Contig 004395:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF047K07Sequence686004395 (2)ref|XP_008218699.1|76.3PREDICTED: uncharacterized protein LOC103318996 [Prunus mume]729004395 (2)ref|XP_006349311.1|8e-19PREDICTED: uncharacterized protein LOC102585942 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF047K07- GGAAAAAAAATAATAATAATTGAGGGAGAGGGAGAATAGAAATGAG
                      ____________________________________________________________
consensus GGAAAAAAAATAATAATAATTGAGGGAGAGGGAGAATAGAAATGAG
 
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JMSF047K07- AGAGATCTTTCTTGAGGGGAAATCCTTGCGGTTTCTTCTGTTGCTCTGTTCAATTTCGTC
                      ____________________________________________________________
consensus AGAGATCTTTCTTGAGGGGAAATCCTTGCGGTTTCTTCTGTTGCTCTGTTCAATTTCGTC
 
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JMSF047K07- GCAATTCATTTCAGGCTTTTCAGGCGATCCATCAGGTCCCAAAAATGAGAAAAAGGCCGA
                      ____________________________________________________________
consensus GCAATTCATTTCAGGCTTTTCAGGCGATCCATCAGGTCCCAAAAATGAGAAAAAGGCCGA
 
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JMSF047K07- TGATCACGCCTCTTCCAGCAGCACAGGTTCTAGAACACTCATAATATGCATCGGGCTTAT
                      ____________________________________________________________
consensus TGATCACGCCTCTTCCAGCAGCACAGGTTCTAGAACACTCATAATATGCATCGGGCTTAT
 
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JMSF047K07- AGCGTTTGCAGGGTTATCGTTTTTCCTTTTCAAAATTTGGCAAAGGAAAAGGCGTGAAGA
rJMSF047K07+ TTTTTCCTTTTCAAAATTTGGCAAAGGAAAAGGCGTGAAGA
                      ____________________________________________________________
consensus AGCGTTTGCAGGGTTATCGTTTTTCCTTTTCAAAATTTGGCAAAGGAAAAGGCGTGAAGA
 
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JMSF047K07- GCAATATGCTCGTCTGCTAAAGTTGTTTGAAGAGGATGATGAGCTCGAAGTCGAACTTGG
rJMSF047K07+ GCAATATGCTCGTCTGCTAAAGTTGTTTGAAGAGGATGATGAGCTCGAAGTCGAACTTGG
                      ____________________________________________________________
consensus GCAATATGCTCGTCTGCTAAAGTTGTTTGAAGAGGATGATGAGCTCGAAGTCGAACTTGG
 
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JMSF047K07- CCTTCGGGATTGAATCCATTCCACGTGTTTTATTCAATGTATCATGATGAAAGTAGCAGG
rJMSF047K07+ CCTTCGGGATTGAATCCATTCCACGTGTTTTATTCAATGTATCATGATGAAAGTAGCAGG
                      ____________________________________________________________
consensus CCTTCGGGATTGAATCCATTCCACGTGTTTTATTCAATGTATCATGATGAAAGTAGCAGG
 
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JMSF047K07- TCACGTTGGGAAATATGCACTCCGATGACCACAGGCAGGTTAGGGCTATTATTGCCCGAG
rJMSF047K07+ TCACGTTGGGAAATATGCACTCCGATGACCACAGGCAGGTTAGGGCTATTATTGCCCGAG
                      ____________________________________________________________
consensus TCACGTTGGGAAATATGCACTCCGATGACCACAGGCAGGTTAGGGCTATTATTGCCCGAG
 
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JMSF047K07- GCTTTGAGGCCATGTGAGACATTTTCATTTCCCAAGTATAGCATATTATTAGCGTCACGA
rJMSF047K07+ GCTTTGAGGCCATGTGAGACATTTTCATTTCCCAAGTATAGCATATTATTAGCGTCACGA
                      ____________________________________________________________
consensus GCTTTGAGGCCATGTGAGACATTTTCATTTCCCAAGTATAGCATATTATTAGCGTCACGA
 
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JMSF047K07- TATCTCAAAACGGAGGACTTGGTCTGTGAAAGTCGTTAACTAGTGGCAGAAGGAGTGTTC
rJMSF047K07+ TATCTCAAAACGGAGGACTTGGTCTGTGAAAGTCGTTAACTAGTGGCAGAAGGAGTGTTC
                      ____________________________________________________________
consensus TATCTCAAAACGGAGGACTTGGTCTGTGAAAGTCGTTAACTAGTGGCAGAAGGAGTGTTC
 
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JMSF047K07- GTTCATGCCAGACAGCCAAAGTTTTCACTATCTCGTTTCATTGTTCATTTGTATGTTTCC
rJMSF047K07+ GTTCATGCCAGACAGCCAAAGTTTTCACTATCTCGTTTCATTGTTCATTTGTATGTTTCC
                      ____________________________________________________________
consensus GTTCATGCCAGACAGCCAAAGTTTTCACTATCTCGTTTCATTGTTCATTTGTATGTTTCC
 
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JMSF047K07- TCTGTAGTGTTTGCCATTTTATTTTTTATTTTTTATTTCT
rJMSF047K07+ TCTGTAGTGTTTGCCATTTTATTTTTTATTTTTTATTTCTCTCTTGTGAACTAGGTTTCT
                      ____________________________________________________________
consensus TCTGTAGTGTTTGCCATTTTATTTTTTATTTTTTATTTCTCTCTTGTGAACTAGGTTTCT
 
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rJMSF047K07+ GAAAGTTTATCAGTTGATCTTAGGAAATGACAGACATTTCTTACTGATCTCGTTTGTGCT
                      ____________________________________________________________
consensus GAAAGTTTATCAGTTGATCTTAGGAAATGACAGACATTTCTTACTGATCTCGTTTGTGCT
 
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rJMSF047K07+ TACAGAATTTCCAACCTTGTTTCAAGTGCACATTTATGATAATGGTGTAACTGTAAAGAT
                      ____________________________________________________________
consensus TACAGAATTTCCAACCTTGTTTCAAGTGCACATTTATGATAATGGTGTAACTGTAAAGAT