Contig 004387:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001M06Sequence418000610 (8)ref|XP_009775565.1|4e-63PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun664004387 (7)ref|XP_008462759.1|3e-74PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun
JMSF004K05Sequence391000610 (8)ref|XP_009775565.1|3e-57PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun481004387 (7)ref|XP_009775565.1|9e-35PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun
JMSF007G06Sequence392000610 (8)ref|XP_009775565.1|8e-52PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun757004387 (7)ref|XP_011048330.1|6e-95PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun
JMSF029C19Sequence702000610 (8)ref|XP_009775565.1|1e-118PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun775004387 (7)ref|XP_008462759.1|1e-99PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun
JMSF032K05Sequence603000610 (8)ref|XP_009775565.1|1e-85PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun650004387 (7)ref|XP_008462759.1|3e-70PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun
JMSF037J14Sequence639000610 (8)ref|XP_009775565.1|1e-103PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun725004387 (7)ref|XP_008462759.1|3e-78PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun
JMSF045N15Sequence758000610 (8)ref|XP_009775565.1|1e-120PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun751004387 (7)ref|XP_008462759.1|1e-83PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subun

Alignment

This contig is upended


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rJMSF029C19+                   ATCAAACCACTGCCATGGCAAATCGCACTGTTATTGTTGACAATAACACCT
                      ____________________________________________________________
consensus                      ATCAAACCACTGCCATGGCAAATCGCACTGTTATTGTTGACAATAACACCT
 
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rJMSF029C19+          GGAACAACACACACATTGCTACTGTGGGAACAGCCATGTCATCACCTGAAAAGGCAGCAT
rJMSF007G06+                ACACACACATTGCTACTGTGGGAACAGCCATGTCATCACCTGAAAAGGCAGCAT
                      ____________________________________________________________
consensus             GGAACAACACACACATTGCTACTGTGGGAACAGCCATGTCATCACCTGAAAAGGCAGCAT
 
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rJMSF032K05+                       GTCTTTGGATGTCAAATATGTTCTTGTTGTATTTGGAGGCCTTGTTG
rJMSF029C19+          GGGATATATTCCAGTCTTTGGATGTCAAATATGTTCTTGTTGTATTTGGAGGCCTTGTTG
rJMSF007G06+          GGGATATATTCCAGTCTTTGGATGTCAAATATATTCTTGTTGTATTTGGAGGCCTTGTTG
rJMSF037J14+                  TTCCAGTCTTTGGATGTCAAATATGTTCTTGTTGTATTNGGAGGCCTTGTTG
rJMSF001M06+                                                   GTATTTGGAGGCCTTGTTG
rJMSF045N15+                  TTCCAGTCTTTGGATGTCAAATATGTTCTTGNTGTATTTGGAGGCCTTGTTG
                      ____________________________________________________________
consensus             GGGATATATTCCAGTCTTTGGATGTCAAATATGTTCTTGTTGTATTTGGAGGCCTTGTTG
 
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rJMSF032K05+          GGTACCCCAGTGATGATATCAACAAGTTCCTATGGATGGTTCGAATTGGAGGAGGGGTAT
rJMSF029C19+          GGTACCCCAGTGATGATATCAACAAGTTCCTATGGATGGTTCGAATTGGAGGAGGGGTAT
rJMSF007G06+          GGTACCCCAGTGATGATATCAACAAGTTCCTATGGATGGTTCGAATTGGAGGAGGGGTAT
rJMSF037J14+          GGTACCCCAGTGATGATATCAACAAGTTCCTATGGATGGTTCGAATTGGAGGAGGGGTAT
rJMSF001M06+          GGTACCCCAGTGATGATATCAACAAGTTCCTATGGATGGTTCGAATTGGAGGAGGGGTAT
rJMSF045N15+          GGTACCCCAGTGATGATATCAACAAGTTCCTATGGATGGTTCGAATTGGAGGAGGGGTAT
                      ____________________________________________________________
consensus             GGTACCCCAGTGATGATATCAACAAGTTCCTATGGATGGTTCGAATTGGAGGAGGGGTAT
 
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rJMSF032K05+          TTCCTCACATCAAGGAACCTGATTATCTGAGGGATGGTCAGTACCGCATTGATTCTCAAG
rJMSF029C19+          TTCCTCACATCAAGGAACCTGATTATCTGAGGGATGGTCAGTACCGCATTGATTCTCAAG
rJMSF007G06+          TTCCTCACATCAAGGAACCTGATTATCTGAGGGATGGTCAGTACCGCATTGATTCTCAAG
rJMSF037J14+          TTCCTCACATCAAGGAACCTGATTATCTGAGGGATGGTCAGTACCGCATTGATTCTCAAG
rJMSF001M06+          TTCCTCACATCAAGGAACCTGATTATCTGAGGGATGGTCAGTACCGCATTGATTCTCAAG
rJMSF045N15+          TTCCTCACATCAAGGAACCTGATTATCTGAGGGATGGTCAGTACCGCATTGATTCTCAAG
                      ____________________________________________________________
consensus             TTCCTCACATCAAGGAACCTGATTATCTGAGGGATGGTCAGTACCGCATTGATTCTCAAG
 
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rJMSF032K05+          CCACTCCAACTATGCTAAACTCTCTCATGTACAAGCTGTCATATTACAGATTTGTGGAGA
rJMSF029C19+          CCACTCCAACTATGCTAAACTCTCTCATGTACAAGCTGTCATATTACAGATTTGTGGAGA
rJMSF004K05+                             CTCTCTCATGTACAAGCTGTCATATTACAGATTTGTGGAGA
rJMSF007G06+          CCACTCCAACTATGCTAAACTCTCTCATGTACAAGCTGTCATATTACAGATTTGTGGAGA
rJMSF037J14+          CCACTCCAACTATGCTAAACTCTCTCATGTACAAGCTGTCATATTACAGATTTGTGGAGA
rJMSF001M06+          CCACTCCAACTATGCTAAACTCTCTCATGTACAAGCTGTCATATTACAGATTTGTGGAGA
rJMSF045N15+          CCACTCCAACTATGCTAAACTCTCTCATGTACAAGCTGTCATATTACAGATTTGTGGAGA
                      ____________________________________________________________
consensus             CCACTCCAACTATGCTAAACTCTCTCATGTACAAGCTGTCATATTACAGATTTGTGGAGA
 
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rJMSF032K05+          CAGATGGCGGCAAGGGTTTTGATAGAGTTAGGCGGACTGAAATTGGAAAGAAAGTTTTTA
rJMSF029C19+          CAGATGGCGGCAAGGGTTTTGATAGAGTTAGGCGGACTGAAATTGGAAAGAAAGTTTTTA
rJMSF004K05+          CAGATGGCGGCAAGGGTTTTGATAGAGTTAGGCGGACTGAAATTGGAAAGAAAGTTTTTA
rJMSF007G06+          CAGATGGCGGCAAGGGTTTTGATAGAGTTAGGCGGACTGAAATTGGAAAGAAAGTTTTTA
rJMSF037J14+          CAGATGGCGGCAAGGGTTTTGATAGAGTTAGGCGGACTGAAATTGGAAAGAAAGTTTTTA
rJMSF001M06+          CAGATGGCGGCAAGGGTTTTGATAGAGTTAGGCGGACTGAAATTGGAAAGAAAGTTTTTA
rJMSF045N15+          CAGATGGCGGCAAGGGTTTTGATAGAGTTAGGCGGACTGAAATTGGAAAGAAAGTTTTTA
                      ____________________________________________________________
consensus             CAGATGGCGGCAAGGGTTTTGATAGAGTTAGGCGGACTGAAATTGGAAAGAAAGTTTTTA
 
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rJMSF032K05+          AGCTCACTCACTTTGAGGAGGTATTCACCACACACCATTGGATGGTCCGGATATACAAAC
rJMSF029C19+          AGCTCACTCACTTTGAGGAGGTATTCACCACACACCATTGGATGGTCCGGATATACAAAC
rJMSF004K05+          AGCTCACTCACTTTGAGGAGGTATTCACCACACACCATTGGATGGTCCGGATATACAAAC
rJMSF007G06+          AGCTCACTCACTTTGAGGAGGTATTCACCACACACCATTGGATGGTCCGGATATACAAAC
rJMSF037J14+          AGCTCACTCACTTTGAGGAGGTATTCACCACACACCATTGGATGGTCCGGATATACAAAC
rJMSF001M06+          AGCTCACTCACTTTGAGGAGGTATTCACCACACACCANTGGATGGTCCGGATATACAAAC
rJMSF045N15+          AGCTCACTCACTTTGAGGAGGTATTCACCACACACCATTGGATGGTCCGGATATACAAAC
                      ____________________________________________________________
consensus             AGCTCACTCACTTTGAGGAGGTATTCACCACACACCATTGGATGGTCCGGATATACAAAC
 
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rJMSF032K05+          TAAAGCCCCCAAAGAACAGGATCCGTGGGAAAACAAAGAAATCTAAGTCGGTGAAGTCTA
rJMSF029C19+          TAAAGCCCCCAAAGAACAGGATCCGTGGGAAAACAAAGAAATCTAAGTCGGTGAAGTCTA
rJMSF004K05+          TAAAGCCCCCAAAGAACAGGATCCGTGGGAAAACAAAGAAATCTAAGTCGGTGAAGTCTA
rJMSF007G06+          TAAAGCCCCCAAAGAACAGGATCCGTGGGAAAACAAAGAAATCTAAGTCGGTGAAGTCTA
rJMSF037J14+          TAAAGCCCCCAAAGAACAGGATCCGTGGGAAAACAAAGAAATCTAAGTCGGTGAAGTCTA
rJMSF001M06+          TAAAGCCCCCAAAGAACAGGATCCGTGGGAAAACAAAGAAATNTAAGTCGGTGAAGTCTA
rJMSF045N15+          TAAAGCCCCCAAAGAACAGGATCCGTGGGAAAACAAAGAAATCTAAGTCGGTGAAGTCTA
                      ____________________________________________________________
consensus             TAAAGCCCCCAAAGAACAGGATCCGTGGGAAAACAAAGAAATCTAAGTCGGTGAAGTCTA
 
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rJMSF032K05+          GCAACTCAAAGAGAAGCGGAACAAGAAAGAAGAATCCATGGCACTAGAGAACATTACGAA
rJMSF029C19+          GCAACTCAAAGAGAAGCGGAACAAGAAAGAAGAATCCATGGCACTAGAGAACATTACGAA
rJMSF004K05+          GCAACTCAAAGAGAAGCGGAACAAGAAAGAAGAATCCATGGCACTAGAGAACATTACGAA
rJMSF007G06+          GCAACTCAAAGAGAAGCGGAACAAGAAAGAAGAATCCATGGCACTAGAGAACATTACGAA
rJMSF037J14+          GCAACTCAAAGAGAAGCGGAACAAGAAAGAAGAATCCATGGCACTAGAGAACATTACGAA
rJMSF001M06+          GCAACTCAAAGAGAAGCGGAACAAGAAAGAAGAATCCATGGCACTAGAGAACATTACGAA
rJMSF045N15+          GCAACTCAAAGAGAAGCGGAACAAGAAAGAAGAATCCATGGCACTAGAGAACATTACGAA
                      ____________________________________________________________
consensus             GCAACTCAAAGAGAAGCGGAACAAGAAAGAAGAATCCATGGCACTAGAGAACATTACGAA
 
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rJMSF032K05+          CTTCTAGTAGAGGATGACTTTTGCAACACATGCTTTGTAGTTTCACATTCGAAGGAATCG
rJMSF029C19+          CTTCTAGTAGAGGATGACTTTTGCAACACATGCTTTGTAGTTTCACATTCGAAGGAATCG
rJMSF004K05+          CTTCTAGTAGAGGATGACTTTTGCAACACATGCTTTGTAGTTTCACATTCGAAGGAATCG
rJMSF007G06+          CTTCTAGTAGAGGATGACTTTTGCAACACATGCTTTGTAGTTTCACATTCGAAGGAATCG
rJMSF037J14+          CTTCTAGTAGAGGATGACTTTTGCAACACATGCTTTGTAGTTTCACATTCGAAGGAATCG
rJMSF001M06+          CTTCTAGTAGAGGATGACTTTTGCAACACATGCTTTGTAGTTTCACATTCGAAGGAATCG
rJMSF045N15+          CTTCTAGTAGAGGATGACTTTTGCAACACATGCTTTGTAGTTTCACATTCGAAGGAATCG
                      ____________________________________________________________
consensus             CTTCTAGTAGAGGATGACTTTTGCAACACATGCTTTGTAGTTTCACATTCGAAGGAATCG
 
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rJMSF032K05+          AGCTTGAGATTATGCGGTGGTCTCAATGTTCTTTCTCTTTTCACTTACCATCCACGTAGA
rJMSF029C19+          AGCTTGAGATTATGCGGTGGTCTCAATGTTCTTTCTCTTTTCACTTACCATCCACGTAGA
rJMSF004K05+          AGCTTGAGATTATGCGGTGGTCTCAATGTTCTTTCTCTTTTCACTTACCATCCACGTAGA
rJMSF007G06+          AGCTTGAGATTATGCGGTGGTCTCAATGTTCTTTCTCTTTTCACTTACCATCCACGTAGA
rJMSF037J14+          AGCTTGAGATTATGCGGTGGTCTCAATGTTCTTTCTCTTTTCACTTACCATCCACGTAGA
rJMSF001M06+          AGCTTGAGATTATGCGGTGGTCTCAATGTTCTTTCTCTTTTCACTTACCATCCACGTAGA
rJMSF045N15+          AGCTTGAGATTATGCGGTGGTCTCAATGTTCTTTCTCTTTTCACTTACCATCCACGTAGA
                      ____________________________________________________________
consensus             AGCTTGAGATTATGCGGTGGTCTCAATGTTCTTTCTCTTTTCACTTACCATCCACGTAGA
 
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rJMSF032K05+          GACTGCTGAAAGGATTGTTTTGATTAGCAATTCAGAGATTTTAGCTGAGTGTACTAAATC
rJMSF029C19+          GACTGCTGAAAGGATTGTTTTGATTAGCAATTCAGAGATTTTAGCTGAGTGTACTAAATC
rJMSF004K05+          GACTGCTGAAAGGATTGTTTTGATTAGCAATTCAGAGATTTTAGCTGAGTGTACTAAATC
rJMSF007G06+          GACTGCTGAAAGGATTGTTTTGATTAGCAATTCAGAGATTTTAGCTGAGTGTACTAAATC
rJMSF037J14+          GACTGCTGAAAGGATTGTTTTGATTAGCAATTCAGAGATTTTAGCTGAGTGTACTAAATC
rJMSF001M06+          GACTGCTGAAAGGACTTGTTTGATTAGCAATTCNGAGATTTTAGCNGAGTGTACTAAATC
rJMSF045N15+          GACTGCTGAAAGGATTGTTTTGATTAGCAATTCAGAGATTTTAGCTGAGTGTACTAAATC
                      ____________________________________________________________
consensus             GACTGCTGAAAGGATTGTTTTGATTAGCAATTCAGAGATTTTAGCTGAGTGTACTAAATC
 
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rJMSF032K05+          GAA                                                         
rJMSF029C19+          GAAT                                                        
rJMSF004K05+          GAATGTATTTATATTGCTCA                                        
rJMSF007G06+          GAATGTATTTATATTGCTCATAGACATAC                               
rJMSF037J14+          GAATGTATTTATATTGCTCATAGACATACCAGTTCAGTCAAAATTTTCTGTG        
rJMSF001M06+          GAATGTATTTATATTGCTCATAGACATA-C                              
rJMSF045N15+          GAATGTATTTATATTGCTCATAGACATA-CAGTTCAGTCAAAATTTTCTGTGCACCTTCA
                      ____________________________________________________________
consensus             GAATGTATTTATATTGCTCATAGACATACCAGTTCAGTCAAAATTTTCTGTGCACCTTCA