Contig 004414:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF050O18+                                                       GAGNCCANCAAAGAA
                      ____________________________________________________________
consensus                                                          GAGNCCANCAAAGAA
 
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rJMSF050O18+          AGTTCAGCCCAGAATGAGGNTCANGAAAGTCATAGTGTTAATGAAGTTGTGGGCGGAGAA
                      ____________________________________________________________
consensus             AGTTCAGCCCAGAATGAGGNTCANGAAAGTCATAGTGTTAATGAAGTTGTGGGCGGAGAA
 
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rJMSF050O18+          AATCAATTGTCGAANTCAGCATCAAGTGAAGGCGCGGGCAATGAACAGCACCAAGAACAA
                      ____________________________________________________________
consensus             AATCAATTGTCGAANTCAGCATCAAGTGAAGGCGCGGGCAATGAACAGCACCAAGAACAA
 
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rJMSF050O18+          AACTCTACCCCCGGATCTACACAAACTGGCCAAACTGCTGATACTAGTGGGGATGGTGCA
                      ____________________________________________________________
consensus             AACTCTACCCCCGGATCTACACAAACTGGCCAAACTGCTGATACTAGTGGGGATGGTGCA
 
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rJMSF050O18+          AATATTGTCAAAGAACAAAGTGAGAAAAAGGATGTTTCGAACACTGGGGATTCAGGTTCA
                      ____________________________________________________________
consensus             AATATTGTCAAAGAACAAAGTGAGAAAAAGGATGTTTCGAACACTGGGGATTCAGGTTCA
 
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rJMSF050O18+          AACTCAAATTCAGAATCTACATCTGGTGGACAAAATGGCAACTCAGGCTCAGCCGGCACA
                      ____________________________________________________________
consensus             AACTCAAATTCAGAATCTACATCTGGTGGACAAAATGGCAACTCAGGCTCAGCCGGCACA
 
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rJMSF050O18+          ACAGAGAATGGTGCTAACAATTCACCCGTAGATCAGAATACCAATCCCAATTCTGCCTCA
                      ____________________________________________________________
consensus             ACAGAGAATGGTGCTAACAATTCACCCGTAGATCAGAATACCAATCCCAATTCTGCCTCA
 
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rJMSF004F04+                      AAAATACAAANTCCTGGTNAAANCAAATCAACAGACTNTTCAAGNTCA
rJMSF050O18+          AACGACAACAACAAAATACAAAATCCTGGTGAAAACAAATCAACAGACTCTTCAAGCTCA
                      ____________________________________________________________
consensus             AACGACAACAACAAAATACAAAATCCTGGTGAAAACAAATCAACAGACTCTTCAAGCTCA
 
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rJMSF004F04+          AATGGGAATACAGATAATGCCCAACATAACCAAGCTTAACTGTTCCACTTCAATTCCCCA
rJMSF050O18+          AATGGGAATACAGATAATGCCCAACATAACCAAGCTTAACTGTTCCACTTCAATTCCCCA
                      ____________________________________________________________
consensus             AATGGGAATACAGATAATGCCCAACATAACCAAGCTTAACTGTTCCACTTCAATTCCCCA
 
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rJMSF004F04+          GGAAGAGAANGACGCTGGTACAGATTTGGGTAGTTTGCCACGCTCANCAACTGANGAAAA
rJMSF050O18+          GGAAGAGAATGACGCTGGTACAGATTTGGGTAGTTTGCCACGCTCAGCAACTGAAGAAAA
                      ____________________________________________________________
consensus             GGAAGAGAATGACGCTGGTACAGATTTGGGTAGTTTGCCACGCTCAGCAACTGAAGAAAA
 
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rJMSF004F04+          TAGCCATACAGATGCTTCNGCAAAGTTATAGATTGTGCTTTTCTTTTAAAGGTTNNAAGG
rJMSF050O18+          TAGCCATACAGATGCTTCTGCAAAGTTATAGATTGTGCTTTTCTTTTAAAGGTTTAAAGG
                      ____________________________________________________________
consensus             TAGCCATACAGATGCTTCTGCAAAGTTATAGATTGTGCTTTTCTTTTAAAGGTTTAAAGG
 
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rJMSF004F04+          TTTTAGGCATGTAACATTAAAGTTTC                                  
rJMSF050O18+          TTTTAGGCATGTAACATTAAAGTTTCATTTGATTTTGTTTTCTTTTCCACATGTTATCAA
                      ____________________________________________________________
consensus             TTTTAGGCATGTAACATTAAAGTTTCATTTGATTTTGTTTTCTTTTCCACATGTTATCAA