Contig 004443:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002G07Sequence567004443 (6)ref|XP_011028654.1|4e-77PREDICTED: coatomer subunit alpha-1 [Populus euphratica]
JMFS030C12Sequence470004443 (6)ref|XP_011028654.1|1e-56PREDICTED: coatomer subunit alpha-1 [Populus euphratica]
JMFS037B12Sequence590004443 (6)ref|XP_011074632.1|1e-133PREDICTED: coatomer subunit alpha-1-like [Sesamum indicum]
JMFS077G09Sequence609004443 (6)gb|KDO49492.1|9e-140hypothetical protein CISIN_1g000933mg [Citrus sinensis]
JMFS125H06Sequence589004443 (6)gb|KDP41738.1|2e-81hypothetical protein JCGZ_26756 [Jatropha curcas]
JMFS137E03Sequence605004443 (6)ref|XP_002957821.1|8e-100hypothetical protein VOLCADRAFT_77684 [Volvox carteri f. nagariensis] gb|EFJ4114

Alignment

This contig is upended


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JMFS037B12+                                   CTTGAGTGAAATAAAACACAGGAAACATTGTTCATG
                      ____________________________________________________________
consensus                                     CTTGAGTGAAATAAAACACAGGAAACATTGTTCATG
 
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JMFS037B12+           TGGCCTCTCAATGTGTCCACCTCCCAAGCTTTTGTGTCATTCATTCTCCAAATCTTGACT
                      ____________________________________________________________
consensus             TGGCCTCTCAATGTGTCCACCTCCCAAGCTTTTGTGTCATTCATTCTCCAAATCTTGACT
 
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JMFS037B12+           TGGCGATCATCTGCACCAGAAACAATTAGGGGGAGTGTAGGATGAAAAGAAGCCCAATTA
JMFS077G09+                                                             AGCCCAATTA
                      ____________________________________________________________
consensus             TGGCGATCATCTGCACCAGAAACAATTAGGGGGAGTGTAGGATGAAAAGAAGCCCAATTA
 
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JMFS037B12+           ACACCTCTATCATGGCCCTCTAAGACATACTTCACCACAGCATCAACCCCACCAAAGAAG
JMFS077G09+           ACACCTCTATCATGGCCCTATAAGACATACTTCACCACAGCATCAACCCCACCAAAGAAG
                      ____________________________________________________________
consensus             ACACCTCTATCATGGCCCTCTAAGACATACTTCACCACAGCATCAACCCCACCAAAGAAG
 
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JMFS037B12+           TCCGTGTTCATTTGACTCAACCGCAGGATGTCATCAGCAGGGGAAACTGTTTTTTTCCTC
JMFS077G09+           TCCGTGTTCATTTGACTCAACCGCAGGATGTCATCAGCAGGGGAAACTGTTTTTTTCCTC
                      ____________________________________________________________
consensus             TCCGTGTTCATTTGACTCAACCGCAGGATGTCATCAGCAGGGGAAACTGTTTTTTTCCTC
 
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JMFS037B12+           AGGGCACCAATATCCCAGACCCGAACAGTCTGATCCAATGATGCTGAGACAACCAAGTCC
JMFS077G09+           AGGGCACCAATATCCCAGACCCGAACAGTCTGATCCAATGATGCTGAGACAACCAAGTCC
                      ____________________________________________________________
consensus             AGGGCACCAATATCCCAGACCCGAACAGTCTGATCCAATGATGCTGAGACAACCAAGTCC
 
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JMFS037B12+           TCTTTGGGATGAAATGAGGCACACATCACATAATGGTTGTGACCAGTCAAGACAGAAATA
JMFS077G09+           TCTTTGGGATGAAATGAGGCACACATCACATAATGGTTGTGACCAGTCAAGACAGAAATA
JMFS137E03+                GGGATGAAATGAGGCACACATCACATAATGGTTGTGACCAGTCAAGACAGAAATA
                      ____________________________________________________________
consensus             TCTTTGGGATGAAATGAGGCACACATCACATAATGGTTGTGACCAGTCAAGACAGAAATA
 
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JMFS037B12+           CATGTCCGAGACTGCCAATTCCATATCCTGATTGTCTGATCATCACTTGCACTAACAATC
JMFS077G09+           CATGTCCGAGACTGCCAATTCCATATCCTGATTGTCTGATCATCACTTGCACTAACAATC
JMFS137E03+           CATGTCCGAGACTGCCAATTCCATATCCTGATTGTCTGATCATCACTTGCACTAACAATC
JMFS125H06+                 CGAGACTGCCAATTCCATATCCTGATTGTCTGGTCATCACTTGCACTAACAATC
JMFF002G07+                                            GTCTGATCATCACTTGCACTAACAATC
                      ____________________________________________________________
consensus             CATGTCCGAGACTGCCAATTCCATATCCTGATTGTCTGATCATCACTTGCACTAACAATC
 
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JMFS037B12+           CATGGGTACTCATGATGAAATTGAACAGTTCGAATGTAATCAAGATGTCCAAGGAGGGTA
JMFS077G09+           CATGGGTACTCATGATGAAATTGAACAGTTCGAATGTAATCAAGATGTCCAAGGAGGGTA
JMFS137E03+           CATGGGTACTCATGATGAAATTGAACAGTTCGAATGTAATCAAGATGTCCAAGGAGGGTA
JMFS030C12+                                                               GGAGGGTA
JMFS125H06+           CAGGGAGATTCATGGTGAAACTGGACAGTTCGGATGTAATCGAGATGTCCAAGGAGGGTA
JMFF002G07+           CATGGGTACTCATGATGAAATTGAACAGTTCGAATGTAATCAAGATGTCCAAGGAGGGTA
                      ____________________________________________________________
consensus             CATGGGTACTCATGATGAAATTGAACAGTTCGAATGTAATCAAGATGTCCAAGGAGGGTA
 
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JMFS037B12+           AACAGACACCTATGCAGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCGGAG
JMFS077G09+           AACAGACACCTATGCAGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCGGAG
JMFS137E03+           AACAGACACCTATGCAGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCGGAG
JMFS030C12+           AACAGACACCTATGCAGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCGGAG
JMFS125H06+           AACAAACACCTATGTTGCTTGTAATTCCATACCTTGATTTTATAATCATCACCTCCAGAT
JMFF002G07+           AACAGACACCTATGCAGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCGGAG
                      ____________________________________________________________
consensus             AACAGACACCTATGCAGCTTGTAATTCCATACCTTAATTTTATAATCATCACCTCCGGAG
 
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JMFS037B12+           ACGAAGAGAG                                                  
JMFS077G09+           ACGAAGAGAGGCTGAGATTTGTGAAAGTGAACGCCGCGAACGGGGCCATCATGCTCGTCG
JMFS137E03+           ACGAAGAGAGGCTGAGATTTGTGAAAGTGAACGCCGCGAACGGGGCCATCATGCTCGTCG
JMFS030C12+           ACGAAGAGAGGCTGAGATTTGTGAAAGTGAACGCCGCGAACGGGGCCATCATGCTCGTCG
JMFS125H06+           ACGAAGAGAGGCTGAGAATTGTGGAAGTGAACGCCGCGAACAGGGCCATCATGCTCGTCG
JMFF002G07+           ACGAAGAGAGGCTGAGATTTGTGAAAGTGAACGCCGCGAACGGGGCCATCATGCTCGTCG
                      ____________________________________________________________
consensus             ACGAAGAGAGGCTGAGATTTGTGAAAGTGAACGCCGCGAACGGGGCCATCATGCTCGTCG
 
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JMFS077G09+           AACCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGAGA
JMFS137E03+           AACCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGAGA
JMFS030C12+           AACCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGAGA
JMFS125H06+           AACCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCACTGTGAAGG
JMFF002G07+           AACCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGAGA
                      ____________________________________________________________
consensus             AACCGATCAATGAGGGTGCCCATCCGGTAGTCCCAGAGCTGGATCACGCCGCTGTGGAGA
 
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JMFS077G09+           CTGGCTAAGATCCATGGCCGCTTGCTGTGGAAGCTCAGGCCCTTCACTCGATTACTCTT 
JMFS137E03+           CTGGCTAAGATCCATGGCCGCTTGCTGTGGAAGCTCAGGCCCTTCACTCGATTACTCTTG
JMFS030C12+           CTGGCTAAGATCCATGGCCGCTTGCTGTGGAAGCTCAGGCCCTTCACTCGATTACTCTTG
JMFS125H06+           CTGGCCAGGATCCATGGCCGCTTATTGTGGAAGCTCAGCCCCTTCACTCGGTTACTCTTC
JMFF002G07+           CTGGCTAAGATCCATGGCCGCTTGCTGTGGAAGCTCAGGCCCTTCACTCGATTACTCTTG
                      ____________________________________________________________
consensus             CTGGCTAAGATCCATGGCCGCTTGCTGTGGAAGCTCAGGCCCTTCACTCGATTACTCTTG
 
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JMFS137E03+           GTCTCGAATTTCGTCAACATTT                                      
JMFS030C12+           GTCTCGAATTTCGTCAACATTT                                      
JMFS125H06+           GTCTCGAACTTCGTCAACATTT                                      
JMFF002G07+           GTCTCGAATTTCGTCAACATTTCCCCTTCCCCTCACTCACTCCCCCAATCCGAGCTTCAA
                      ____________________________________________________________
consensus             GTCTCGAATTTCGTCAACATTTCCCCTTCCCCTCACTCACTCCCCCAATCCGAGCTTCAA
 
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JMFF002G07+           TTCTCAGGCTTTCTCGAACAGAAATCTGGAAAATGGAAATCTAGCTGAACGCAGAGATCG
                      ____________________________________________________________
consensus             TTCTCAGGCTTTCTCGAACAGAAATCTGGAAAATGGAAATCTAGCTGAACGCAGAGATCG
 
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JMFF002G07+           AATTGAATTCAGATCTGCAATGAACGGTGCATTTCACGGAGATCGGTGGCTCTTGTGAAC
                      ____________________________________________________________
consensus             AATTGAATTCAGATCTGCAATGAACGGTGCATTTCACGGAGATCGGTGGCTCTTGTGAAC
 
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JMFF002G07+           CCCAAGCTGGGCGGGTAGGCTCACTACTCACTAGGCCGGTGGAGTTTTCTGAATTAGATC
                      ____________________________________________________________
consensus             CCCAAGCTGGGCGGGTAGGCTCACTACTCACTAGGCCGGTGGAGTTTTCTGAATTAGATC