Contig 004421:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF024P24+                                                        GCTGCAGTTAAAAC
rJMSF052C13+                                            AACAAAGAACTAGCTGCAGTTAAAAC
                      ____________________________________________________________
consensus                                               AACAAAGAACTAGCTGCAGTTAAAAC
 
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rJMFF024P24+          TGATGAAGAGAAAGCCAAGATTAAAACTCAAAANCAGAATGCCACAGCTGGGTTACGAAC
rJMSF052C13+          TGATGAAGAGAAAGCCAAGATTAAAACTCAAAAACAGAATGCCACAGCTGGGTTACGAAC
                      ____________________________________________________________
consensus             TGATGAAGAGAAAGCCAAGATTAAAACTCAAAAACAGAATGCCACAGCTGGGTTACGAAC
 
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rJMFF024P24+          CTGCAATAACATATTGGCTATGACACAGCCTCTACATTCAAAATCACCTACATTTATTGG
rJMSF052C13+          CTGCAATAACATATTGGCTATGACACAGCCTCTACATTCAAAATCACCTACATTTATTGG
                      ____________________________________________________________
consensus             CTGCAATAACATATTGGCTATGACACAGCCTCTACATTCAAAATCACCTACATTTATTGG
 
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rJMFF024P24+          GGACAAAAAGGTCAATCTTTCCTGGAGGGAAGTTCCAAAATCCTCTGCACCATCAACTGC
rJMSF052C13+          GGACAAAAAGGTCAATCTTTCCTGGAGGGAAGTTCCAAAATCCTCTGCACCATCAACTGC
                      ____________________________________________________________
consensus             GGACAAAAAGGTCAATCTTTCCTGGAGGGAAGTTCCAAAATCCTCTGCACCATCAACTGC
 
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rJMFF024P24+          TAAGGCGGCTGGAGCAAAGCGATCTGCTGGTGCTGTCAATGGTTCCAGCAATATGGGTTC
rJMSF052C13+          TAAGGCGGCTGGAGCAAAGCGATCTGCTGGTGCTGTCAATGGTTCCAGCAATATGGGTTC
                      ____________________________________________________________
consensus             TAAGGCGGCTGGAGCAAAGCGATCTGCTGGTGCTGTCAATGGTTCCAGCAATATGGGTTC
 
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rJMFF024P24+          AAGGAAGGGCCGTGGAGGTGGCAATCCCCACCAGCTGGTCAATAGGGCTTTTGAAGGTCT
rJMSF052C13+          AAAGAAGGGCCGTGGAGGTGGCAATCCCCACCAGCTGGTCAATAGGGCTTTTGAAGGTCT
                      ____________________________________________________________
consensus             AAGGAAGGGCCGTGGAGGTGGCAATCCCCACCAGCTGGTCAATAGGGCTTTTGAAGGTCT
 
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rJMFF024P24+          GGGATATGGTGGTAGAAGTGGTGGAAGGGGCAGAGGTCGGGGACGGGGTCCACGCGGTAG
rJMSF052C13+          GGGATATGGTGGTAGAAGTGGTGGAAGGGGCAGAGGTCGGGGACGGGGTCCACGCGGTAG
                      ____________________________________________________________
consensus             GGGATATGGTGGTAGAAGTGGTGGAAGGGGCAGAGGTCGGGGACGGGGTCCACGCGGTAG
 
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rJMFF024P24+          GGGAAGAGGATATCGCTAGGTATGGTCCCAGCGACATTGTAGCGATTAAAATCTGCACTC
rJMSF052C13+          GGGAAGAGGATATCGCTAGGTATGGTCCCAGCGACATTGTAGCGATTAAAATCTGCACTC
                      ____________________________________________________________
consensus             GGGAAGAGGATATCGCTAGGTATGGTCCCAGCGACATTGTAGCGATTAAAATCTGCACTC
 
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rJMFF024P24+          AGAAAGCTGATTGGAGGAGTGAAAAATGTCTGTAGATGCAATATTATCAGGAGGGAGAAG
rJMSF052C13+          AGAAAGCTGATTGGAGGAGTGAAAAATGTCTGTAGATGCAATATTATCAGGAGGGAGAAG
                      ____________________________________________________________
consensus             AGAAAGCTGATTGGAGGAGTGAAAAATGTCTGTAGATGCAATATTATCAGGAGGGAGAAG
 
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rJMFF024P24+          CTGATAACTTACTGAACTGGCATCACTATATTTTCCGAGCCACATACATGGTTTGAATAC
rJMSF052C13+          CTGATAACTTACTGAACTGGCATCACTATATTTTCCGAGCCACATACATGGTTTGAATAC
                      ____________________________________________________________
consensus             CTGATAACTTACTGAACTGGCATCACTATATTTTCCGAGCCACATACATGGTTTGAATAC
 
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rJMFF024P24+          TTGATACCCAGATTCCCGTCATTTTGCAAAGTTGAAATTTATTTCCTGCAAGGTTAACTG
rJMSF052C13+          TTGATACCCAGATTCCCGTCATTTTGCAAAGTTGAAATTTATTTCCTGCAAGGTTAACTG
                      ____________________________________________________________
consensus             TTGATACCCAGATTCCCGTCATTTTGCAAAGTTGAAATTTATTTCCTGCAAGGTTAACTG
 
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rJMFF024P24+          GAGACACCCCATCCAAGAAAAAACACTGGCCACACAATGTGAGGAAAATTATGTCGGAAC
rJMSF052C13+          GAGACACCCCATCCAAGAAAAAACACTGGCCACACAATGTGAGGAAAATTATGTCGGAAC
                      ____________________________________________________________
consensus             GAGACACCCCATCCAAGAAAAAACACTGGCCACACAATGTGAGGAAAATTATGTCGGAAC
 
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rJMFF024P24+          CTTTTCTAGTAACGTTGATAATCTTGTAATTCTTTGTTGTATCCATGGTTATGCACCCTT
rJMSF052C13+          CTTTTCTAGTAACGTTGATAATCTTGTAATTCTTTGTTGTATCCATGGTTATGCACCCTT
                      ____________________________________________________________
consensus             CTTTTCTAGTAACGTTGATAATCTTGTAATTCTTTGTTGTATCCATGGTTATGCACCCTT
 
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rJMFF024P24+          CTCTTGTGTACTTAGAATTTGAGCACTGAACTGATTTCTTGACTGCTG            
rJMSF052C13+          CTCTTGTGTACTTAGAATTTGAGCACTGAACTGATTTCTTGACTGCTGTCTACTGCTATT
                      ____________________________________________________________
consensus             CTCTTGTGTACTTAGAATTTGAGCACTGAACTGATTTCTTGACTGCTGTCTACTGCTATT
 
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rJMSF052C13+          AGATTTTGTGCCTTCGCGGAGTACTTGATAATATTATGGTAATGCTACTTACTTTGGTTA
                      ____________________________________________________________
consensus             AGATTTTGTGCCTTCGCGGAGTACTTGATAATATTATGGTAATGCTACTTACTTTGGTTA
 
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rJMSF052C13+          TAAGTAGGTTTCTCATGGGACTAATGAACACATCACATCGTGTTTGTATCACTTTGCCAT
                      ____________________________________________________________
consensus             TAAGTAGGTTTCTCATGGGACTAATGAACACATCACATCGTGTTTGTATCACTTTGCCAT