Contig 004413:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031L12Sequence630005167 (2)ref|XP_010660689.1|5e-14PREDICTED: aspartokinase 2, chloroplastic isoform X1 [Vitis vinifera]743004413 (2)ref|XP_011097258.1|3e-136PREDICTED: aspartokinase 2, chloroplastic isoform X1 [Sesamum indicum]
JMSF050N17Sequence668005167 (2)ref|XP_010660689.1|1e-36PREDICTED: aspartokinase 2, chloroplastic isoform X1 [Vitis vinifera]764004413 (2)ref|XP_011097258.1|1e-137PREDICTED: aspartokinase 2, chloroplastic isoform X1 [Sesamum indicum]

Alignment

This contig is upended


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rJMSF031L12+                                              CGAGGCAGCTGAACTTGCTTATTT
rJMSF050N17+                          TGTGCCATATTTACCNTNGACGAGGCAGCTGAACTTGCTTATTT
                      ____________________________________________________________
consensus                             TGTGCCATATTTACCNTNGACGAGGCAGCTGAACTTGCTTATTT
 
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rJMSF031L12+          TGGTGCACAGGTGCTCCATCCACAGTCAATGAGGCCTGCAAGAGAGGGTGGCATTCCTGT
rJMSF050N17+          TGGTGCACAGGTGCTCCATCCACAGTCAATGAGGCCTGCAAGAGAGGGTGGCATTCCTGT
                      ____________________________________________________________
consensus             TGGTGCACAGGTGCTCCATCCACAGTCAATGAGGCCTGCAAGAGAGGGTGGCATTCCTGT
 
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rJMSF031L12+          TAGGGTCAAAAACTCATATAATCCAAAAGCTCCTGGTACCCTAATTACAAAAACAAGAGA
rJMSF050N17+          TAGGGTCAAAAACTCATATAATCCAAAAGCTCCTGGTACCCTAATTACAAAAACAAGAGA
                      ____________________________________________________________
consensus             TAGGGTCAAAAACTCATATAATCCAAAAGCTCCTGGTACCCTAATTACAAAAACAAGAGA
 
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rJMSF031L12+          TATGAGTGAGGCAGTACTAACCAGCATTGTTTTGAAACGAAATGTCACGATGTTGGATAT
rJMSF050N17+          TATGAGTGAGGCAGTACTAACCAGCATTGTTTTGAAACGAAATGTCACGATGTTGGATAT
                      ____________________________________________________________
consensus             TATGAGTGAGGCAGTACTAACCAGCATTGTTTTGAAACGAAATGTCACGATGTTGGATAT
 
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rJMSF031L12+          TGCCAGCACCCGCATGCTTGGTCAATATGGTTTCCTTGCAAAGGTTTTCTCTATCTTTGA
rJMSF050N17+          TGCCAGCACCCGCATGCTTGGTCAATATGGTTTCCTTGCAAAGGTTTTCTCTATCTTTGA
                      ____________________________________________________________
consensus             TGCCAGCACCCGCATGCTTGGTCAATATGGTTTCCTTGCAAAGGTTTTCTCTATCTTTGA
 
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rJMSF031L12+          AGATTTAGGCATATCAGTTGATGTTGTTGCGACAAGTGAAGTTAGTATCTCTCTGACACT
rJMSF050N17+          AGATTTAGGCATATCAGTTGATGTTGTTGCGACAAGTGAAGTTAGTATCTCTCTGACACT
                      ____________________________________________________________
consensus             AGATTTAGGCATATCAGTTGATGTTGTTGCGACAAGTGAAGTTAGTATCTCTCTGACACT
 
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rJMSF031L12+          GGACCCATCAAAACTCTGGAGCAGAGATCTGATTCAGCAGGCAAGCGAGCTTGATCACGT
rJMSF050N17+          GGACCCATCAAAACTCTGGAGCAGAGATCTGATTCAGCAGGCAAGCGAGCTTGATCACGT
                      ____________________________________________________________
consensus             GGACCCATCAAAACTCTGGAGCAGAGATCTGATTCAGCAGGCAAGCGAGCTTGATCACGT
 
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rJMSF031L12+          TGTAGAAGAACTTGAGAAAATTGCAGTTGTGAATCTTCTTCAGCACAGATCAATTATCTC
rJMSF050N17+          TGTAGAAGAACTTGAGAAAATTGCAGTTGTGAATCTTCTTCAGCACAGATCAATTATCTC
                      ____________________________________________________________
consensus             TGTAGAAGAACTTGAGAAAATTGCAGTTGTGAATCTTCTTCAGCACAGATCAATTATCTC
 
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rJMSF031L12+          TCTAATTGGGAATGTCCAGAGGTCCTCTCTAATTCTAGAAAAGGCTTTCCATGTTCTTCT
rJMSF050N17+          TCTAATTGGGAATGTCCAGAGGTCCTCTCTAATTCTAGAAAAGGCTTTCCATGTTCTTCT
                      ____________________________________________________________
consensus             TCTAATTGGGAATGTCCAGAGGTCCTCTCTAATTCTAGAAAAGGCTTTCCATGTTCTTCT
 
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rJMSF031L12+          TACCAATGGGGTTAATGTTCAGATGATTTCCCAAGGAGCATCGAAGGTCAATATTTCATT
rJMSF050N17+          TACCAATGGGGTTAATGTTCAGATGATTTCCCAAGGAGCATCGAAGGTCAATATTTCATT
                      ____________________________________________________________
consensus             TACCAATGGGGTTAATGTTCAGATGATTTCCCAAGGAGCATCGAAGGTCAATATTTCATT
 
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rJMSF031L12+          GATAGTGAACGACAGTGAAGCAGAGCAGTGCGTTGAAGCTCTTCACTCTGCCTTCTTTGA
rJMSF050N17+          GATAGTGAACGACAGTGAAGCAGAGCAGTGCGTTGAAGCTCTTCACTCTGCCTTCTTTGA
                      ____________________________________________________________
consensus             GATAGTGAACGACAGTGAAGCAGAGCAGTGCGTTGAAGCTCTTCACTCTGCCTTCTTTGA
 
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rJMSF031L12+          GAGTGATCTCTCTAAACTAGTTTCGGATTAGAAATCTCAAAATGGTTCCTCTTCTGATTT
rJMSF050N17+          GAGTGATCTCTCTAAACTAGTTTCGGATTAGAAATCTCAAAATGGTTCCTCTTCTGATTT
                      ____________________________________________________________
consensus             GAGTGATCTCTCTAAACTAGTTTCGGATTAGAAATCTCAAAATGGTTCCTCTTCTGATTT
 
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rJMSF031L12+          TCCAAATTAACTTGGATTATTGTTGTGTATACTCAAAGTGACATTCATAGTTGTGTATA 
rJMSF050N17+          TCCAAATTAACTTGGATTATTGTTGTGTATACTCAAAGTGACATTCATAGTTGTGTATAC
                      ____________________________________________________________
consensus             TCCAAATTAACTTGGATTATTGTTGTGTATACTCAAAGTGACATTCATAGTTGTGTATAC