Contig 004425:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011B20Sequence470003219 (3)ref|XP_008800968.1|1e-46PREDICTED: probable UDP-arabinopyranose mutase 2 [Phoenix dactylifera]575004425 (3)ref|XP_009779067.1|4e-63PREDICTED: probable UDP-arabinopyranose mutase 5 [Nicotiana sylvestris]
JMFF033L15Sequence571003219 (3)ref|XP_007029449.1|8e-68Alpha-1,4-glucan-protein synthase family protein isoform 2 [Theobroma cacao] re699004425 (3)ref|XP_009779067.1|3e-89PREDICTED: probable UDP-arabinopyranose mutase 5 [Nicotiana sylvestris]
JMSF053G01Sequence691003219 (3)ref|XP_007029449.1|2e-99Alpha-1,4-glucan-protein synthase family protein isoform 2 [Theobroma cacao] re858004425 (3)ref|XP_009779067.1|2e-67PREDICTED: probable UDP-arabinopyranose mutase 5 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF033L15+ AAAGGCAGA
                      ____________________________________________________________
consensus AAAGGCAGA
 
. : . : . : . : . : . :
rJMFF033L15+ GAAACCCCCCGATATGTGGATGCTGTTCTTACCGTCCCAGCTAGGGCCATGATGCCCATG
                      ____________________________________________________________
consensus GAAACCCCCCGATATGTGGATGCTGTTCTTACCGTCCCAGCTAGGGCCATGATGCCCATG
 
. : . : . : . : . : . :
rJMFF011B20+ TGCCATCTTTC
rJMFF033L15+ AGTGGAATCAACATAGCTTTTAACCGTGAGCTGGTTGGACCTGCCTTGCTGCCATCTTTC
rJMSF053G01+ TGCCATCTTTC
                      ____________________________________________________________
consensus AGTGGAATCAACATAGCTTTTAACCGTGAGCTGGTTGGACCTGCCTTGCTGCCATCTTTC
 
. : . : . : . : . : . :
rJMFF011B20+ AGGCTGTCAAATGAAGGGAAGTTGAGGGGGGAAACCGTGGAAGATATATGGAGCGGAATG
rJMFF033L15+ AGGCTGTCAAATGAAGGGAAGCTGAGGGGGGAAACCGTGGAAGATATATGGAGCGGAATG
rJMSF053G01+ AGGCTGTCAAATGAAGGGAAGCTGAGGTGGGAAACCGTGGAAGATATATGGAGCGGAATG
                      ____________________________________________________________
consensus AGGCTGTCAAATGAAGGGAAGCTGAGGGGGGAAACCGTGGAAGATATATGGAGCGGAATG
 
. : . : . : . : . : . :
rJMFF011B20+ TGCGCTAAGGTAGTCTGTGACCATCTAAGGCTCGGTGTGAAAACCGGGCTTCCATNCGTT
rJMFF033L15+ TGCGCTAAGGTAGTCTGTGACCATCTAAGGCTCGGTGTGAAAACCGGGCTTCCATACGTT
rJMSF053G01+ TGCGCTGAGGTAGTCTGTGACCATCTAAGGCTCGGTGTGAAAACCGGGCTTCCATACGTT
                      ____________________________________________________________
consensus TGCGCTAAGGTAGTCTGTGACCATCTAAGGCTCGGTGTGAAAACCGGGCTTCCATACGTT
 
. : . : . : . : . : . :
rJMFF011B20+ TGGAGGAAGGAAAGAGGCAGTGCCATTGACAGCTTGAAGAAAGAGTGGGAGGGAGTGAAG
rJMFF033L15+ TGGAGGAAGGAAAGAGGCAGTGCCATTGACAGCTTGAAGAAAGAGTGGGAGGGAGTGAAG
rJMSF053G01+ TGGAGGAAGGAAAGAGGCAGTGCCATTGACAGCTTGAAGAAAGAGTGGGAGGGAGTGAAG
                      ____________________________________________________________
consensus TGGAGGAAGGAAAGAGGCAGTGCCATTGACAGCTTGAAGAAAGAGTGGGAGGGAGTGAAG
 
. : . : . : . : . : . :
rJMFF011B20+ CTGATGGAGGAAGTGATTCCATTCTTCCAAACGGTGAGGCTGTCTCCACAAGCTGTAACA
rJMFF033L15+ CTGATGGAGGAAGTGATTCCATTCTTCCAAACGGTGAGGCTGTCTCCACAAGCTGTAACA
rJMSF053G01+ CTGATGGAGGAAGTGATTCCATTCTTCCAAACGGTGAGGCTGTCTCCACAAGCTGTAACA
                      ____________________________________________________________
consensus CTGATGGAGGAAGTGATTCCATTCTTCCAAACGGTGAGGCTGTCTCCACAAGCTGTAACA
 
. : . : . : . : . : . :
rJMFF011B20+ GTAGAAGATTGCGTGGTTGAAATCGCCGCAGCTGTGAAGCAGCAGTTGGGACAAAAAGAT
rJMFF033L15+ GTAGAAGATTGCGTGGTTGAAATCGCCGCAGCTGTGAAGCAGCAGTTGGGACAAAAAGAT
rJMSF053G01+ GTAGAAGATTGCGTGGTTGAAATCGCCGCAGCTGTGAAGCAGCAGTTGGGACAAAAAGAT
                      ____________________________________________________________
consensus GTAGAAGATTGCGTGGTTGAAATCGCCGCAGCTGTGAAGCAGCAGTTGGGACAAAAAGAT
 
. : . : . : . : . : . :
rJMFF011B20+ GCCGTGTTCAAACGTGCTGCTGATGCCATGATAGAATGGATCAAGCCCTGGAAGACCATT
rJMFF033L15+ GCCGTGTTCAAACGTGCTGCTGATGCCATGATAGAATGGATCAAGCCCTGGAAGACCATT
rJMSF053G01+ GCCGTGTTCAAACGTGCTGCTGATGCCATGATAGAATGGATCAAGCTCTGGAAGACCATT
                      ____________________________________________________________
consensus GCCGTGTTCAAACGTGCTGCTGATGCCATGATAGAATGGATCAAGCCCTGGAAGACCATT
 
. : . : . : . : . : . :
rJMFF011B20+ AAAGCTCAAAGAACTTAAAAGAGTTGTGTTAAGAGTCAAACAGTGGAAATAATTGTCTTT
rJMFF033L15+ AAAGCTCAAAGAACTTAAAAGAGTTGTGTTAAGAGTCAAACAGTGGAAATAATTGTCTTT
rJMSF053G01+ AAAGCTCAAAGAACTTAAAAGAGTTGTGTTAAGAGTCAAACAGTGGAAATAATTGTCTTT
                      ____________________________________________________________
consensus AAAGCTCAAAGAACTTAAAAGAGTTGTGTTAAGAGTCAAACAGTGGAAATAATTGTCTTT
 
. : . : . : . : . : . :
rJMFF011B20+ ACATAAAGAGAAACTTTGTCCTGTTCACAATTCTTTTGCAACAATAATTATTCTTGGACG
rJMFF033L15+ ACATAAAGAGAAACTTTGTCCTGTTCACAATTCTTTTGCAACAATAATTATTCTTGGACG
rJMSF053G01+ ACATAAAGAGAAACTTTGTCCTGTTCACAATTCTTTTGCAACAATAATTATTCTTGGACG
                      ____________________________________________________________
consensus ACATAAAGAGAAACTTTGTCCTGTTCACAATTCTTTTGCAACAATAATTATTCTTGGACG
 
. : . : . : . : . : . :
rJMFF011B20+ CTAACCACTTGAAAAGGCACAACTCTCTCACAGACAGAAAGATGGTTAAAGTTGCATACT
rJMFF033L15+ CTAACCACTTGAAAAGGCACAACTCTCTCACAGACAGAAAGATGGTTAAAGTTGCATACT
rJMSF053G01+ CTAACCACTTGAAAAGGCACAACTCTCTCACAGACAGAAAGATGGTTAAAGTTGCATACT
                      ____________________________________________________________
consensus CTAACCACTTGAAAAGGCACAACTCTCTCACAGACAGAAAGATGGTTAAAGTTGCATACT
 
. : . : . : . : . : . :
rJMFF011B20+ TCATGCAATTTCTACTCAAAATTA
rJMFF033L15+ TCATGCAATTTCTACTCAAAATTA
rJMSF053G01+ TCATGCAATTTCTACTCAAAATTACGGTGATTTTATCTTCAATGACAAGATTCCATGAAA
                      ____________________________________________________________
consensus TCATGCAATTTCTACTCAAAATTACGGTGATTTTATCTTCAATGACAAGATTCCATGAAA
 
. : . : . : . : . : . :
rJMSF053G01+ CTTCTGCGAGTGCATTTTACCTGCCCGCTGAAAGTGAACATGATTGACACTGCTTTCATT
                      ____________________________________________________________
consensus CTTCTGCGAGTGCATTTTACCTGCCCGCTGAAAGTGAACATGATTGACACTGCTTTCATT
 
. : . : . : . : . : . :
rJMSF053G01+ TTCAAAATCATGAATGACCAAAAAAACATTTTAAAGAGAACCGAGTGTTAGGACGACGTG
                      ____________________________________________________________
consensus TTCAAAATCATGAATGACCAAAAAAACATTTTAAAGAGAACCGAGTGTTAGGACGACGTG
 
. : . : . : . : . : . :
rJMSF053G01+ ATATTTTAGATTCAGTTTTAAGGCGTGATATTTTAGATGATTCTGATGATTCTGTCCTGA
                      ____________________________________________________________
consensus ATATTTTAGATTCAGTTTTAAGGCGTGATATTTTAGATGATTCTGATGATTCTGTCCTGA
 
. : . : . : . : . : . :
rJMSF053G01+ GCCGCTCCCGAGGAATATGTCTGTAGAAAGCTTTTACGGCTCCCATTGCACCATCCTCAT
                      ____________________________________________________________
consensus GCCGCTCCCGAGGAATATGTCTGTAGAAAGCTTTTACGGCTCCCATTGCACCATCCTCAT