Contig 004403:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007J17Sequence327004970 (3)ref|XP_009601411.1|7e-15PREDICTED: ABC transporter G family member 32-like [Nicotiana tomentosiformis]739004403 (2)ref|XP_009601411.1|3e-82PREDICTED: ABC transporter G family member 32-like [Nicotiana tomentosiformis]
JMSF049M07Sequence703004970 (3)ref|XP_009788682.1|7e-79PREDICTED: ABC transporter G family member 32-like [Nicotiana sylvestris]714004403 (2)ref|XP_009601411.1|1e-63PREDICTED: ABC transporter G family member 32-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF007J17+                                                   ATTCGCTTTTGCACAGGTT
                      ____________________________________________________________
consensus                                                      ATTCGCTTTTGCACAGGTT
 
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rJMSF007J17+          ACTGTCGAGTTCCCCTACGTGTTCGTGCAGACGCTAATTTACAGCACGATCTTCTACTTC
                      ____________________________________________________________
consensus             ACTGTCGAGTTCCCCTACGTGTTCGTGCAGACGCTAATTTACAGCACGATCTTCTACTTC
 
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rJMSF007J17+          ATGGCGTCGTTCGAGTGGAACGCTTGGAAGTTTGTTTGGTACATATGTTTCATGTTCCTC
rJMSF049M07+                TCGTTCGAGTGGAACGCTTGGAAGTTTGTTTGGTACATATGTTTCATGTTCCTC
                      ____________________________________________________________
consensus             ATGGCGTCGTTCGAGTGGAACGCTTGGAAGTTTGTTTGGTACATATGTTTCATGTTCCTC
 
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rJMSF007J17+          ACTTTACTATACTTCACTTTCTTTGGAATGATGACCACTGCTGTCACCCCAAACCACAAC
rJMSF049M07+          ACTTTACTATACTTCACTTTCTTTGGAATGATGACCACTGCTGTCACCCCAAACCACAAC
                      ____________________________________________________________
consensus             ACTTTACTATACTTCACTTTCTTTGGAATGATGACCACTGCTGTCACCCCAAACCACAAC
 
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rJMSF007J17+          ATTGCTGCCATCATCGCTGCGCCCTTCTATATGATGTGGAATCTCTTCAGCGGTTTCATG
rJMSF049M07+          ATTGCTGCCATCATCGCTGCGCCCTTCTATATGATGTGGAATCTCTTCAGCGGTTTCATG
                      ____________________________________________________________
consensus             ATTGCTGCCATCATCGCTGCGCCCTTCTATATGATGTGGAATCTCTTCAGCGGTTTCATG
 
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rJMSF007J17+          ATTTCGCGCATGAGAATCCCGATATGGTGGAGATGGTACTACTGGGCAAACCCGGTGGCA
rJMSF049M07+          ATTTCGCGCATGAGAATCCCGATATGGTGGAGATGGTACTACTGGGCAAACCCGGTGGCA
                      ____________________________________________________________
consensus             ATTTCGCGCATGAGAATCCCGATATGGTGGAGATGGTACTACTGGGCAAACCCGGTGGCA
 
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rJMSF007J17+          TGGAGTCTATACGGGCTTCTAACGTCACAGTATGGAGATGTAAATGACAATGTGAGACTA
rJMSF049M07+          TGGAGTCTATACGGGCTTCTAACGTCACAGTATGGAGATGTAAATGACAATGTGAGACTA
                      ____________________________________________________________
consensus             TGGAGTCTATACGGGCTTCTAACGTCACAGTATGGAGATGTAAATGACAATGTGAGACTA
 
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rJMSF007J17+          CCTGATGGGGTTAACTCTCTGCCAATCAAAGACTTTCTCAGAGAGGAGTTCGGGTTCAGG
rJMSF049M07+          CCTGATGGGGTTAACTCTCTGCCAATCAAAGACTTTCTCAGAGAGGAGTTCGGGTTCAGG
                      ____________________________________________________________
consensus             CCTGATGGGGTTAACTCTCTGCCAATCAAAGACTTTCTCAGAGAGGAGTTCGGGTTCAGG
 
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rJMSF007J17+          CACGATTTCCTGGGCGTTGCGATTGTCGCTGTGTGCGGTTTCTGCCTGCTTTTCGCAGTC
rJMSF049M07+          CACGATTTCCTGGGCGTTGCGATTGTCGCTGTGTGCGGTTTCTGCCTGCTTTTCGCAGTC
                      ____________________________________________________________
consensus             CACGATTTCCTGGGCGTTGCGATTGTCGCTGTGTGCGGTTTCTGCCTGCTTTTCGCAGTC
 
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rJMSF007J17+          ATATTCGGTTTTGCAATAAAATACTTCAACTTCCAGAGAAGGTGAAGAGCACTGGACCTA
rJMSF049M07+          ATATTCGGTTTTGCAATAAAATACTTCAACTTCCAGAGAAGGTGAAGAGCACTGGACCTA
                      ____________________________________________________________
consensus             ATATTCGGTTTTGCAATAAAATACTTCAACTTCCAGAGAAGGTGAAGAGCACTGGACCTA
 
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rJMSF007J17+          ACTTTTGACACACATTATAAGATTATTAATGCTTTTCTTTCAGTATATCAAAGAGAGGAA
rJMSF049M07+          ACTTTTGACACACATTATAAGATTATTAATGCTTTTCTTTCAGTATATCAAAGAGAGGAA
                      ____________________________________________________________
consensus             ACTTTTGACACACATTATAAGATTATTAATGCTTTTCTTTCAGTATATCAAAGAGAGGAA
 
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rJMSF007J17+          CTTTGTTGCAGACTAAAGATGGTGCAGCATATAGAACAATAGGATATATATTTACATCTA
rJMSF049M07+          CTTTGTTGCAGACTAAAGATGGTGCAGCATATAGAACAATAGGATATATATTTACATCTA
                      ____________________________________________________________
consensus             CTTTGTTGCAGACTAAAGATGGTGCAGCATATAGAACAATAGGATATATATTTACATCTA
 
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rJMSF007J17+          TATTTATACTTATATCAGTTGAATTTCTGAATATTTCTTCACAAAATGTTAGGAAAAGGA
rJMSF049M07+          TATTTATACTTATATCAGTTGAATTTCTGAATATTTCTTCACAAAATGTTAGGAAAAGGA
                      ____________________________________________________________
consensus             TATTTATACTTATATCAGTTGAATTTCTGAATATTTCTTCACAAAATGTTAGGAAAAGGA
 
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rJMSF049M07+          TTTATATGTTCATTGATTTGTATTTGGATTTGTATAGGAGGATTGAAGGAATTAAAGAAT
                      ____________________________________________________________
consensus             TTTATATGTTCATTGATTTGTATTTGGATTTGTATAGGAGGATTGAAGGAATTAAAGAAT