Contig 004392:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF033G16+                                                 ATAAGAAGCTCGTGCAGAAAC
rJMSF047D03+                                                             TGCAGAAAC
                      ____________________________________________________________
consensus                                                    ATAAGAAGCTCGTGCAGAAAC
 
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rJMSF033G16+          CCCGATGGTTATTCTTTTCTCATGAGCGCTCTAAGGTCAGGAACAATCGAAACGAGGAGC
rJMSF047D03+          CCCGATGGTTATTCTTTTCTCATGAGCGCTTTAAGGTCAGGAACAATCGAAACGAGGAGC
                      ____________________________________________________________
consensus             CCCGATGGTTATTCTTTTCTCATGAGCGCTTTAAGGTCAGGAACAATCGAAACGAGGAGC
 
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rJMSF033G16+          AATGCAGCTGCTACACTTTTCACACTATCAGCTGTCGACTCGAATAAAGCACTCATTGGG
rJMSF047D03+          AATGCAGCTGCTACAC-TTTCACACTATCAGCTGTCGACTCGAATAAAGCACTCATTGGG
                      ____________________________________________________________
consensus             AATGCAGCTGCTACACTTTTCACACTATCAGCTGTCGACTCGAATAAAGCACTCATTGGG
 
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rJMSF033G16+          AAATCTGGTGCCATGAAACCGCTCATTGACCTCTTGGAAGAAGGGCATCCTTTGGCAATG
rJMSF047D03+          AAATCTGGTGCCATGAAACCGCTCATTGACCTCTTGGAAGAAGGGCATCCTTTGGCAATG
                      ____________________________________________________________
consensus             AAATCTGGTGCCATGAAACCGCTCATTGACCTCTTGGAAGAAGGGCATCCTTTGGCAATG
 
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rJMSF033G16+          AAAGATGCTGCTTCAGCGATTTTTAACCTATGTATTCTCCATGAAAATAAGGCAAGAGCT
rJMSF047D03+          AAAGATGCTGCTTCAGCGATTTTTAACCTATGTATTCTCCATGAAAATAAGGCAAGAGCT
                      ____________________________________________________________
consensus             AAAGATGCTGCTTCAGCGATTTTTAACCTATGTATTCTCCATGAAAATAAGGCAAGAGCT
 
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rJMSF033G16+          GTTAGAGATGGTGCAGTGGGTGTTCTCCTGAAAAAGATCATCGATAAAGTCCATGTGGAT
rJMSF047D03+          GTTAGAGATGGTGCAGTGGGTGTTCTCCTGAAAAAGATCATCGATAAAGTCCATGTGGAT
                      ____________________________________________________________
consensus             GTTAGAGATGGTGCAGTGGGTGTTCTCCTGAAAAAGATCATCGATAAAGTCCATGTGGAT
 
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rJMSF033G16+          GAACTCTTGGCCATCCTTGCAATGCTTTCTACCAATCAGAGGGCAGTTGAGGAAATGGGG
rJMSF047D03+          GAACTCTTGGCCATCCTTGCAATGCTTTCTACCAATCAGAGGGCAGTTGAGGAAATGGGG
                      ____________________________________________________________
consensus             GAACTCTTGGCCATCCTTGCAATGCTTTCTACCAATCAGAGGGCAGTTGAGGAAATGGGG
 
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rJMSF033G16+          GAGCTCGGGGCAGTTCCATGTTTGCTTAATTTAATAAGGGAGACCTCTTGTGCTCGCAAC
rJMSF047D03+          GAGCTCGGGGCAGTTCCATGTTTGCTTAATTTAATAAGGGAGACCTCTTGTGCTCGCAAC
                      ____________________________________________________________
consensus             GAGCTCGGGGCAGTTCCATGTTTGCTTAATTTAATAAGGGAGACCTCTTGTGCTCGCAAC
 
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rJMSF033G16+          AAGGAGAATTGCATCGCTGTCCTGTACACAATCTGTTTCAGTGACCGGACCAAGTGGAAG
rJMSF047D03+          AAGGAGAATTGCATCGCTGTCCTGTACACAATCTGTTTCAGTGACCGGACCAAGTGGAAG
                      ____________________________________________________________
consensus             AAGGAGAATTGCATCGCTGTCCTGTACACAATCTGTTTCAGTGACCGGACCAAGTGGAAG
 
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rJMSF033G16+          GAAATCAGGGAAGATGAGAACATGCATCGCACTATCTCTCAACTCGCTCGAAATGGCACT
rJMSF047D03+          GAAATCAGGGAAGATGAGAACATGCATCGCACTATCTCTCAACTCGCTCGAAATGGCACT
                      ____________________________________________________________
consensus             GAAATCAGGGAAGATGAGAACATGCATCGCACTATCTCTCAACTCGCTCGAAATGGCACT
 
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rJMSF033G16+          TCAAGAGCCAAGAGGAAGGCAAGCGGCATTCTTGACAGACTCAACAGGGGTATCAACCTT
rJMSF047D03+          TCAAGAGCCAAGAGGAAGGCAAGCGGCATTCTTGACAGACTCAACAGGGGTATCAACCTT
                      ____________________________________________________________
consensus             TCAAGAGCCAAGAGGAAGGCAAGCGGCATTCTTGACAGACTCAACAGGGGTATCAACCTT
 
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rJMSF033G16+          ACCCACACCGCATGACAAAGCCATCAGGAGCAGAATCTCTGTAAATTCTACACCTTTTTA
rJMSF047D03+          ACCCACACCGCATGACAAAGCCATCAGGAGCAGAATCTCTGTAAATTCTACACCTTTTTA
                      ____________________________________________________________
consensus             ACCCACACCGCATGACAAAGCCATCAGGAGCAGAATCTCTGTAAATTCTACACCTTTTTA
 
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rJMSF033G16+          AACTCCACGTAATATCTATATATCGAGGCATATTGTGTGGTCGCTTGCGACCTTCATTCT
rJMSF047D03+          AACTCCACGTAATATCTATATATCGAGGCATATTGTGTGGTCGCTTGCGACCTTCATTCT
                      ____________________________________________________________
consensus             AACTCCACGTAATATCTATATATCGAGGCATATTGTGTGGTCGCTTGCGACCTTCATTCT
 
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rJMSF033G16+          GTACATTCTATCTCGAGTTTACCATGCTACATTGTCCCTATGTCTAGTTAATCAAGAAGT
rJMSF047D03+          GTACATTCTATCTCGAGTTTACCATGCTACATTGTCCCTATGTCTAGTTAATCAAGAAGT
                      ____________________________________________________________
consensus             GTACATTCTATCTCGAGTTTACCATGCTACATTGTCCCTATGTCTAGTTAATCAAGAAGT