Contig 004456:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF045G04+                         GTATCAGGCATTGGGCTGATATCCTGACTAAACCGGTTGATTCTGA
                      ____________________________________________________________
consensus                           GTATCAGGCATTGGGCTGATATCCTGACTAAACCGGTTGATTCTGA
 
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JMFF045G04+           AGGCACCNCAATACCAAAGTGACCTGATTCCGAAGCACTTGCAGAGGGTCCTAATGGAGG
JMFF017M19+                                        CCGAAGCACTTGCAGAGGGTCCTAATGGAGG
JMFF004K07+                                                                   GAGG
                      ____________________________________________________________
consensus             AGGCACCNCAATACCAAAGTGACCTGATTCCGAAGCACTTGCAGAGGGTCCTAATGGAGG
 
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JMFF045G04+           CAAATTGAATGATCCAGAAGGCTCTGGCTTCCCACTGAAACCACTACCAGGCTGCGAAAA
JMFF017M19+           CAAATTGAATGATCCAGAAGGCTCTGGCTTCCCACTGAAACCACTACCAGGCTGCGAAAA
JMFF004K07+           CAAATTGAATGATCCAGAAGGCTNTGGCTTCCCACTGAAACCACTACCAGGCTGCGAAAA
                      ____________________________________________________________
consensus             CAAATTGAATGATCCAGAAGGCTCTGGCTTCCCACTGAAACCACTACCAGGCTGCGAAAA
 
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JMFF045G04+           AAGCGAATATCTCCCTGATGGAGGCAATAAACCCCCTCCAAGGGCTGGAGATTTATCCTT
JMFF017M19+           AAGCGAATATCTCCCTGATGGAGGCAATAAACCCCCTCCAAGGGCTGGAGATTTATCCTT
JMFF004K07+           AAGCGAATATCTCCCTGATGGAGGCAATAAACCCCCTCCAAGGGCTGGAGATTTATCCTT
                      ____________________________________________________________
consensus             AAGCGAATATCTCCCTGATGGAGGCAATAAACCCCCTCCAAGGGCTGGAGATTTATCCTT
 
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JMFF045G04+           ATCCATGTATTAAGTCCTCAAACACCCACACAACCACTTGAGCTTATTAACCTAATGAAC
JMFF017M19+           ATCCATGTATTAAGTCCTCAAACACCCACACAACCACTTGAGCTTATTAACCTAATGAAC
JMFF004K07+           ATCCATGTATTAAGTCCTCAAACACCCACACAACCACTTGAGCTTATTAACCTAATGAAC
                      ____________________________________________________________
consensus             ATCCATGTATTAAGTCCTCAAACACCCACACAACCACTTGAGCTTATTAACCTAATGAAC
 
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JMFF045G04+           CCCCAATGCCTGATTTGGGAGCCCCTGATAAATACTAAAACACTTGAAGCAAAGAAACAA
JMFF017M19+           CCCCAATGCCTGATTTGGGAGCCCCTGATAAATACTAAAACACTTGAAGCAAAGAAACAA
JMFF004K07+           CCCCAATGCCTGATTTGGGAGCCCCTGATAAATACTAAAACACTTGAAGCAAAGAAACAA
                      ____________________________________________________________
consensus             CCCCAATGCCTGATTTGGGAGCCCCTGATAAATACTAAAACACTTGAAGCAAAGAAACAA
 
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JMFF045G04+           AAGATGAACTCAAACAACTCAGCTCAAGAAGAAGTGTTTCTTTTCACCAATATATCAAAA
JMFF017M19+           AAGATGAACTCAAACAACTCAGCTCAAGAAGAAGTGTTTCTTTTCACCAATATATCAAAA
JMFF004K07+           AAGATGAACTCAAACAACTCAGCTCAAGAAGAAGTGTTTCTTTTCACCAATATATCAAAA
JMFF004K01+                                                            ATATATCAAAA
                      ____________________________________________________________
consensus             AAGATGAACTCAAACAACTCAGCTCAAGAAGAAGTGTTTCTTTTCACCAATATATCAAAA
 
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JMFF045G04+           GATTTCCAACTACAGTTAAGCATTAAAATACTAAAGTAATAGCTACAAAGACAACCCTTA
JMFF017M19+           GATTTCCAACTACAGTTAAGCATTAAAATACTAAAGTAATAGCTACAAAGACAACCCTTA
JMFF004K07+           GATTTCCAACTACAGTTAAGCATTAAAATACTAAAGTAATAGCTACAAAGACAACCCTTA
JMFF004K01+           GATTTCCANCTNCAGTTAAGCATTAAAATANTAAAGTAATAGCTACAAAGACAACCCTTA
                      ____________________________________________________________
consensus             GATTTCCAACTACAGTTAAGCATTAAAATACTAAAGTAATAGCTACAAAGACAACCCTTA
 
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JMFF045G04+           CAAAACATACATATAGGCATAGATAGATAAATGTTCCGCAAGATACGTCTCCCAATGAAT
JMFF017M19+           CAAAACATACATATAGGCATAGATAGATAAATGTTCCGCAAGATACGTCTCCCAATGAAT
JMFF004K07+           CAAAACATACATATAGGCATAGATAGATAAATGTTCCGCAAGATACGTCTCCCAATGAAT
JMFF004K01+           CAAAACATACATATAGGCATAGATAGATAAATGTTCCGCAAGATACGTCTCCCAATGAAT
                      ____________________________________________________________
consensus             CAAAACATACATATAGGCATAGATAGATAAATGTTCCGCAAGATACGTCTCCCAATGAAT
 
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JMFF045G04+           TCTCCTGAAACCCAGCCACGAATGTGTTCCTTATTATGAGATTAGATCTCCAGAAAAAGA
JMFF017M19+           TCTCCTGAAACCCAGCCACGAATGTGTTCCTTATTATGAGATTAGATCTCCAGAAAAAGA
JMFF004K07+           TCTCCTGAAACCCAGCCACGAATGTGTTCCTTATTATGAGATTAGATCTCCAGAAAAAGA
JMFF004K01+           TCTCCTGAAACCCAGCCACGAATGTGTTCCTTATTATGAGATTAGATCTCCAGAAAAAGA
                      ____________________________________________________________
consensus             TCTCCTGAAACCCAGCCACGAATGTGTTCCTTATTATGAGATTAGATCTCCAGAAAAAGA
 
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JMFF045G04+           ACTGAGAAAAATGGGAACTTTTCACATGGCAGAGAGGGAGGGAGAAAGAGAGAAA     
JMFF017M19+           ACTGAGAAAAATGGGAACTTTTCACATGGCAGAGAGGGAGGGAGAAAGAGAGAAA     
JMFF004K07+           ACTGAGAAAAATGGGAACTTTTCACATGGCAGAGAGGGAGGGAGAAAGAGAGAAA     
JMFF004K01+           ACTGAGAAAAATGGGAACTTTTCACATGGCAGAGAGGGAGGGAGAAAGAGAGAAAGAGAG
                      ____________________________________________________________
consensus             ACTGAGAAAAATGGGAACTTTTCACATGGCAGAGAGGGAGGGAGAAAGAGAGAAAGAGAG