Contig 004444:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P11+                                        CAAAAGGAGGAGGTTCAACTGNTGCAAGAAT
                      ____________________________________________________________
consensus                                          CAAAAGGAGGAGGTTCAACTGNTGCAAGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P11+           CGCATCCTNTGCTGTCATAGCTCCAGTTGGACTATTTTTGGCCTTTTTTGAATGAGTCTG
JMFF002H06+                                                          TTGAATGAGTCTG
                      ____________________________________________________________
consensus             CGCATCCTNTGCTGTCATAGCTCCAGTTGGACTATTTTTGGCCTTTTTTGAATGAGTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P11+           CATGCGAGTGACAACTACCCAAATTGGATTAGTCAGCAGCACATTAACACACCCAGATAG
JMFF002H06+           CATGCGAGTGACACCTACCCAAATTGGATTAGTCAGCAGCACATTAACACACCCAGATAG
                      ____________________________________________________________
consensus             CATGCGAGTGACACCTACCCAAATTGGATTAGTCAGCAGCACATTAACACACCCAGATAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P11+           AGCAGCAACCACAAGTGATGATAACATTCCAACTGAACCATCACCAATCCCTCTCCTCTT
JMFF002H06+           AGCAGCAACCACAAGTGATGATAACATTCCAACTGAACCATCACCAATCCCTCTCCTCTT
                      ____________________________________________________________
consensus             AGCAGCAACCACAAGTGATGATAACATTCCAACTGAACCATCACCAATCCCTCTCCTCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P11+           ACGATCAAGGGCAGCAACTTCAGCTTTGGTCCTGAATATTTGATAGAAGTAGTAATAGAC
JMFF002H06+           ACGATCAAGGGCAGCAACTTCAGCTTTGGTCCTGAATATTTGATAGAAGTAGTAATAGAC
                      ____________________________________________________________
consensus             ACGATCAAGGGCAGCAACTTCAGCTTTGGTCCTGAATATTTGATAGAAGTAGTAATAGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P11+           ACCTTGAGAAGCCGCCGTTCCCACCAGCGACGGCGCCAAACCGCCGTAGAGCCGATCCCA
JMFF002H06+           ACCCTGAGAAGCCGCCGTTCCCACCAGCGACGGCGCCAAACCGCCGTAGAGCCGATCCCA
                      ____________________________________________________________
consensus             ACCTTGAGAAGCCGCCGTTCCCACCAGCGACGGCGCCAAACCGCCGTAGAGCCGATCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P11+           CCCCTCCTGCCTCGCAACCTGGCACATATGCTCAATAGTGCTAAGCTGCTTCCTCTTCCC
JMFF002H06+           CCCCTCCTGCCTCGCAACCTGGCACATATGCTCAATAGTGCTAAGCTGCTTCCTCTTCCC
                      ____________________________________________________________
consensus             CCCCTCCTGCCTCGCAACCTGGCACATATGCTCAATAGTGCTAAGCTGCTTCCTCTTCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P11+           CTCCTTCGATTCTCGTTGCGTTTGTTGCCGCGTATTTACGGTTTGGAGCGGATAGGTGAT
JMFF002H06+           CTCCTTCGATTCTCGTTGCGTTTGTTGCCGCGTATTTACGGTTTGGAGCGGATAGGTGAT
                      ____________________________________________________________
consensus             CTCCTTCGATTCTCGTTGCGTTTGTTGCCGCGTATTTACGGTTTGGAGCGGATAGGTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P11+           GAGCTGAGCGATGATGCCGCCACCGGCGCCGGCGAGGCCATTGATCAAAGCATCGGACAT
JMFF002H06+           GAGCTGAGCGATGATGCCGCCACCGGCGCCGGCGAGGCCATTGATCAAAGCATCGGACAT
                      ____________________________________________________________
consensus             GAGCTGAGCGATGATGCCGCCACCGGCGCCGGCGAGGCCATTGATCAAAGCATCGGACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P11+           AGTTACTCGGGAGCAGGAAAAGATCTGAAGAGTAATAAATTGGGCGTTGCGAGATGGTGG
JMFF002H06+           AGTTACTCGGGAGCAGGAAAAGATCTGAAGAGTAATAAATTGGGCGTTGCGAGATGGTGG
                      ____________________________________________________________
consensus             AGTTACTCGGGAGCAGGAAAAGATCTGAAGAGTAATAAATTGGGCGTTGCGAGATGGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF007P11+           GAGGAGGAGACTATCTCTGACTTTGGC                                 
JMFF002H06+           GAGGAGGAGACTATCTCTGACTTTGGCTGTAGTAATTGAATGAAGGAAGGCATGTGAAGT
                      ____________________________________________________________
consensus             GAGGAGGAGACTATCTCTGACTTTGGCTGTAGTAATTGAATGAAGGAAGGCATGTGAAGT