Contig 004391:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF027P01Sequence469004391 (2)ref|XP_009762157.1|96.3PREDICTED: uncharacterized protein LOC104214213 [Nicotiana sylvestris] ref|XP_00
JMSF046N17Sequence691014759emb|CDP05971.1|2e-45unnamed protein product [Coffea canephora]703004391 (2)emb|CDP05971.1|3e-60unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF046N17+                          TGTGAGAGTTCTGCCAGATGATGGNGTAGCAATGCTAGAGATTC
                      ____________________________________________________________
consensus                             TGTGAGAGTTCTGCCAGATGATGGNGTAGCAATGCTAGAGATTC
 
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rJMSF046N17+          CTGGCTACGGTGAAGTAGGGGATTCTGATGATCAGCACAGAGATATGCGTATGGACATAG
                      ____________________________________________________________
consensus             CTGGCTACGGTGAAGTAGGGGATTCTGATGATCAGCACAGAGATATGCGTATGGACATAG
 
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rJMSF046N17+          ATCACATGTCTTACGAGGAGCTTCTTGCATTGGGTGATCAGATTGGCAGTGTCACTACTG
                      ____________________________________________________________
consensus             ATCACATGTCTTACGAGGAGCTTCTTGCATTGGGTGATCAGATTGGCAGTGTCACTACTG
 
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rJMSF046N17+          GTTTTTCAGAAGATGCCATTATTAATCATTTGAAAACAAGATTATTCACCTTCCCAACAA
                      ____________________________________________________________
consensus             GTTTTTCAGAAGATGCCATTATTAATCATTTGAAAACAAGATTATTCACCTTCCCAACAA
 
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rJMSF027P01+                 TAGTTCAGAAGGTGCTGAATGTCTGGATCAAGAAACNGATTTCTGTGTCATAT
rJMSF046N17+          CTTCTTCTAGTTCAGAAGGTGCTGAATGTCTGGATCAAGAAACTGATTTCTGTGTCATAT
                      ____________________________________________________________
consensus             CTTCTTCTAGTTCAGAAGGTGCTGAATGTCTGGATCAAGAAACTGATTTCTGTGTCATAT
 
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rJMSF027P01+          GCCAGAANGGCTNCGAGGACCAAGAAAACATTGGNAGNCTTGAGTGTGGGCATGAGTATC
rJMSF046N17+          GCCAGAATGGCTACGAGGACCAAGAAAACATTGGAAGACTTGAGTGTGGGCATGAGTATC
                      ____________________________________________________________
consensus             GCCAGAATGGCTACGAGGACCAAGAAAACATTGGAAGACTTGAGTGTGGGCATGAGTATC
 
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rJMSF027P01+          ACNTAGATNGCATAAAGAAGTGGNCGATTGTGAAGANCAGTTGTCCAATCTGCAAATCCG
rJMSF046N17+          ACTTAGATTGCATAAAGAAGTGGCTGATTGTGAAGAACAGTTGTCCAATCTGCAAATCCG
                      ____________________________________________________________
consensus             ACTTAGATTGCATAAAGAAGTGGCTGATTGTGAAGAACAGTTGTCCAATCTGCAAATCCG
 
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rJMSF027P01+          CGGCNTNGTCAACATAACAAAAGGGTTCATAAAAATGGTTGGCAGAACGCCTTGGGGAAG
rJMSF046N17+          CGGCATTGTCAACATAACAAAAGGGTTCATAAAAATGGTTGGCAGAACGCCTTGGGGAAG
                      ____________________________________________________________
consensus             CGGCATTGTCAACATAACAAAAGGGTTCATAAAAATGGTTGGCAGAACGCCTTGGGGAAG
 
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rJMSF027P01+          AAGCCTAATCNTTCGTTCTTTTATATCTAAGAAGTATTTATTGTCCAATGAGAGGGGATG
rJMSF046N17+          AAGCCTAATCTTTCGTTCTTTTATATCTAAGAAGTATTTATTGTCCAATGAGAGGGGATG
                      ____________________________________________________________
consensus             AAGCCTAATCTTTCGTTCTTTTATATCTAAGAAGTATTTATTGTCCAATGAGAGGGGATG
 
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rJMSF027P01+          GATTCTTGAACTGTATTNTATCCNGTACATAATTCTCCCCGTCCAANTCTAGCTGCCAAA
rJMSF046N17+          GATTCTTGAACTGTATTATATCCTGTACATAATTCTCCCCGTCCAAATCTAGCTGCCAAA
                      ____________________________________________________________
consensus             GATTCTTGAACTGTATTATATCCTGTACATAATTCTCCCCGTCCAAATCTAGCTGCCAAA
 
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rJMSF027P01+          ATCTGCAGCAAAATGTTTATTCTGTTGGGCTTATATCCGTGNTCTGGAAATTGTACAGAC
rJMSF046N17+          A-CTGCAGCAAAATGTTTATTCTGTTGGGCTTATATCCGTGATCTGGAAATTGTACAGAC
                      ____________________________________________________________
consensus             ATCTGCAGCAAAATGTTTATTCTGTTGGGCTTATATCCGTGATCTGGAAATTGTACAGAC
 
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rJMSF027P01+          AACAGAACTCTAAATCTTGTTCCAGA                                  
rJMSF046N17+          AACAGAACTCTAAATCTTGTTCCAGACATGCATAATAGCTGTATCAAAGTCCCTGTTGAT
                      ____________________________________________________________
consensus             AACAGAACTCTAAATCTTGTTCCAGACATGCATAATAGCTGTATCAAAGTCCCTGTTGAT