Contig 004396:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN004E13Sequence593004396 (2)ref|XP_010658537.1|1e-95PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/m
JMSF047K18Sequence125003669 (4)ref|XP_009630454.1|5e-12PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/m627004396 (2)ref|XP_010658537.1|2e-67PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/m

Alignment

This contig is upended


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JMFN004E13-                                                  CTCTTAGGTTGGATACCGGGG
                      ____________________________________________________________
consensus                                                    CTCTTAGGTTGGATACCGGGG
 
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JMFN004E13-           CCACAGGTTGGAGGTGTTCTTGGTAAAGGAGGAGACCCATCACAGCCAAGGTTCACACAC
rJMSF047K18+                                           GACCCATCACAGCCAAGGTTNACACAC
                      ____________________________________________________________
consensus             CCACAGGTTGGAGGTGTTCTTGGTAAAGGAGGAGACCCATCACAGCCAAGGTTCACACAC
 
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JMFN004E13-           AATGAGTCTGGACGGTTTGAATGTCGCTTTACAAGTGTCGCAATACAAGAATCACCAGCC
rJMSF047K18+          AATGAGTCTNGACGGTTTGAATGTNGCTTTACAAGTGTCGCAATACAAGAATCNCCAGCC
                      ____________________________________________________________
consensus             AATGAGTCTGGACGGTTTGAATGTCGCTTTACAAGTGTCGCAATACAAGAATCACCAGCC
 
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JMFN004E13-           ATAATGTTCAAAGGGATGGAGGGTAGTACTCTAGGTGTCTGGGCAGCGCATGGTGAAGGA
rJMSF047K18+          ATAATGTTCAAAGGGATGGAGGGTAGTNCTCTAGGTGTCTGGGCAGCGCNTGGTGAAGGA
                      ____________________________________________________________
consensus             ATAATGTTCAAAGGGATGGAGGGTAGTACTCTAGGTGTCTGGGCAGCGCATGGTGAAGGA
 
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JMFN004E13-           AGAGCTTATTTCCCTGACGGTAGTATTTTAAATCAGGTTCTTGATTCGAACTTGGCCCCA
rJMSF047K18+          AGAGCTTATTTCCCTGACGGTAGTATTTTAAATCAGGTTCCTGNTTCGNANTTGGCCCCN
                      ____________________________________________________________
consensus             AGAGCTTATTTCCCTGACGGTAGTATTTTAAATCAGGTTCTTGATTCGAACTTGGCCCCA
 
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JMFN004E13-           GTGAGATATTGTGATGATGACGGTAAACCAACAGAAGTTTATCCTTTCAATCTGAATGGT
rJMSF047K18+          GTGAGATNNTGNGANGATGNCGGTAAACCAACAGAAGTTTATCCTTTCAATNTGAATGGT
                      ____________________________________________________________
consensus             GTGAGATATTGTGATGATGACGGTAAACCAACAGAAGTTTATCCTTTCAATCTGAATGGT
 
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JMFN004E13-           TCACCCCTCGGTGTGGCTGCAATTTGTTCTCCCAATGGGAGGCACCTTGCTATGATGCCT
rJMSF047K18+          TCNCCCCTCGGNGNGGNTGCAATTTGTTCTCCCAATGGGAGGCNCCNTGNTNTGATGCCT
                      ____________________________________________________________
consensus             TCACCCCTCGGTGTGGCTGCAATTTGTTCTCCCAATGGGAGGCACCTTGCTATGATGCCT
 
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JMFN004E13-           CACCCTGAGCGCTGCTTCTTGATGTGGCAGTTCCCATGGTATCCAAAGCACTGGGATGTT
rJMSF047K18+          CNCCCTGAGCGCTGCTTCTTGATGNGGCAGTTCCCNTGGTATCCAAAGCNCTGGGATGTT
                      ____________________________________________________________
consensus             CACCCTGAGCGCTGCTTCTTGATGTGGCAGTTCCCATGGTATCCAAAGCACTGGGATGTT
 
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JMFN004E13-           GATAAGAAAGGGCCCAGTCCTTGGTTGCGTATGTTCCAAAATGCCAGAGAATGGTGCTCA
rJMSF047K18+          GNTAAGAAAGGGCCCNGTCCTTGGTTGCGTATGTTCCNAAANGCCNGAGAATGGNGCTCA
                      ____________________________________________________________
consensus             GATAAGAAAGGGCCCAGTCCTTGGTTGCGTATGTTCCAAAATGCCAGAGAATGGTGCTCA
 
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JMFN004E13-           TGAGATCTTTGGTGG-CTAAAGAGGCATATTTTTTCTTTTTTTTTTTCCTGTTCCGAAAC
rJMSF047K18+          NGNGATCTTTGGTGGNCTAAAGAGGCATATTTTTTNTTTTTTTTTTTCCTGTTCCGAAAC
                      ____________________________________________________________
consensus             TGAGATCTTTGGTGGNCTAAAGAGGCATATTTTTTCTTTTTTTTTTTCCTGTTCCGAAAC
 
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JMFN004E13-           GCTTAACAAATCAAATCAAAAGAGCGAAGGAAG                           
rJMSF047K18+          GCTTAACAAATCAAATCAAAAGAGCGAAGGAAGAGCACAGTTCTAAAGTATGAGATGGAA
                      ____________________________________________________________
consensus             GCTTAACAAATCAAATCAAAAGAGCGAAGGAAGAGCACAGTTCTAAAGTATGAGATGGAA
 
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rJMSF047K18+          GAAGTTATGTTGCTTAGTTTTCCCTTTTCGATGTAAATCACATAAATTNTGAATAGAAGT
                      ____________________________________________________________
consensus             GAAGTTATGTTGCTTAGTTTTCCCTTTTCGATGTAAATCACATAAATTNTGAATAGAAGT