCCTTTTAACACCATAAAGTTTTTGCATTCACCGTATACATTCCAAAGAAAAATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005E24+           CTTTATCATGTGAACCAGATGCAATTACAGTTCCTGCAGCATTGAACTTCATTGTGTATA
JMFF006G17+           NTTTATCATGTGAACCAGATGCAATTACAGTTCCTGCAGCATTGAACTTCATTGTGTATA
                      ____________________________________________________________
consensus             CTTTATCATGTGAACCAGATGCAATTACAGTTCCTGCAGCATTGAACTTCATTGTGTATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005E24+           TGGCACTTTGATGTCCTGTTAGTAACATGATTGGAGATTCCAAGCCGGATGTTCGCTGTT
JMFF006G17+           TGGCACTTTGATGTCCTGTTAGTAACATGATTGGAGATTCCAAGCCGGATGTTCGCTGTT
                      ____________________________________________________________
consensus             TGGCACTTTGATGTCCTGTTAGTAACATGATTGGAGATTCCAAGCCGGATGTTCGCTGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005E24+           TCCCATTTGGTCCAGGTGCTTTAGGACCACTGAAAGGAACAGACAGTTCCATTGGTCTTG
JMFF006G17+           TCCCATTTGGTCCAGGTGCTTTAGGACCNCTGAAAGGAACAGACAGTTCCATTGGTNTTG
                      ____________________________________________________________
consensus             TCCCATTTGGTCCAGGTGCTTTAGGACCACTGAAAGGAACAGACAGTTCCATTGGTCTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005E24+           GACCAATGACAGACAAAGCACTTTCTGTTTGCATTCTTCTTTTTTCTTCTATTCGATCTT
JMFF006G17+           GACCAATGACAGACAAAGCACTTTCTGTTTGCATTCTTCTTTTTTCTTCTATTCGATCTT
                      ____________________________________________________________
consensus             GACCAATGACAGACAAAGCACTTTCTGTTTGCATTCTTCTTTTTTCTTCTATTCGATCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005E24+           CAGTATTTGAAAAGCAGTATCTGTCAG-----CTTGATTACTAATAGGGCTTCGACCACC
JMFF006G17+           CAGTATTTGAAAAGCAGTATCTGTCAGCTGGACTTGATTACTAATAGGGCTTCGACCACC
                      ____________________________________________________________
consensus             CAGTATTTGAAAAGCAGTATCTGTCAGCTGGACTTGATTACTAATAGGGCTTCGACCACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF005E24+           GTAAAACCCTAGGGTTCTTCTTCAAGAGACCAGGTGGAGAAGCAAAGACGTCAGT     
JMFF006G17+           GTAAAACCCTAGGGTTNTTNTTCAAGAGA-CAGGTGGAGAAGCAAAGACGTCAGTGTCTC
                      ____________________________________________________________
consensus             GTAAAACCCTAGGGTTCTTCTTCAAGAGACCAGGTGGAGAAGCAAAGACGTCAGTGTCTC