Contig 004385:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023N20Sequence639019994729004385 (3)ref|XP_011087650.1|273PREDICTED: uncharacterized protein LOC105169073 [Sesamum indicum]
JMSF036M18Sequence631020054ref|XP_009602184.1|52.8PREDICTED: uncharacterized protein LOC104097327 [Nicotiana tomentosiformis]698004385 (3)ref|XP_011087650.1|269PREDICTED: uncharacterized protein LOC105169073 [Sesamum indicum]
JMSF045I06Sequence759014752793004385 (3)emb|CDO97635.1|3e-95unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF045I06+                                                         TCTGGGTCAAAAT
                      ____________________________________________________________
consensus                                                            TCTGGGTCAAAAT
 
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rJMSF023N20+                                                        TGTAGCTGCTTCGC
rJMSF045I06+          TTAACAAGGATGGTTACAAGCACAGATTACCTGATTATTTTACAAGTGTAGCTGCTTCGC
                      ____________________________________________________________
consensus             TTAACAAGGATGGTTACAAGCACAGATTACCTGATTATTTTACAAGTGTAGCTGCTTCGC
 
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rJMSF023N20+          CTAAGACTAAAGGTGATAATGATGATGGTATTGCCCTTTGTGCTTTCCCCCTACTGAGTA
rJMSF036M18+                      GTGATAATGATGATGGTATTGCCCTTTGTGCTTTCCCCCTACTGAGTA
rJMSF045I06+          CTAAGACTAAAGGTGATAATGATGATGGTATTGCCCTTTGTGCTTTCCCCCTACTGAGTA
                      ____________________________________________________________
consensus             CTAAGACTAAAGGTGATAATGATGATGGTATTGCCCTTTGTGCTTTCCCCCTACTGAGTA
 
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rJMSF023N20+          CCATTTGTATTGGTGTCTTTGCTGTCATTGTAACTTCTTATTTGTCCTGGCTCGGAAGAC
rJMSF036M18+          CCATTTGTATTGGTGTCTTTGCTGTCATTGTAACTTCTTATTTGTCCTGGCTCGGAAGAC
rJMSF045I06+          CCATTTGTATTGGTGTCTTTGCTGTCATTGTAACTTCTTATTTGTCCTGGCTCGGAAGAC
                      ____________________________________________________________
consensus             CCATTTGTATTGGTGTCTTTGCTGTCATTGTAACTTCTTATTTGTCCTGGCTCGGAAGAC
 
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rJMSF023N20+          GAATTGTGCATTTGATCATCAATAAGGGATTGCGAAAGAGAGTGTACACATTAATCATTT
rJMSF036M18+          GAATTGTGCATTTGATCATCAATAAGGGATTGCGAAAGAGAGTGTACACATTAATCATTT
rJMSF045I06+          GAATTGTGCATTTGATCATCAATAAGGGATTGCGAAAGAGAGTGTACACATTAATCATTT
                      ____________________________________________________________
consensus             GAATTGTGCATTTGATCATCAATAAGGGATTGCGAAAGAGAGTGTACACATTAATCATTT
 
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rJMSF023N20+          CTTTTTCTAGTTTCTTCCCATTGAGGTTTGTATTTCTTGGTTTATCTGTTCTATCTGCCC
rJMSF036M18+          CTTTTTCTAGTTTCTTCCCATTGAGGTTTGTATTTCTTGGTTTATCTGTTCTATCTGCCC
rJMSF045I06+          CTTTTTCTAGTTTCTTCCCATTGAGGTTTGTATTTCTTGGTTTATCTGTTCTATCTGCCC
                      ____________________________________________________________
consensus             CTTTTTCTAGTTTCTTCCCATTGAGGTTTGTATTTCTTGGTTTATCTGTTCTATCTGCCC
 
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rJMSF023N20+          CTGGGGAAGTGGTGTTTGAAATTCTTGCTTTCCTGGGTTTTCTTTCGTTTTTGTGTTGTG
rJMSF036M18+          CTGGGGAAGTGGTGTTTGAAATTCTTGCTTTCCTGGGTTTTCTTTCGTTTTTGTGTTGTG
rJMSF045I06+          CTGGGGAAGTGGTGTTTGAAATTCTTGCTTTCCTGGGTTTTCTTTCGTTTTTGTGTTGTG
                      ____________________________________________________________
consensus             CTGGGGAAGTGGTGTTTGAAATTCTTGCTTTCCTGGGTTTTCTTTCGTTTTTGTGTTGTG
 
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rJMSF023N20+          CGGGGGTGGGTATTTGCACACTAGTGTACTTTCCTGTTGCAGATGCTTTAGCATTGAGGA
rJMSF036M18+          CGGGGGTGGGTATTTGCACACTAGTGTACTTTCCTGTTGCAGATGCTTTAGCATTGAGGA
rJMSF045I06+          CGGGGGTGGGTATTTGCACACTAGTGTACTTTCCTGTTGCAGATGCTTTAGCATTGAGGA
                      ____________________________________________________________
consensus             CGGGGGTGGGTATTTGCACACTAGTGTACTTTCCTGTTGCAGATGCTTTAGCATTGAGGA
 
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rJMSF023N20+          ACCTACAAAAAGATACAGAAGCTAGAAGGATAAGTGATGACCGTAATGACAGTGTTTCTC
rJMSF036M18+          ACCTACAAAAAGATACAGAAGCTAGAAGGATAAGTGATGACCGTAATGACAGTGTTTCTC
rJMSF045I06+          ACCTACAAAAAGATACAGAAGCTAGAAGGATAAGTGATGACCGTAATGACAGTGTTTCTC
                      ____________________________________________________________
consensus             ACCTACAAAAAGATACAGAAGCTAGAAGGATAAGTGATGACCGTAATGACAGTGTTTCTC
 
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rJMSF023N20+          TAATCACTAACCTAAGCCATGTTGGAGCTATAGTGAATAGCCCTGGTAGAAACTCAGCTG
rJMSF036M18+          TAATCACTAACCTAAGCCATGTTGGAGCTATAGTGAATAGCCCTGGTAGAAACTCAGCTG
rJMSF045I06+          TAATCACTAACCTAAGCCATGTTGGAGCTATAGTGAATAGCCCTGGTAGAAACTCAGCTG
                      ____________________________________________________________
consensus             TAATCACTAACCTAAGCCATGTTGGAGCTATAGTGAATAGCCCTGGTAGAAACTCAGCTG
 
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rJMSF023N20+          CTTCAACAAGGCCTGGATCAATTTCTTTCCGGACAGTGGAGAAAGATGGAACTTCTGGGA
rJMSF036M18+          CTTCAACAAGGCCTGGATCAATTTCTTTCCGGACAGTGGAGAAAGATGGAACTTCTGGGA
rJMSF045I06+          CTTCAACAAGGCCTGGATCAATTTCTTTCCGGACAGTGGAGAAAGATGGAACTTCTGGGA
                      ____________________________________________________________
consensus             CTTCAACAAGGCCTGGATCAATTTCTTTCCGGACAGTGGAGAAAGATGGAACTTCTGGGA
 
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rJMSF023N20+          CGTATGTGGAGCTGAGCCTTTTCTCTCCCAGTCAGCACTCAACCCCTCCTGACTCGCCCA
rJMSF036M18+          CGTATGTGGAGCTGAGCCTTTTCTCTCCCAGTCAGCACTCAACCCCTCCTGACTCGCCCA
rJMSF045I06+          CGTATGTGGAGCTGAGCCTTTTCTCTCCCAGTCAGCACTCAACCCCTCCTGACTCGCCCA
                      ____________________________________________________________
consensus             CGTATGTGGAGCTGAGCCTTTTCTCTCCCAGTCAGCACTCAACCCCTCCTGACTCGCCCA
 
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rJMSF023N20+          GATTTCTTGGTTGGCCTATGCTCTCACATTCATAAGTTGATGGACCCAACCTTTTAAGGG
rJMSF036M18+          GATTTCTTGGTTGGCCTATGCTCTCACATTCATAAGTTGATGGACCCAACCTTTTAAGGG
rJMSF045I06+          GATTTCTTGGTTGGCCTATGCTCTCACATTCATAAGTTGATGGACCCAACCTTTTAAGGG
                      ____________________________________________________________
consensus             GATTTCTTGGTTGGCCTATGCTCTCACATTCATAAGTTGATGGACCCAACCTTTTAAGGG
 
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rJMSF023N20+          TTGACATGAATACAAGAACAATTTACACATTTTTGTTGGGAAGAAGAAAC          
rJMSF036M18+          TTGACATGAATACAAGAACAATTTACACATTTTTGTTGGGAAGAAGAAAC          
rJMSF045I06+          TTGACATGAATACAAGAACAATTTACACATTTTTGTTGGGAAGAAGAAACTGTTTGTAAA
                      ____________________________________________________________
consensus             TTGACATGAATACAAGAACAATTTACACATTTTTGTTGGGAAGAAGAAACTGTTTGTAAA