| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF022P14 | Sequence | 600 | 008082 (3) | gb|EPS63462.1| | 1e-12 | hypothetical protein M569_11322, partial [Genlisea aurea] | 704 | 004402 (4) | ref|XP_009781292.1| | 1e-27 | PREDICTED: zinc finger protein JACKDAW-like isoform X2 [Nicotiana sylvestris] |
| JMSF045M15 | Sequence | 733 | 006705 (6) | ref|XP_004250657.1| | 9e-116 | PREDICTED: eukaryotic initiation factor 4A-3 [Solanum lycopersicum] | 685 | 004402 (4) | ref|XP_009781292.1| | 1e-27 | PREDICTED: zinc finger protein JACKDAW-like isoform X2 [Nicotiana sylvestris] |
| JMSF049I14 | Sequence | 621 | 008082 (3) | ref|XP_002280228.3| | 6e-11 | PREDICTED: beta-galactosidase 17 [Vitis vinifera] | 751 | 004402 (4) | ref|XP_009781292.1| | 1e-27 | PREDICTED: zinc finger protein JACKDAW-like isoform X2 [Nicotiana sylvestris] |
| JMSF049L15 | Sequence | 555 | 008082 (3) | 730 | 004402 (4) | ref|XP_009781292.1| | 1e-27 | PREDICTED: zinc finger protein JACKDAW-like isoform X2 [Nicotiana sylvestris] | |||
This contig is upended
. : . : . : . : . : . :
rJMSF045M15+ CCGATGATGTATGGGTCGTCGCCGATGGAG
rJMSF049L15+ CAGATGGGGNACTCTCCGATGATGTATGGGTCGTCGCCGATGGAG
____________________________________________________________
consensus CAGATGGGGNACTCTCCGATGATGTATGGGTCGTCGCCGATGGAG
. : . : . : . : . : . :
rJMSF045M15+ AGCTTCGGGACGTCGAATCTCTCGCTGTCGCCTCTCGCGCCGCAAGGGCTGCAGGAAACG
rJMSF049L15+ AGCTTCGGGACGTCGAATCTCTCGCTGTCGCCTCTCGCGCCGCAAGGGCTGCAGGAAACG
rJMSF022P14+ CCTCTCGCGCCGCAAGGGCTGCAGGAAACG
rJMSF049I14+ CCTCTCGCGCCGCAAGGGCTGCAGGAAACG
____________________________________________________________
consensus AGCTTCGGGACGTCGAATCTCTCGCTGTCGCCTCTCGCGCCGCAAGGGCTGCAGGAAACG
. : . : . : . : . : . :
rJMSF045M15+ GAGGGGATGGGGATAAGCAAAGGGATGGCGGAAACGTTAAGCTCCATGTATTCCGACAGC
rJMSF049L15+ GAGGGGATGGGGATAAGCAAAGGGATGGCGGAAACGTTAAGCTCCATGTATTCCGACAGC
rJMSF022P14+ GAGGGGATGGGGATAAGCAAAGGGATGGCGGAAACGTTAAGCTCCATGTATTCCGACAGC
rJMSF049I14+ GAGGGGATGGGGATAAGCAAAGGGATGGCGGAAACGTTAAGCTCCATGTATTCCGACAGC
____________________________________________________________
consensus GAGGGGATGGGGATAAGCAAAGGGATGGCGGAAACGTTAAGCTCCATGTATTCCGACAGC
. : . : . : . : . : . :
rJMSF045M15+ CTCCAAACGTCGTCGAAATCCTCGGCGGGGGGGCCGATGTCGGCCACGGCGCTGCTGCAG
rJMSF049L15+ CTCCAAACGTCGTCGAAATCCTCGGCGGGGGGGCCGATGTCGGCCACGGCGCTGCTGCAG
rJMSF022P14+ CTCCAAACGTCGTCGAAATCCTCGGCGGGGGGGCCGATGTCGGCCACGGCGCTGCTGCAG
rJMSF049I14+ CTCCAAACGTCGTCGAAATCCTCGGCGGGGGGGCCGATGTCGGCCACGGCGCTGCTGCAG
____________________________________________________________
consensus CTCCAAACGTCGTCGAAATCCTCGGCGGGGGGGCCGATGTCGGCCACGGCGCTGCTGCAG
. : . : . : . : . : . :
rJMSF045M15+ AAAGCGGCGCAAATGGGGTCCACGAAGAGCGCGCCGACGGCGTTCTTCGGGAACAGCTTC
rJMSF049L15+ AAAGCGGCGCAAATGGGGTCCACGAAGAGCGCGCCGACGGCGTTCTTCGGGAACAGCTTC
rJMSF022P14+ AAAGCGGCGCAAATGGGGTCCACGAAGAGCGCGCCGACGGCGTTCTTCGGGAACAGCTTC
rJMSF049I14+ AAAGCGGCGCAAATGGGGTCCACGAAGAGCGCGCCGACGGCGTTCTTCGGGAACAGCTTC
____________________________________________________________
consensus AAAGCGGCGCAAATGGGGTCCACGAAGAGCGCGCCGACGGCGTTCTTCGGGAACAGCTTC
. : . : . : . : . : . :
rJMSF045M15+ GGGCTCATGACATCCTCCTCGTCTTCCTCGAACAACAGAAGCGGCGAATTGCAGCACATG
rJMSF049L15+ GGGCTCATGACATCCTCCTCGTCTTCCTCGAACAACAGAAGCGGCGAATTGCAGCACATG
rJMSF022P14+ GGGCTCATGACATCCTCCTCGTCTTCCTCGAACAACAGAAGCGGCGAATTGCAGCACATG
rJMSF049I14+ GGGCTCATGACATCCTCCTCGTCTTCCTCGAACAACAGAAGCGGCGAATTGCAGCACATG
____________________________________________________________
consensus GGGCTCATGACATCCTCCTCGTCTTCCTCGAACAACAGAAGCGGCGAATTGCAGCACATG
. : . : . : . : . : . :
rJMSF045M15+ GTGTTCCCGAAAGAGTCGGGGTTCGACAGCGGCGCCGCCGCCGCCGCCGAGCATTCGTCG
rJMSF049L15+ GTGTTCCCGAAAGAGTCGGGGTTCGACAGCGGCGCCGCCGCCGCCGCCGAGCATTCGTCG
rJMSF022P14+ GTGTTCCCGAAAGAGTCGGGGTTCGACAGCGGCGCCGCCGCCGCCGCCGAGCATTCGTCG
rJMSF049I14+ GTGTTCCCGAAAGAGTCGGGGTTCGACAGCGGCGCCGCCGCCGCCGCCGAGCATTCGTCG
____________________________________________________________
consensus GTGTTCCCGAAAGAGTCGGGGTTCGACAGCGGCGCCGCCGCCGCCGCCGAGCATTCGTCG
. : . : . : . : . : . :
rJMSF045M15+ TGTTTAATGCAAAGGCAGCCGCAGGGGGTGTCGTTGAACGGGGTTAACGTTAATGCTCAT
rJMSF049L15+ TGTTTAATGCAAAGGCAGCCGCAGGGGGTGTCGTTGAACGGGGTTAACGTTAATGCTCAT
rJMSF022P14+ TGTTTAATGCAAAGGCAGCCGCAGGGGGTGTCGTTGAACGGGGTTAACGTTAATGCTCAT
rJMSF049I14+ TGTTTAATGCAAAGGCAGCCGCAGGGGGTGTCGTTGAACGGGGTTAACGTTAATGCTCAT
____________________________________________________________
consensus TGTTTAATGCAAAGGCAGCCGCAGGGGGTGTCGTTGAACGGGGTTAACGTTAATGCTCAT
. : . : . : . : . : . :
rJMSF045M15+ CATTTGACCAGAGATTTTCTGGGCATGGGGAGTGAAGACGGGCGGCCATTTTTGGCCGAG
rJMSF049L15+ CATTTGACCAGAGATTTTCTGGGCATGGGGAGTGAAGACGGGCGGCCATTTTTGGCCGAG
rJMSF022P14+ CATTTGACCAGAGATTTTCTGGGCATGGGGAGTGAAGACGGGCGGCCATTTTTGGCCGAG
rJMSF049I14+ CATTTGACCAGAGATTTTCTGGGCATGGGGAGTGAAGACGGGCGGCCATTTTTGGCCGAG
____________________________________________________________
consensus CATTTGACCAGAGATTTTCTGGGCATGGGGAGTGAAGACGGGCGGCCATTTTTGGCCGAG
. : . : . : . : . : . :
rJMSF045M15+ GAGCTTGCCAAGTTCGCGTCCTCCATGGGTTTGAGCCATTTCAGTAGCGGCCATTAGCCA
rJMSF049L15+ GAGCTTGCCAAGTTCGCGTCCTCCATGGGTTTGAGCCATTTCAGTAGCGGCCATTAGCCA
rJMSF022P14+ GAGCTTGCCAAGTTCGCGTCCTCCATGGGTTTGAGCCATTTCAGTAGCGGCCATTAGCCA
rJMSF049I14+ GAGCTTGCCAAGTTCGCGTCCTCCATGGGTTTGAGCCATTTCAGTAGCGGCCATTAGCCA
____________________________________________________________
consensus GAGCTTGCCAAGTTCGCGTCCTCCATGGGTTTGAGCCATTTCAGTAGCGGCCATTAGCCA
. : . : . : . : . : . :
rJMSF045M15+ CCGTTTTGAATTGTTTTGTCGTCGTGAAGTGTCGTCATCATCTCCTTCCTATCTTCCATA
rJMSF049L15+ CCGTTTTGAATTGTTTTGTCGTCGTGAAGTGTCGTCATCATCTCCTTCCTATCTTCCATA
rJMSF022P14+ CCGTTTTGAATTGTTTTGTCGTCGTGAAGTGTCGTCATCATCTCCTTCCTATCTTCCATA
rJMSF049I14+ CCGTTTTGAATTGTTTTGTCGTCGTGAAGTGTCGTCATCATCTCCTTCCTATCTTCCATA
____________________________________________________________
consensus CCGTTTTGAATTGTTTTGTCGTCGTGAAGTGTCGTCATCATCTCCTTCCTATCTTCCATA
. : . : . : . : . : . :
rJMSF045M15+ TCCATACCAGCGCAGTCCTAGCTTGTACTTTCTTAATTAGTAGGCCTTACAATAA
rJMSF049L15+ TCCATACCAGCGCAGTCCTAGCTTGTACTTTCTTAATTAGTAGGCCTTACAATAATGTAT
rJMSF022P14+ TCCATACCAGCGCAGTCCTAGCTTGTACTTTCTTAATTAGTAGGCCTTACAATAATGTAT
rJMSF049I14+ TCCATACCAGCGCAGTCCTAGCTTGTACTTTCTTAATTAGTAGGCCTTACAATAATGTAT
____________________________________________________________
consensus TCCATACCAGCGCAGTCCTAGCTTGTACTTTCTTAATTAGTAGGCCTTACAATAATGTAT
. : . : . : . : . : . :
rJMSF049L15+ CGCAACATTATATCATCATCATCAT
rJMSF022P14+ CGCAACATTATATCATCATCATCATATCCTCTTCAACTCTATCTTAATTCCCATTTTCGT
rJMSF049I14+ CGCAACATTATATCATCATCATCATATCCTCTTCAACTCTATCTTAATTCCCATTTTCGT
____________________________________________________________
consensus CGCAACATTATATCATCATCATCATATCCTCTTCAACTCTATCTTAATTCCCATTTTCGT
. : . : . : . : . : . :
rJMSF022P14+ TTGAGGTCAAATCT
rJMSF049I14+ TTGAGGTCAAATCTTGTATGTATAGGTATTCATCAAATGCAATTTGCCGGTTTCATTGAG
____________________________________________________________
consensus TTGAGGTCAAATCTTGTATGTATAGGTATTCATCAAATGCAATTTGCCGGTTTCATTGAG