Contig 004447:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002N05Sequence556004447 (4)ref|XP_009613479.1|4e-50PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]711005480 (2)ref|XP_006357406.1|7e-58PREDICTED: subtilisin-like protease-like [Solanum tuberosum]
JMFF017J09Sequence578004447 (4)ref|XP_009613479.1|5e-56PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]
JMFF032J16Sequence550004447 (4)ref|XP_010322825.1|3e-50PREDICTED: subtilisin-like protease [Solanum lycopersicum]
JMFF038B24Sequence457004447 (4)ref|XP_006342924.1|5e-59PREDICTED: subtilisin-like protease-like [Solanum tuberosum]743005480 (2)ref|XP_010322825.1|9e-53PREDICTED: subtilisin-like protease [Solanum lycopersicum]

Alignment

This contig is upended


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JMFF038B24+                                                                   CTGC
                      ____________________________________________________________
consensus                                                                     CTGC
 
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JMFF038B24+           ATCGCACCAAAAGCTCCAATCGCCACGGAATCGGTATAGTAGGGCCCAGGGGAGGTACGT
                      ____________________________________________________________
consensus             ATCGCACCAAAAGCTCCAATCGCCACGGAATCGGTATAGTAGGGCCCAGGGGAGGTACGT
 
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JMFF038B24+           CCAATAGAGAGAGAAAGCACGTCCACGCCGTCTTCAACAGCTTTATCCATGGCAGCGAGA
                      ____________________________________________________________
consensus             CCAATAGAGAGAGAAAGCACGTCCACGCCGTCTTCAACAGCTTTATCCATGGCAGCGAGA
 
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JMFF038B24+           ATATCGGCACGGGAACAGCCTGAATTCCAACAAACTTTGTAAGAAGCTATCCTGGCTCTT
                      ____________________________________________________________
consensus             ATATCGGCACGGGAACAGCCTGAATTCCAACAAACTTTGTAAGAAGCTATCCTGGCTCTT
 
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JMFF038B24+           ATCGCCATGCCTCTGGCTTCTCCCGGCGCGTATCCCGCAAAGCTGGCGTTTGCAACAATA
                      ____________________________________________________________
consensus             ATCGCCATGCCTCTGGCTTCTCCCGGCGCGTATCCCGCAAAGCTGGCGTTTGCAACAATA
 
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JMFF038B24+           GATCCGGCCGCAATAGAGGCACAAATCGTGCCATGCCCATTCGTATCCCTCGGCGAAATC
                      ____________________________________________________________
consensus             GATCCGGCCGCAATAGAGGCACAAATCGTGCCATGCCCATTCGTATCCCTCGGCGAAATC
 
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JMFF038B24+           GACTCCACCGATGCATCCATTGCTCTTCCCAGAAAAGCCTCGTAAGCGTCGTAAAAAGCA
                      ____________________________________________________________
consensus             GACTCCACCGATGCATCCATTGCTCTTCCCAGAAAAGCCTCGTAAGCGTCGTAAAAAGCA
 
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JMFF038B24+           CGAGCACCAATGAGTTTCTGATTACACGACGTCGCCGGAAAATCTGGAGCAACCTCGCAC
JMFF002N05+                                                       TGGAGCAACCTCGCAC
                      ____________________________________________________________
consensus             CGAGCACCAATGAGTTTCTGATTACACGACGTCGCCGGAAAATCTGGAGCAACCTCGCAC
 
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JMFF038B24+           GCGCCCTTCCAGCGGGAAGGAAAGGGAGATAGA                           
JMFF017J09+             GCCCTTCCAGCGGGAAGGAAAGGGAGATAGACCCTCGTCAGAGAAGCTGCGACTCTCC
JMFF032J16+             GCCCTTCCAGCGGGAAGGAAAGGGAGATAGACCCTCGTCAGAGAAGCTGCGACTCTCC
JMFF002N05+           GCGCCCTTCCAGCGGGAAGGAAAGGGAGATAGACCCTCGTCAGAGAAGCTGCGACTCTCC
                      ____________________________________________________________
consensus             GCGCCCTTCCAGCGGGAAGGAAAGGGAGATAGACCCTCGTCAGAGAAGCTGCGACTCTCC
 
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JMFF017J09+           GGCCAGATTCCGGTGTCGAGAACACCCACTATAACATCATCTGCGTAATTAGAGTCGGGC
JMFF032J16+           GGCCAGATTCCGGTGTCGAGAACACCCACTATAACATCATCTGCGTAATTAGAGTCGGGC
JMFF002N05+           GGCCAGATTCCGGTGTCGAGAACACCCACTATAACATCATCTGCGTAATTAGAGTCGGGC
                      ____________________________________________________________
consensus             GGCCAGATTCCGGTGTCGAGAACACCCACTATAACATCATCTGCGTAATTAGAGTCGGGC
 
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JMFF017J09+           CAGAGACCAGACGACTCAGCTAAGCCTAAAAATTGAGGGGACTGAGTGGTTTGGGGCTGG
JMFF032J16+           CAGAGACCAGACGACTCAGCTAAGCCTAAAAATTGAGGGGACTGAGTGGTTTGGGGCTGG
JMFF002N05+           CAGAGACCAGACGACTCAGCTAAGCCTAAAAATTGAGGGGACTGAGTGGTTTGGGGCTGG
                      ____________________________________________________________
consensus             CAGAGACCAGACGACTCAGCTAAGCCTAAAAATTGAGGGGACTGAGTGGTTTGGGGCTGG
 
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JMFF017J09+           AGGATTTGGTCTTCAAGGACAGAGATCACGCCGGGGATGTTTCGTAGCTCCGACGCTTGG
JMFF032J16+           AGGATTTGGTCTTCAAGGACAGAGATCACGCCGGGGATGTTTCGTAGCTCCGACGCTTGG
JMFF002N05+           AGGATTTGGTCTTCAAGGACAGAGATCACGCCGGGGATGTTTCGTAGCTCCGACGCTTGG
                      ____________________________________________________________
consensus             AGGATTTGGTCTTCAAGGACAGAGATCACGCCGGGGATGTTTCGTAGCTCCGACGCTTGG
 
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JMFF017J09+           GAGGGCGTCAGGCGAGCACAAAAGCCGTGGGCAACGCGGTCATAGGTGTACAAAAGCTCA
JMFF032J16+           GAGGGCGTCAGGCGAGCACAAAAGCCGTGGGCAACGCGGTCATAGGTGTACAAAAGCTCA
JMFF002N05+           GAGGGCGTCAGGCGAGCACAAAAGCCGTGGGCAACGCGGTCATAGGTGTACAAAAGCTCA
                      ____________________________________________________________
consensus             GAGGGCGTCAGGCGAGCACAAAAGCCGTGGGCAACGCGGTCATAGGTGTACAAAAGCTCA
 
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JMFF017J09+           GATGATGATGACTGGTTCGAGCTCGAGAGTGTACGGATGATGGAGGAATACCAGTCATGA
JMFF032J16+           GATGATGATGACTGGTTCGAGCTCGAGAGTGTACGGATGATGGAGGAATACCAGTCATGA
JMFF002N05+           GATGATGATGACTGGTTCGAGCTCGAGAGTGTACGGATGATGGAGGAATACCAGTCATGA
                      ____________________________________________________________
consensus             GATGATGATGACTGGTTCGAGCTCGAGAGTGTACGGATGATGGAGGAATACCAGTCATGA
 
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JMFF017J09+           TGGGAAGAGAAAACAAGGGGTTTCTTAGATTTCATAACGTGAACGATAAAGGTCTCCTGT
JMFF032J16+           TGGGAAGAGAAAACAAGGGGTTTCTTAGATTTCATAACGTGAACGATAAAGGTCTCCTGT
JMFF002N05+           TGGGAAGAGAAAACAAGGGGTTTCTTAGATTTCATAACGTGAACGATAAAGGTCTCCTGT
                      ____________________________________________________________
consensus             TGGGAAGAGAAAACAAGGGGTTTCTTAGATTTCATAACGTGAACGATAAAGGTCTCCTGT
 
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JMFF017J09+           TTCTCCAACGAAACAGAAACCCTCACTGAAACCACACATAATAATAAGAATATGAAGAGA
JMFF032J16+           TTCTCCAACGAAACAGAAACCCTCACTGAAACCACACATAATAATAAGAATATGAAGAGA
JMFF002N05+           TTCTCCAACGAAACAGAAACCCTCACTGAAACCACACATAATAATAAGAATATGAAGAGA
                      ____________________________________________________________
consensus             TTCTCCAACGAAACAGAAACCCTCACTGAAACCACACATAATAATAAGAATATGAAGAGA
 
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JMFF017J09+           AAGGAGGAAGGAACAGCCATTGACTGTGAAGGTAGCTAGGTACGTAGTGTGGAT      
JMFF032J16+           AAGGAGGAAGGAACAGCCATTGACTGTGAAGGTAGCTAGGTACGTAGTGTGGAT      
JMFF002N05+           AAGGAGGAAGGAACAGCCATTGACTGTGAAGGTAGCTAGGTACGTAGTGTGGATGATGAT
                      ____________________________________________________________
consensus             AAGGAGGAAGGAACAGCCATTGACTGTGAAGGTAGCTAGGTACGTAGTGTGGATGATGAT