Contig 004433:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMCP018C12+                                                                     AA
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consensus                                                                       AA
 
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JMCP018C12+           ACTTCAGCAATGAGTAAACTCTGTATTACCAACTTAAACGTTTCACACAATTTGTTACAC
rJMCP006F04+                GCAATGAGTAAACTCTGTATTACCAACTTAAACGTTTCACACAATTTGTTACAC
rJMCP006D07+                GCAATGAGTAAACTCTGTATTACCAACTTAAACGTTTCACACAATTTGTTACAC
                      ____________________________________________________________
consensus             ACTTCAGCAATGAGTAAACTCTGTATTACCAACTTAAACGTTTCACACAATTTGTTACAC
 
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JMCP018C12+           ACCTATATAAAGCAAATGCCCCTACACTACCCTAAGACAAAAAGGGGAGAAAATTTGATG
rJMCP006F04+          ACCTATATAAAGCAAATGCCCCTACACTACCCTAAGACAAAAAGGGGAGAAAATTTGATG
rJMCP006D07+          ACCTATATAAAGCAAATGCCCCTACACTACCCTAAGACAAAAAGGGGAGAAAATTTGATG
                      ____________________________________________________________
consensus             ACCTATATAAAGCAAATGCCCCTACACTACCCTAAGACAAAAAGGGGAGAAAATTTGATG
 
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JMCP018C12+           CTACAACGACACGACTAAGGTAAAATGGCATGATGATACGCAGACAACAATGCGAACTCA
rJMCP006F04+          CTACAACGACACGACTAAAGTAAAATGGCATGATGATACGCAGACAACAATGCGAACTCA
rJMCP006D07+          CTACAACGACACGACTAAAGTAAAtTGGCATGATGATACGCAGACAACAATGCGAACTCA
                      ____________________________________________________________
consensus             CTACAACGACACGACTAAAGTAAAATGGCATGATGATACGCAGACAACAATGCGAACTCA
 
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JMCP018C12+           ATTATACATGGAAGTTTGCCTCGACGATGCAACTGGCACAAATATACAATATTCCTG   
rJMCP006F04+          ATTATACATGGAAGTTTGCCTCGACGATGCAACTGGCACAAATATACAATATTCCTGTAC
rJMCP006D07+          ATTATACATGGAAGTTTGCCTCGACGATGCAtCTGGCACAAATATACAATATTCCTGTAC
                      ____________________________________________________________
consensus             ATTATACATGGAAGTTTGCCTCGACGATGCAACTGGCACAAATATACAATATTCCTGTAC
 
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rJMCP006F04+          AACCATAAAATGTTCTTCCTCGACAAACATTGCAATCGATAGACAAAGAATCTGCAAGCA
rJMCP006D07+          AACCATAAAATGTTCTTCCTCGACAAACATTGCAATCGATAGACAAAGAATCTGCAAGCA
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consensus             AACCATAAAATGTTCTTCCTCGACAAACATTGCAATCGATAGACAAAGAATCTGCAAGCA
 
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rJMCP006F04+          CAGCACTTCTCAAGAAGATTACCTGGTTGGAATTCTAGTGAAGTAATATCTCAGATAGAC
JMCP007A09+                                CCTGGTTGGAATTCTAGTcAAGTAATATgaCAGATAGAC
rJMCP006D07+          CAGCACTTCTCAAGAAGATTACCTGGTTGGAATTCTAGTGAAGTAATATCTCAGATAGAC
                      ____________________________________________________________
consensus             CAGCACTTCTCAAGAAGATTACCTGGTTGGAATTCTAGTGAAGTAATATCTCAGATAGAC
 
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rJMCP006F04+          GTGCCTCTGCATCAGCTGGAATATCTCTTCCTGGAACCTGGACCTTTAGAAGACTCGAAT
JMCP007A09+           GTGCCagacgtagtcgaGGAATATCagaTCCTGGAAggaGGACCTTTAGAAGACTCGAAT
rJMCP006D07+          GTGCCTCTGCATCAGCTGGAATATCTCTTCCTGGAACCTGGACCTTTAGAAGACTCGAAT
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consensus             GTGCCTCTGCATCAGCTGGAATATCTCTTCCTGGAACCTGGACCTTTAGAAGACTCGAAT