Contig 004438:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001N10Sequence520004438 (4)emb|CDO98827.1|1e-34unnamed protein product [Coffea canephora]759002575 (4)ref|XP_006354280.1|1e-81PREDICTED: P17/29C-like protein DDB_G0287399-like [Solanum tuberosum]
JMFF020L22Sequence533004438 (4)emb|CDO98827.1|2e-37unnamed protein product [Coffea canephora]733002575 (4)ref|XP_009758238.1|6e-77PREDICTED: uncharacterized transmembrane protein DDB_G0289901 [Nicotiana sylves
JMFF025M20Sequence551004438 (4)emb|CDO98827.1|3e-40unnamed protein product [Coffea canephora]337002575 (4)ref|XP_011091009.1|1e-17PREDICTED: ATP-dependent RNA helicase glh-2-like [Sesamum indicum]
JMSF044H05Sequence743004438 (4)emb|CDO98827.1|3e-65unnamed protein product [Coffea canephora]826002575 (4)ref|XP_004229269.1|4e-89PREDICTED: uncharacterized transmembrane protein DDB_G0289901 [Solanum lycopers

Alignment

This contig is upended


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JMSF044H05+                                                                 ACCCCC
                      ____________________________________________________________
consensus                                                                   ACCCCC
 
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JMSF044H05+           AGCCATACTACTCATTGGTGTCCCTCCAAGACCAGAACTTCTATTATTTGGAGCACTCAT
                      ____________________________________________________________
consensus             AGCCATACTACTCATTGGTGTCCCTCCAAGACCAGAACTTCTATTATTTGGAGCACTCAT
 
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JMSF044H05+           ATTCACATTGCCACTACTAACATTAGTATTATATCCCCCACTGGTAAAGTTTCCGAAACT
                      ____________________________________________________________
consensus             ATTCACATTGCCACTACTAACATTAGTATTATATCCCCCACTGGTAAAGTTTCCGAAACT
 
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JMSF044H05+           CTGGTTAGATCCCCCCCAAGTTCCGCTGCTTTTGACAGAACTACCTGTTTTCGGCAAGGA
                      ____________________________________________________________
consensus             CTGGTTAGATCCCCCCCAAGTTCCGCTGCTTTTGACAGAACTACCTGTTTTCGGCAAGGA
 
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JMSF044H05+           ATCGGCCACACCCCCCATTGAAAATGAACTCTTATTTGTCACCGGGGTGGAATTTTTCAG
JMFF025M20+                                                            GAATTTTTCAG
                      ____________________________________________________________
consensus             ATCGGCCACACCCCCCATTGAAAATGAACTCTTATTTGTCACCGGGGTGGAATTTTTCAG
 
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JMSF044H05+           TGGCACATTGCTACCACCCTTATTTTGCCGAAGTGCTGAGTTCACCAAATCACCAAACAA
JMFF020L22+            GGCACATTGCTACCACCCTTATTTTGCCGAAGTGCTGAGTTCACCAAATCACCAAACAA
JMFF025M20+           TGGCACATTGCTACCACCCTTATTTTGCCGAAGTGCTGAGTTCACCAAATCACCAAACAA
JMFF001N10+                               TATTTTGCCGAAGTGCTGAGTTCACCAAATCACCAAACAA
                      ____________________________________________________________
consensus             TGGCACATTGCTACCACCCTTATTTTGCCGAAGTGCTGAGTTCACCAAATCACCAAACAA
 
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JMSF044H05+           ATTAGGGTCTTTTTTCGTCACAATACCTACAGTTGAAGCACTACCAGTGTTCGAGGGCGC
JMFF020L22+           ATTAGGGTCTTTTTTCGTCACAATACCTACAGTTGAAGCACTACCAGTGTTCGAGGGCGC
JMFF025M20+           ATTAGGGTCTTTTTTCGTCACAATACCTACAGTTGAAGCACTACCAGTGTTCGAGGGCGC
JMFF001N10+           ATTAGGGTCTTTTTTCGTCACAATACCTACAGTTGAAGCACTACCAGTGTTCGAGGGCGC
                      ____________________________________________________________
consensus             ATTAGGGTCTTTTTTCGTCACAATACCTACAGTTGAAGCACTACCAGTGTTCGAGGGCGC
 
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JMSF044H05+           CGCAGAGCCCCAACTCTTCCCAAATATATCCCCAACCATGGACGTCGGCCCGGACAGAGA
JMFF020L22+           CGCAGAGCCCCAACTCTTCCCAAATATATCCCCAACCATGGACGTCGGCCCGGACAGAGA
JMFF025M20+           CGCAGAGCCCCAACTCTTCCCAAATATATCCCCAACCATGGACGTCGGCCCGGACAGAGA
JMFF001N10+           CGCAGAGCCCCAACTCTTCCCAAATATATCCCCAACCATGGACGTCGGCCCGGACAGAGA
                      ____________________________________________________________
consensus             CGCAGAGCCCCAACTCTTCCCAAATATATCCCCAACCATGGACGTCGGCCCGGACAGAGA
 
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JMSF044H05+           TCCAACAGGTTGGTGAGTCCACGATGCCTTGTTAGTGTTGGATTGGTTGGTCCAAGATGC
JMFF020L22+           TCCAACAGGTTGGTGAGTCCACGATGCCTTGTTAGTGTTGGATTGGTTGGTCCAAGATGC
JMFF025M20+           TCCAACAGGTTGGTGAGTCCACGATGCCTTGTTAGTGTTGGATTGGTTGGTCCAAGATGC
JMFF001N10+           TCCAACAGGTTGGTGAGTCCACGATGCCTTGTTAGTGTTGGATTGGTTGGTCCAAGATGC
                      ____________________________________________________________
consensus             TCCAACAGGTTGGTGAGTCCACGATGCCTTGTTAGTGTTGGATTGGTTGGTCCAAGATGC
 
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JMSF044H05+           CGTCCCATACGGCTTTGATTGCGCAGAAGATGAATACGACGACGTTTGGTTCTTTTGGTC
JMFF020L22+           CGTCCCATACGGCTTTGATTGCGCAGAAGATGAATACGACGACGTTTGGTTCTTTTGGTC
JMFF025M20+           CGTCCCATACGGCTTTGATTGCGCAGAAGATGAATACGACGACGTTTGGTTCTTTTGGTC
JMFF001N10+           CGTCCCATACGGCTTTGATTGCGCAGAAGATGAATACGACGACGTTTGGTTCTTTTGGTC
                      ____________________________________________________________
consensus             CGTCCCATACGGCTTTGATTGCGCAGAAGATGAATACGACGACGTTTGGTTCTTTTGGTC
 
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JMSF044H05+           ATTGAGAGATCGGGAACAGCCAGTGTTCAGCCCGAAATCGAAATCGTTCATAGAACCCGA
JMFF020L22+           ATTGAGAGATCGGGAACAGCCAGTGTTCAGCCCGAAATCGAAATCGTTCATAGAACCCGA
JMFF025M20+           ATTGAGAGATCGGGAACAGCCAGTGTTCAGCCCGAAATCGAAATCGTTCATAGAACCCGA
JMFF001N10+           ATTGAGAGATCGGGAACAGCCAGTGTTCAGCCCGAAATCGAAATCGTTCATAGAACCCGA
                      ____________________________________________________________
consensus             ATTGAGAGATCGGGAACAGCCAGTGTTCAGCCCGAAATCGAAATCGTTCATAGAACCCGA
 
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JMSF044H05+           CTTCATATTCGATTTCCCGTAATTGGAATTCATTTCTTAATCTC----TCTGTGATGAAA
JMFF020L22+           CTTCATATTCGATTTCCCGTAATTGGAATTCATTTCTTAATCTCTCTATCTGTGATGAAA
JMFF025M20+           CTTCATATTCGATTTCCCGTAATTGGAATTCATTTCTTAATCTCTCTATCTGTGATGAAA
JMFF001N10+           CTTCATATTCGATTTCCCGTAATTGGAATTCATTTCTTAATCTCTCTATCTGTGATGAAA
                      ____________________________________________________________
consensus             CTTCATATTCGATTTCCCGTAATTGGAATTCATTTCTTAATCTCTCTATCTGTGATGAAA
 
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JMSF044H05+           GTCGGATTGGAATTAGAGCTGAAAGTATGAGGAGAATGGATTGATCAGATAGCTTCACAA
JMFF020L22+           GTCGGATTGGAATTAGAGCTGAAAGTATGAGGAGAATGGATTGATCAGATAGCTTCACAA
JMFF025M20+           GTCGGATTGGAATTAGAGCTGAAAGTATGAGGAGAATGGATTGATCAGATAGCTTCACAA
JMFF001N10+           GTCGGATTGGAATTAGAGCTGAAAGTATGAGGAGAATGGATTGATCAGATAGCTTCACAA
                      ____________________________________________________________
consensus             GTCGGATTGGAATTAGAGCTGAAAGTATGAGGAGAATGGATTGATCAGATAGCTTCACAA
 
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JMSF044H05+           CCGCCTTTGATGACGATCG                                         
JMFF020L22+           CCGCCTTTGATGACGATCGGATTGAGAGAGAGAATGGCGTCCGGGAAGGGATCT      
JMFF025M20+           CCGCCTTTGATGACGATCGGATTGAGAGAGAGAATGGCGTCCGGGAAGGGATCT      
JMFF001N10+           CCGCCTTTGATGACGATCGGATTGAGAGAGAGAATGGCGTCCGGGAAGGGATCTAATTGT
                      ____________________________________________________________
consensus             CCGCCTTTGATGACGATCGGATTGAGAGAGAGAATGGCGTCCGGGAAGGGATCTAATTGT