Contig 004416:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF051A18+                                                CTNGGATTTGTGAGTCAAGGAA
                      ____________________________________________________________
consensus                                                   CTNGGATTTGTGAGTCAAGGAA
 
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rJMSF051A18+          ATGAATTTTCATACTACATGATGATCTGCTCCAGTTTTATTCTTAATGCCACTCAAACCG
                      ____________________________________________________________
consensus             ATGAATTTTCATACTACATGATGATCTGCTCCAGTTTTATTCTTAATGCCACTCAAACCG
 
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rJMSF051A18+          CTAGGGAGTGGACCATCTTTCCTTGGATACACAGCAATTGCAATTCACTTTCAGATAATG
rJMSF051C17+                                                           TTCAGATAATG
                      ____________________________________________________________
consensus             CTAGGGAGTGGACCATCTTTCCTTGGATACACAGCAATTGCAATTCACTTTCAGATAATG
 
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rJMSF051A18+          ATCTGCTTCGCCCTGTGTCAATTCCAGATATTCACCCTGCTAGTGCAGGAATTACTGAAG
rJMSF051C17+          ATCTGCTTCGCCCTGTGTCAATTCCAGATATTCACCCTGCTAGTGCAGGAATTACTGAAG
                      ____________________________________________________________
consensus             ATCTGCTTCGCCCTGTGTCAATTCCAGATATTCACCCTGCTAGTGCAGGAATTACTGAAG
 
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rJMSF051A18+          GTTTTTCTATGTGTGGTGGTGATTTTGTTGAAGTTTACAGTGATCCAAGTCAAGAAGGAT
rJMSF051C17+          GTTTTTCTATGTGTGGTGGTGATTTTGTTGAAGTTTACAGTGATCCAAGTCAAGAAGGAT
                      ____________________________________________________________
consensus             GTTTTTCTATGTGTGGTGGTGATTTTGTTGAAGTTTACAGTGATCCAAGTCAAGAAGGAT
 
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rJMSF051A18+          ATTGGGATGCAGTCGTCACTTGTTTCTTCCTTGATACTGCACACAACATTGTTGAATACA
rJMSF051C17+          ATTGGGATGCAGTCGTCACTTGTTTCTTCCTTGATACTGCACACAACATTGTTGAATACA
                      ____________________________________________________________
consensus             ATTGGGATGCAGTCGTCACTTGTTTCTTCCTTGATACTGCACACAACATTGTTGAATACA
 
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rJMSF051A18+          TTGAGGTCATTTCAAAAATTTTAAAAGATGGTGGAGTCTGGATAAACCTGGGGCCCTTGC
rJMSF051C17+          TTGAGGTCATTTCAAAAATTTTAAAAGATGGTGGAGTCTGGATAAACCTGGGGCCCTTGC
                      ____________________________________________________________
consensus             TTGAGGTCATTTCAAAAATTTTAAAAGATGGTGGAGTCTGGATAAACCTGGGGCCCTTGC
 
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rJMSF051A18+          TCTATCATTTTGCTGATATGTACAGTCTGGAAGATGAAATGTCAATTGAGCTAAGTCTAG
rJMSF051C17+          TCTATCATTTTGCTGATATGTACAGTCTGGAAGATGAAATGTCAATTGAGCTAAGTCTAG
                      ____________________________________________________________
consensus             TCTATCATTTTGCTGATATGTACAGTCTGGAAGATGAAATGTCAATTGAGCTAAGTCTAG
 
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rJMSF051A18+          AGGATGTGAAAAAGGTTGCTCTTCATTATGGATTTGAATTTGAGAAAGAATCAACTATTG
rJMSF051C17+          AGGATGTGAAAAAGGTTGCTCTTCATTATGGATTTGAATTTGAGAAAGAATCAACTATTG
                      ____________________________________________________________
consensus             AGGATGTGAAAAAGGTTGCTCTTCATTATGGATTTGAATTTGAGAAAGAATCAACTATTG
 
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rJMSF051A18+          AGACAACTTACACAACCAATCCACGCTCAATGAT----CATCGATACTACACTGCCTTTT
rJMSF051C17+          AGACAACTTACACAACCAATCCACGCTCAATGATGCAACATCGATACTACACTGCCTTTT
                      ____________________________________________________________
consensus             AGACAACTTACACAACCAATCCACGCTCAATGATGCAACATCGATACTACACTGCCTTTT
 
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rJMSF051A18+          GGACGATGAGAAAGAAAACAACTCCAGCTTAAGAGCAGTGGTGCATAGACTTCTCATGCA
rJMSF051C17+          GGACGATGAGAAAGAAAACAACTCCAGCTTAAGAGCAGTGGTGCATAGACTTCTCATGCA
                      ____________________________________________________________
consensus             GGACGATGAGAAAGAAAACAACTCCAGCTTAAGAGCAGTGGTGCATAGACTTCTCATGCA
 
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rJMSF051A18+          CATAACACCAAAGAACGAATGCTCTGCCATTTCTGGTTGTTTTCAGGTTGCAAGAGTGTG
rJMSF051C17+          CATAACACCAAAGAACGAATGCTCTGCCATTTCTGGTTGTTTTCAGGTTGCAAGAGTGTG
                      ____________________________________________________________
consensus             CATAACACCAAAGAACGAATGCTCTGCCATTTCTGGTTGTTTTCAGGTTGCAAGAGTGTG
 
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rJMSF051A18+          AGATTGGAATGCAATTCTTGTATTATTACCGCT                           
rJMSF051C17+          AGATTGGAATGCAGTTCTTGTATTATTACCGCTTGATTGCACTTATATTTAAGATATTGC
                      ____________________________________________________________
consensus             AGATTGGAATGCAGTTCTTGTATTATTACCGCTTGATTGCACTTATATTTAAGATATTGC
 
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rJMSF051C17+          TATTCTTTAGACTTGATTCTGGGATATAAACTTCATATTTCTTTTTATCTTACTTTCGTG
                      ____________________________________________________________
consensus             TATTCTTTAGACTTGATTCTGGGATATAAACTTCATATTTCTTTTTATCTTACTTTCGTG
 
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rJMSF051C17+          TTTGTTTGGCGATTTCAGATGCTAAATGAAGGAAATGGTTTCCTTATGTACGATACTCTT
                      ____________________________________________________________
consensus             TTTGTTTGGCGATTTCAGATGCTAAATGAAGGAAATGGTTTCCTTATGTACGATACTCTT