| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026I24 | Sequence | 374 | 004408 (9) | ref|XP_006359064.1| | 120 | PREDICTED: 60S acidic ribosomal protein P3-like [Solanum tuberosum] | 547 | 004408 (9) | ref|XP_006359064.1| | 120 | PREDICTED: 60S acidic ribosomal protein P3-like [Solanum tuberosum] |
| JMFN008N02 | Sequence | 592 | 004408 (9) | ref|XP_006359064.1| | 119 | PREDICTED: 60S acidic ribosomal protein P3-like [Solanum tuberosum] | |||||
| JMSF009C24 | Sequence | 308 | 004408 (9) | 701 | 020304 | ref|XP_006344710.1| | 4e-09 | PREDICTED: pre-mRNA-splicing factor 38A-like [Solanum tuberosum] | |||
| JMSF023A03 | Sequence | 575 | 004408 (9) | ref|XP_006359064.1| | 119 | PREDICTED: 60S acidic ribosomal protein P3-like [Solanum tuberosum] | 526 | 004408 (9) | ref|XP_006359064.1| | 119 | PREDICTED: 60S acidic ribosomal protein P3-like [Solanum tuberosum] |
| JMSF050F23 | Sequence | 579 | 004408 (9) | ref|XP_006359064.1| | 120 | PREDICTED: 60S acidic ribosomal protein P3-like [Solanum tuberosum] | 526 | 004408 (9) | ref|XP_006359064.1| | 120 | PREDICTED: 60S acidic ribosomal protein P3-like [Solanum tuberosum] |
| JMSF052E16 | Sequence | 330 | 004408 (9) | ||||||||
This contig is upended
. : . : . : . : . : . :
JMSF052E16+ TTTTTTTTTTGNNN
____________________________________________________________
consensus TTTTTTTTTTGNNN
. : . : . : . : . : . :
JMSF052E16+ TNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
____________________________________________________________
consensus TNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
. : . : . : . : . : . :
JMSF052E16+ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAGAATCCAAAGCACTTAGAAACGTT
JMFN008N02- GAATCCAAAGCACTTAGAAACGTT
JMSF009C24+ GAATCCAAAGCACTTAGAAACGTT
JMSF023A03+ TGAAAAGAATCCAAAGCACTTAGAAACGTT
rJMFF026I24- CTTAGAAACGTT
JMSF050F23+ TGAAAAGAATCCAAAGCACTTAGAAACGTT
____________________________________________________________
consensus TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAGAATCCAAAGCACTTAGAAACGTT
. : . : . : . : . : . :
JMSF052E16+ ATAATAATAAGTCATATGGGTCTCAAATCTATCAAAAAAAAGATCAAAATCATGCCAAAA
JMFN008N02- ATAATAATAAGTCATATGGGTCTCAAATCTATCAAAAAAAAGATCAAAATCATGCCAAAA
rJMSF023A03- GTCATATGGGTCTCAAATCTATCAAAAAAAAGATCAAAATCATGCCAAAA
JMSF009C24+ ATAATAATAAGTCATATGGGTCTCAAATCTATCAAAAAAAAGATCAAAATCATGCCAAAA
JMSF023A03+ ATAATAATAAGTCATATGGGTCTCAAATCTATCAAAAAAAAGATCAAAATCATGCCAAAA
rJMFF026I24- ATAATAATAAGTCATATGGGTCTCAAATCTATCAAAAAAAAGATCAAAATCATGCCAAAA
JMSF050F23+ ATAATAATAAGTCATATGGGTCTCAAATCTATCAAAAAAAAGATCAAAATCATGCCAAAA
rJMSF050F23- TATGGGTCTCAAATCTATCAAAAAAAAGATCAAAATCATGCCAAAA
____________________________________________________________
consensus ATAATAATAAGTCATATGGGTCTCAAATCTATCAAAAAAAAGATCAAAATCATGCCAAAA
. : . : . : . : . : . :
JMSF052E16+ CAGCAGTTTTCAAAAACAGATAGCAGCACATAATTCATTAGCGTATAGCACCTAACTAAT
JMFN008N02- CAGCAGTTTTCAAAAACAGATAGCAGCACATAATTCATTAGCGTATAGCACCTAACTAAT
rJMSF023A03- CAGCAGTTTTCAAAAACAGATAGCAGCACATAATTCATTAGCGTATAGCACCTAACTAAT
JMSF009C24+ CAGCAGTTTTCAAAAACAGATAGCAGCACATAATTCATTAGCGTATAGCACCTAACTAAT
JMSF023A03+ CAGCAGTTTTCAAAAACAGATAGCAGCACATAATTCATTAGCGTATAGCACCTAACTAAT
rJMFF026I24- CAGCAGTTTTCAAAAACAGATAGCAGCACATAATTCATTAGCGTATAGCACCTAACTAAT
JMSF050F23+ CAGCAGTTTTCAAAAACAGATAGCAGCACATAATTCATTAGCGTATAGCACCTAACTAAT
rJMSF050F23- CAGCAGTTTTCAAAAACAGATAGCAGCACATAATTCATTAGCGTATAGCACCTAACTAAT
____________________________________________________________
consensus CAGCAGTTTTCAAAAACAGATAGCAGCACATAATTCATTAGCGTATAGCACCTAACTAAT
. : . : . : . : . : . :
JMSF052E16+ CAAAGAGTGAGAATCCCATATCGTCATCACTCTCTTCCTTCTCTTCCTTTTTCTCATCAG
JMFN008N02- CAAAGAGTGAGAATCCCATATCGTCATCACTCTCTTCCTTCTCTTCCTTTTTCTCATCAG
rJMSF023A03- CAAAGAGTGAGAATCCCATATCGTCATCACTCTCTTCCTTCTCTTCCTTTTTCTCATCAG
JMSF009C24+ CAAAGAGTGAGAATCCCATATCGTCATCACTCTCTTCCTTCTCTTCCTTTTTCTCATCAG
JMSF023A03+ CAAAGAGTGAGAATCCCATATCGTCATCACTCTCTTCCTTCTCTTCCTTTTTCTCATCAG
JMFF026I24+ TCTTCCTTTTTNTCATCAG
rJMFF026I24- CAAAGAGTGAGAATCCCATATCGTCATCACTCTCTTCCTTCTCTTCCTTTTTCTCATCAG
JMSF050F23+ CAAAGAGTGAGAATCCCATATCGTCATCACTCTCTTCCTTCTCTTCCTTTTTCTCATCAG
rJMSF050F23- CAAAGAGTGAGAATCCCATATCGTCATCACTCTCTTCCTTCTCTTCCTTTTTCTCATCAG
____________________________________________________________
consensus CAAAGAGTGAGAATCCCATATCGTCATCACTCTCTTCCTTCTCTTCCTTTTTCTCATCAG
. : . : . : . : . : . :
JMSF052E16+ CTGGAGGAGCTTCAGC
JMFN008N02- CTGGAGGAGCTTCAGCAGCTGCTGCACCGCCAGAAGGAGCTGCTGCTGCAGCTGCCCCAC
rJMSF023A03- CTGGAGGAGCTTCAGCAGCTGCTGCACCGCCAGAAGGAGCTGCTGCTGCAGCTGCCCCAC
JMSF009C24+ CTGGAGGAGCTTCAGCAGCTGCTGCACCGCCAGAAGGAGCTGCTGCTGCAGCTGCCCCAC
JMSF023A03+ CTGGAGGAGCTTCAGCAGCTGCTGCACCGCCAGAAGGAGCTGCTGCTGCAGCTGCCCCAC
JMFF026I24+ CNGGAGGAGCTTCAGCAGCTGCTGCACCGCCAGAAGGAGCTGCTGCTGCAGCTGCCCCAC
rJMFF026I24- CTGGAGGAGCTTCAGCAGCTGCTGCACCGCCAGAAGGAGCTGCTGCTGCAGCTGCCCCAC
JMSF050F23+ CTGGAGGAGCTTCAGCAGCTGCTGCACCGCCAGAAGGAGCTGCTGCTGCAGCTGCCCCAC
rJMSF050F23- CTGGAGGAGCTTCAGCAGCTGCTGCACCGCCAGAAGGAGCTGCTGCTGCAGCTGCCCCAC
____________________________________________________________
consensus CTGGAGGAGCTTCAGCAGCTGCTGCACCGCCAGAAGGAGCTGCTGCTGCAGCTGCCCCAC
. : . : . : . : . : . :
JMFN008N02- CACCTCCAATAAAAGCACCACCACTAGCTCCACCAATAATCACCTGGAAAACGGCGGAGG
rJMSF023A03- CACCTCCAATAAAAGCACCACCACTAGCTCCACCAATAATCACCTGGAAAACGGCGGAGG
JMSF009C24+ CACCTC
JMSF023A03+ CACCTCCAATAAAAGCACCACCACTAGCTCCACCAATAATCACCTGGAAAACGGCGGAGG
JMFF026I24+ CACCTCCAATAAAAGCACCACCACTAGCTCCACCAATAATCACCTGGAAAACGGCGGAGG
rJMFF026I24- CACCTCCAATAAAAGCACCACCACTAGCTCCACCAATAATCACCTGGAAAACGGCGGAGG
JMSF050F23+ CACCTCCAATAAAAGCACCACCACTAGCTCCACCAATAATCACCTGGAAAACGGCGGAGG
rJMSF050F23- CACCTCCAATAAAAGCACCACCACTAGCTCCACCAATAATCACCTGGAAAACGGCGGAGG
____________________________________________________________
consensus CACCTCCAATAAAAGCACCACCACTAGCTCCACCAATAATCACCTGGAAAACGGCGGAGG
. : . : . : . : . : . :
JMFN008N02- TAGGAAGGACGAAGGAGAAGGATGACTGGACGCCGCCGGAGCAGTCTTCGGCGAGAGCGG
rJMSF023A03- TAGGAAGGACGAAGGAGAAGGATGACTGGACGCCGCCGGAGCAGTCTTCGGCGAGAGCGG
JMSF023A03+ TAGGAAGGACGAAGGAGAAGGATGACTGGACGCCGCCGGAGCAGTCTTCGGCGAGAGCGG
JMFF026I24+ TAGGAAGGACGAAGGAGAAGGATGACTGGACGCCGCCGGAGCAGTCTTCGGCGAGAGCGG
rJMFF026I24- TAGGAAGGACGAAGGAGAAGGATGACTGGACGCCGCCGGAGCAGTCTTCGGCGAGAGCGG
JMSF050F23+ TAGGAAGGACGAAGGAGAAGGATGACTGGACGCCGCCGGAGCAGTCTTCGGCGAGAGCGG
rJMSF050F23- TAGGAAGGACGAAGGAGAAGGATGACTGGACGCCGCCGGAGCAGTCTTCGGCGAGAGCGG
____________________________________________________________
consensus TAGGAAGGACGAAGGAGAAGGATGACTGGACGCCGCCGGAGCAGTCTTCGGCGAGAGCGG
. : . : . : . : . : . :
JMFN008N02- CTTGGACGAGCTTGCGCTGGAGATCGTAGGTTGAGCTAGCAGAAGCTTCCAGATCGCCCT
rJMSF023A03- CTTGGACGAGCTTGCGCTGGAGATCGTAGGTTGAGCTAGCAGAAGCTTCCAGATCGCCCT
JMSF023A03+ CTTGGACGAGCTTGCGCTGGAGATCGTAGGTTGAGCTAGCAGAAGCTTCCAGATCGCCCT
JMFF026I24+ CTTGGACGAGCTTGCGCTGGAGATCGTAGGTTGAGCTAGCAGAAGCTTCCAGATCGCCCT
rJMFF026I24- CTTGGACGAGCTTGCGCTGGAGATCGTAGGTTGAGCTAGCAGAAGCTTCCAGATCGCCCT
JMSF050F23+ CTTGGACGAGCTTGCGCTGGAGATCGTAGGTTGAGCTAGCAGAAGCTTCCAGATCGCCCT
rJMSF050F23- CTTGGACGAGCTTGCGCTGGAGATCGTAGGTTGAGCTAGCAGAAGCTTCCAGATCGCCCT
____________________________________________________________
consensus CTTGGACGAGCTTGCGCTGGAGATCGTAGGTTGAGCTAGCAGAAGCTTCCAGATCGCCCT
. : . : . : . : . : . :
JMFN008N02- TAAGCTGCTTAGCAGACCACTCGCTGCCGGAGGCTTTGCAAACGAATGTAAATACTCCCA
rJMSF023A03- TAAGCTGCTTAGCAGACCACTCGCTGCCGGAGGCTTTGCAAACGAATGTAAATACTCCCA
JMSF023A03+ TAAGCTGCTTAGCAGACCACTCGCTGCCGGAGGCTTTGCAAACGAATGTAAATACTCCCA
JMFF026I24+ TAAGCTGCTTAGCAGACCACTCGCTGCCGGAGGCTTTGCAAACGAATGTAAATACTCCCA
rJMFF026I24- TAAGCTGCTTAGCAGACCACTCGCTGCCGGAGGCTTTGCAAACGAATGTAAATACTCCCA
JMSF050F23+ TAAGCTGCTTAGCAGACCACTCGCTGCCGGAGGCTTTGCAAACGAATGTAAATACTCCCA
rJMSF050F23- TAAGCTGCTTAGCAGACCACTCGCTGCCGGAGGCTTTGCAAACGAATGTAAATACTCCCA
____________________________________________________________
consensus TAAGCTGCTTAGCAGACCACTCGCTGCCGGAGGCTTTGCAAACGAATGTAAATACTCCCA
. : . : . : . : . : . :
JMFN008N02- TTTTCTCCAAATCTCGCTCGCTGGCTCTCGGATTTTCTGCTTGAG
rJMSF023A03- TTTTCTCCAAATCTCGCTCGCTGGCTCTCGGATTTTCTGCTTGAGAATGGGCG
JMSF023A03+ TTTTCTCCAAATCTCGCTCGCTGGCTCTCGGATTTTCTGCTTGAGAATGGGCG
JMFF026I24+ TTTTCTCCAAATCTCGCTCGCTGGCTCTCGGATTTTCTGCTTGAGAATGGACGTT
rJMFF026I24- TTTTCTCCAAATCTCGCTCGCTGGCTCTCGGATTTTCTGCTTGAGAATGGACGTT
JMSF050F23+ TTTTCTCCAAATCTCGCTCGCTGGCTCTCGGATTTTCTGCTTGAGAATGGGCGTT
rJMSF050F23- TTTTCTCCAAATCTCGCTCGCTGGCTCTCGGATTTTCTGCTTGAGAATGGGCGTTAGTTC
____________________________________________________________
consensus TTTTCTCCAAATCTCGCTCGCTGGCTCTCGGATTTTCTGCTTGAGAATGGGCGTTAGTTC