Contig 004418:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012K21Sequence183007516 (2)emb|CDP06989.1|4e-31unnamed protein product [Coffea canephora]704004418 (2)ref|XP_009632033.1|3e-75PREDICTED: inactive receptor-like serine/threonine-protein kinase At2g40270 [Ni
JMSF051E10Sequence631015877emb|CDP09230.1|2e-17unnamed protein product [Coffea canephora]753004418 (2)ref|XP_006353430.1|2e-87PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1-like

Alignment

This contig is upended


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rJMSF051E10+                                     TTTGAACATTTGCACATTAGGGAGGCGGAACAC
                      ____________________________________________________________
consensus                                        TTTGAACATTTGCACATTAGGGAGGCGGAACAC
 
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rJMSF012K21+                 GGGCNATGCGAATGAGGATCGTGATGGGCATGGCGTATTGCCTCGAGCACCTC
rJMSF051E10+          TTGGATTGGGCAATGCGAATGAGGATCGTGATGGGCATGGCGTATTGCCTCGAGCACCTC
                      ____________________________________________________________
consensus             TTGGATTGGGCAATGCGAATGAGGATCGTGATGGGCATGGCGTATTGCCTCGAGCACCTC
 
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rJMSF012K21+          CACAACTNGACGCCCCCGCTCTTCCTCNGAAACATGAATTCCTCGACTGTACACCTCTCG
rJMSF051E10+          CACAACTTGACGCCCCCGCTCTTCCTCAGAAACATGAATTCCTCGACTGTACACCTCTCG
                      ____________________________________________________________
consensus             CACAACTTGACGCCCCCGCTCTTCCTCAGAAACATGAATTCCTCGACTGTACACCTCTCG
 
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rJMSF012K21+          AATGACTACGCGGCCAAGATGTCCGACTTTGTGTTCTGGAGTGAGGCGGCCGCGGGCGAG
rJMSF051E10+          AATGACTACGCGGCCAAGATGTCCGACTTTGTGTTCTGGAGTGAGGCGGCCGCGGGCGAG
                      ____________________________________________________________
consensus             AATGACTACGCGGCCAAGATGTCCGACTTTGTGTTCTGGAGTGAGGCGGCCGCGGGCGAG
 
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rJMSF012K21+          ATGCATTCCAATGCGGCGAGTAACGTGTACAGCTTCGGTGTCATTCTGTTCGAGACGATG
rJMSF051E10+          ATGCATTCCAATGCGGCGAGTAACGTGTACAGCTTCGGTGTCATTCTGTTCGAGACGATG
                      ____________________________________________________________
consensus             ATGCATTCCAATGCGGCGAGTAACGTGTACAGCTTCGGTGTCATTCTGTTCGAGACGATG
 
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rJMSF012K21+          ACGGGTCGCCTGCCTTACTCCGACAGCACCAGCTCTCTCGAAGACTGGGCGTCGCACTAC
rJMSF051E10+          ACGGGTCGCCTGCCTTACTCCGACAGCACCAGCTCTCTCGAAGACTGGGCGTCGCACTAC
                      ____________________________________________________________
consensus             ACGGGTCGCCTGCCTTACTCCGACAGCACCAGCTCTCTCGAAGACTGGGCGTCGCACTAC
 
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rJMSF012K21+          CTTAGAGGAGGGCAATCTATGCGTGAAATGGCCGACCCCACTTTGGATTCTTTCGAAGAG
rJMSF051E10+          CTTAGAGGAGGGCAATCTATGCGTGAAATGGCCGACCCCACTTTGGATTCTTTCGAAGAG
                      ____________________________________________________________
consensus             CTTAGAGGAGGGCAATCTATGCGTGAAATGGCCGACCCCACTTTGGATTCTTTCGAAGAG
 
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rJMSF012K21+          GATAAGATCAATAGAATTGGGGAAGTAATTAGGTTATGTGTTCATCCTCAGCCAAGACTA
rJMSF051E10+          GATAAGATCAATAGAATTGGGGAAGTAATTAGGTTATGTGTTCATCCTCAGCCAAGACTA
                      ____________________________________________________________
consensus             GATAAGATCAATAGAATTGGGGAAGTAATTAGGTTATGTGTTCATCCTCAGCCAAGACTA
 
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rJMSF012K21+          AGGCCAGCCATGAGAGAAGTTACTGCTAGATTGAGAGAAATAACTGAGATAGGACCTGAT
rJMSF051E10+          AGGCCAGCCATGAGAGAAGTTACTGCTAGATTGAGAGAAATAACTGAGATAGGACCTGAT
                      ____________________________________________________________
consensus             AGGCCAGCCATGAGAGAAGTTACTGCTAGATTGAGAGAAATAACTGAGATAGGACCTGAT
 
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rJMSF012K21+          GGAGCAATCCCTAAAGTTTCTCCTCTTTGGTGGGCAGAGCTAGAGATTATATCTAGTGAG
rJMSF051E10+          GGAGCAATCCCTAAAGTTTCTCCTCTTTGGTGGGCAGAGCTAGAGATTATATCTAGTGAG
                      ____________________________________________________________
consensus             GGAGCAATCCCTAAAGTTTCTCCTCTTTGGTGGGCAGAGCTAGAGATTATATCTAGTGAG
 
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rJMSF012K21+          ACATCTTAAGAGTAACTTTNTAGGCGATGTTTAGTTTACGGGATGTAAGATTCTTTTCGA
rJMSF051E10+          ACATCTTAAGAGTAACTTTTTAGGCGATGTTTAGTTTACGGGATGTAAGATTCTTTTCGA
                      ____________________________________________________________
consensus             ACATCTTAAGAGTAACTTTTTAGGCGATGTTTAGTTTACGGGATGTAAGATTCTTTTCGA
 
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rJMSF012K21+          AATGTAGTGTGAGAATACGATAATGTAAAAGTATCTTGTATGNTTANGCATGAGACCCCC
rJMSF051E10+          AATGTAGTGTGAGAATACGATAATGTAAAAGTATCTTGTATGTTTATGCATGAGACCCCC
                      ____________________________________________________________
consensus             AATGTAGTGTGAGAATACGATAATGTAAAAGTATCTTGTATGTTTATGCATGAGACCCCC
 
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rJMSF012K21+          ACTATCCTTGTAGGGTAGGCTAAAATTGTAAATAGT                        
rJMSF051E10+          ACTATCCTTGTAGGGTAGGCTAAAATTGTAAATAGTTGAAACTGGGAAAGATTGGTAGAC
                      ____________________________________________________________
consensus             ACTATCCTTGTAGGGTAGGCTAAAATTGTAAATAGTTGAAACTGGGAAAGATTGGTAGAC