Contig 004423:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF052G11+                                          TCAGAGAATTGCACNTGTTGGAGAAATT
                      ____________________________________________________________
consensus                                             TCAGAGAATTGCACNTGTTGGAGAAATT
 
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rJMSF052G11+          GAAGCTGCTGAATCATGGTGGGGAGTTGCAATGCCTCCCCTCAAAAGTATGAATTTCCAC
                      ____________________________________________________________
consensus             GAAGCTGCTGAATCATGGTGGGGAGTTGCAATGCCTCCCCTCAAAAGTATGAATTTCCAC
 
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rJMSF002L22+                                    GGAACACAGCTCAAATGGAGTGAATTATCTGTAT
rJMSF052G11+          AAAAGATTAGGAGGCTAACCTTGTCTGGAACACAGCTCAAATGGAGTGAATTATCTGTAT
                      ____________________________________________________________
consensus             AAAAGATTAGGAGGCTAACCTTGTCTGGAACACAGCTCAAATGGAGTGAATTATCTGTAT
 
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rJMSF002L22+          TGGGATCACTGGAGTACCTTGAAATTCTCAAATTGGTAGAAAATGCATTCAAAGGAGATA
rJMSF052G11+          TGGGATCACTGGAGTACCTTGAAATTCTCAAATTGGTAGAAAATGCATTCAAAGGAGATA
                      ____________________________________________________________
consensus             TGGGATCACTGGAGTACCTTGAAATTCTCAAATTGGTAGAAAATGCATTCAAAGGAGATA
 
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rJMSF002L22+          AGTGGGAGCCATCTGAAGGTGACTTTCCTCGTCTCCAATTTTTGAGAATTGAGAGGACAG
rJMSF052G11+          AGTGGGAGCCATCTGAAGGTGACTTTCCTCGTCTCCAATTTTTGAGAATTGAGAGGACAG
                      ____________________________________________________________
consensus             AGTGGGAGCCATCTGAAGGTGACTTTCCTCGTCTCCAATTTTTGAGAATTGAGAGGACAG
 
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rJMSF002L22+          ATTTGAAGACATGGAAGGCTTCTAGCCTCCACTTCCCATTACTAAAGAGACTCATTCTTA
rJMSF052G11+          ATTTGAAGACATGGAAGGCTTCTAGCCTCCACTTCCCATTACTAAAGAGACTCATTCTTA
                      ____________________________________________________________
consensus             ATTTGAAGACATGGAAGGCTTCTAGCCTCCACTTCCCATTACTAAAGAGACTCATTCTTA
 
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rJMSF002L22+          GACAATGCCTTAATCTGGAGGAAGTCCCACCTAGCCTGGCGGACATAGACAATCTTCAGG
rJMSF052G11+          GACAATGCCTTAATCTGGAGGAAGTCCCACCTAGCCTGGCGGACATAGACAATCTTCAGG
                      ____________________________________________________________
consensus             GACAATGCCTTAATCTGGAGGAAGTCCCACCTAGCCTGGCGGACATAGACAATCTTCAGG
 
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rJMSF002L22+          AGATGGAGCTGAACCTTACCAACTCAAATGCTGCACTGTCGGCCTGGAACATTTTACAGA
rJMSF052G11+          AGATGGAGCTGAACCTTACCAACTCAAATGCTGCACTGTCGGCCTGGAACATTTTACAGA
                      ____________________________________________________________
consensus             AGATGGAGCTGAACCTTACCAACTCAAATGCTGCACTGTCGGCCTGGAACATTTTACAGA
 
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rJMSF002L22+          TAAAACAAGGGAAAGAGAAGGAAGTAAAGGAGAAAGGAGGAACCCCCCGGAGATTCAAGC
rJMSF052G11+          TAAAACAAGGGAGAGAGAAGGAAGTAAAGGAGAAAGGAGGAACCCCCCGGAGATTCAAGC
                      ____________________________________________________________
consensus             TAAAACAAGGGAGAGAGAAGGAAGTAAAGGAGAAAGGAGGAACCCCCCGGAGATTCAAGC
 
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rJMSF002L22+          TCAGTATCTATCCTCCTGATGAGCTCAAACTGATACAGCAAATTTAAAAATGCCATGGTG
rJMSF052G11+          TCAGTATCTATCCTCCTGATGAGCTCAAACTGATACAGCAAATTTAAAAATGCCATGGTG
                      ____________________________________________________________
consensus             TCAGTATCTATCCTCCTGATGAGCTCAAACTGATACAGCAAATTTAAAAATGCCATGGTG
 
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rJMSF002L22+          TCATCTAGATGATCTTTTGAGTTGTGCAGG                              
rJMSF052G11+          TCATCTAGATGATCTTTTGAGTTGTGCAGGGCATGAACTGAGCATCGTTGTTTGCAGATC
                      ____________________________________________________________
consensus             TCATCTAGATGATCTTTTGAGTTGTGCAGGGCATGAACTGAGCATCGTTGTTTGCAGATC
 
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rJMSF052G11+          TGGTGTGGTCTACCCAATAATGCTACACTAATTTTTTTTTCTGATATCCATATTTAAACC
                      ____________________________________________________________
consensus             TGGTGTGGTCTACCCAATAATGCTACACTAATTTTTTTTTCTGATATCCATATTTAAACC
 
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rJMSF052G11+          AATAAAAATAATCTTTGTTTTTGCAGTGCTGTATAATTTGTTTGGTGAGGTGGAGAACTT
                      ____________________________________________________________
consensus             AATAAAAATAATCTTTGTTTTTGCAGTGCTGTATAATTTGTTTGGTGAGGTGGAGAACTT
 
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rJMSF052G11+          ATGTTTTATTCTGTTGTTTTTGTAAATTCAATTTGTTATTTGTGCTGCTTGTTATTCAGG
                      ____________________________________________________________
consensus             ATGTTTTATTCTGTTGTTTTTGTAAATTCAATTTGTTATTTGTGCTGCTTGTTATTCAGG
 
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rJMSF052G11+          GAGACGTGTTTCTCATTGGCTGTGTTGTATTGGAGATTTGGAAGTTGGAACACATTTGTA
                      ____________________________________________________________
consensus             GAGACGTGTTTCTCATTGGCTGTGTTGTATTGGAGATTTGGAAGTTGGAACACATTTGTA
 
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rJMSF052G11+          TTGGAGACGTGTTTATTTGCTTGTTTGTTTATTTATGGATCTTCATTTTCTTTGTTGCTC
                      ____________________________________________________________
consensus             TTGGAGACGTGTTTATTTGCTTGTTTGTTTATTTATGGATCTTCATTTTCTTTGTTGCTC