Contig 004384:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF017A21+                                AAATGAAATCTGCAAAAATTACTTACCAAACATGACTT
                      ____________________________________________________________
consensus                                   AAATGAAATCTGCAAAAATTACTTACCAAACATGACTT
 
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rJMSF017A21+          TGTCATTCACTAATGTTGGATCATTAAGACATTGATAGGGTTTAAGCTGAAACATGTTGG
                      ____________________________________________________________
consensus             TGTCATTCACTAATGTTGGATCATTAAGACATTGATAGGGTTTAAGCTGAAACATGTTGG
 
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rJMSF017A21+          TAGGAAACCCTCTGGATTTGATTGCCTTGACCTTGAGTATTGTAGTTCAACCTTATCATA
rJMSF045E07+                          TTTGATTGCCTTGACCTTGAGTATTGTAGTTCAACCTTATCATA
                      ____________________________________________________________
consensus             TAGGAAACCCTCTGGATTTGATTGCCTTGACCTTGAGTATTGTAGTTCAACCTTATCATA
 
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rJMSF017A21+          TACTGATGATCA-CAAGTCCTATACATATAGTACTGACTGAACACCAGAAATTTTTTTAG
rJMSF045E07+          TACTGATGATCACCAAGTCCTATACATATAGTACTGACTGAACACCAGAAATTTTTTTAG
                      ____________________________________________________________
consensus             TACTGATGATCACCAAGTCCTATACATATAGTACTGACTGAACACCAGAAATTTTTTTAG
 
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rJMSF017A21+          AGAATATAGCTTCCCTTCCTTGAACACATTCTTGTATTTGTCTACATCCGAGTTTTGCAT
rJMSF045E07+          AGAATATAGCTTCCCTTCCTTGAACACATTCTTGTATTTGTCTACATCCGAGTTTTGCAT
                      ____________________________________________________________
consensus             AGAATATAGCTTCCCTTCCTTGAACACATTCTTGTATTTGTCTACATCCGAGTTTTGCAT
 
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rJMSF017A21+          GTTTACATGAATAAATGTTCCCTGTATTTCATGATAGAATAGTGAACAGATTTTTTAGTG
rJMSF045E07+          GTTTACATGAATAAATGTTCCCTGTATTTCATGATAGAATAGTGAACAGATTTTTTAGTG
                      ____________________________________________________________
consensus             GTTTACATGAATAAATGTTCCCTGTATTTCATGATAGAATAGTGAACAGATTTTTTAGTG
 
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rJMSF017A21+          TGAAAACAAAGAAAGGAAAATGTAACAGTGTGTACGAAATAGTGCTTACCTCTTCATCGC
rJMSF045E07+          TGAAAACAAAGAAAGGAAAATGTAACAGTGTGTACGAAATAGTGCTTACCTCTTCATCGC
                      ____________________________________________________________
consensus             TGAAAACAAAGAAAGGAAAATGTAACAGTGTGTACGAAATAGTGCTTACCTCTTCATCGC
 
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rJMSF017A21+          ATACCACAACCTCTCTACTCTTCATTTGTTTCGAACCTCTCCTTTCAGGTATTTCATAAA
rJMSF045E07+          ATACCACAACCTCTCTACTCTTCATTTGTTTCGAACCTCTCCTTTCAGGTATTTCATAAA
                      ____________________________________________________________
consensus             ATACCACAACCTCTCTACTCTTCATTTGTTTCGAACCTCTCCTTTCAGGTATTTCATAAA
 
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rJMSF017A21+          CTCTAACACACCTAATTCGAATGGCCCTCTCTCTATTTAGAGGGACAACATCTTTAACCA
rJMSF045E07+          CTCTAACACACCTAATTCGAATGGCCCTCTCTCTATTTAGAGGGACAACATCTTTAACCA
                      ____________________________________________________________
consensus             CTCTAACACACCTAATTCGAATGGCCCTCTCTCTATTTAGAGGGACAACATCTTTAACCA
 
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rJMSF017A21+          AAATATATTGACTTGGCATCTTAAAATATGCAGGGGTTTACAAATTGGTTTACTGCTTAA
rJMSF045E07+          AAATATATTGACTTGGCATCTTAAAATATGCAGGGGTTTACAAATTGGTTTACTGCTTAA
                      ____________________________________________________________
consensus             AAATATATTGACTTGGCATCTTAAAATATGCAGGGGTTTACAAATTGGTTTACTGCTTAA
 
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rJMSF017A21+          GGTTGATTTGGAACAATGGTGGCTGAAAAAAGTTTGAGACTGAGGTTTATATAGGCTCAA
rJMSF045E07+          GGTTGATTTGGAACAATGGTGGCTGAAAAAAGTTTGAGACTGAGGTTTATATAGGCTCAA
                      ____________________________________________________________
consensus             GGTTGATTTGGAACAATGGTGGCTGAAAAAAGTTTGAGACTGAGGTTTATATAGGCTCAA
 
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rJMSF017A21+          GAAGTGGAATTCAAAAGTTGAACCTACCATTATTTGCAGCCGGAATAGTGATGGAGACCT
rJMSF045E07+          GAAGTGGAATTCAAAAGTTGAACCTACCATTATTTGCAGCCGGAATAGTGATGGAGACCT
                      ____________________________________________________________
consensus             GAAGTGGAATTCAAAAGTTGAACCTACCATTATTTGCAGCCGGAATAGTGATGGAGACCT
 
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rJMSF017A21+          TTGAGTTTCCAAGAAATAAATCTTAATAATCATGCAGATTTTTTGGAAGCATTTATTTCA
rJMSF045E07+          TTGAGTTTCCAAGAAATAAATCTTAATAATCATGCAGATTTTTTGGAAGCATTTATTTCA
                      ____________________________________________________________
consensus             TTGAGTTTCCAAGAAATAAATCTTAATAATCATGCAGATTTTTTGGAAGCATTTATTTCA
 
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rJMSF017A21+          AATACATTTTTAAATCTGTATGTG                                    
rJMSF045E07+          AATACATTTTTAAATCTGTATGTGTGTATCGGAAGGTCTTTACGTGTATATATGTAAATC
                      ____________________________________________________________
consensus             AATACATTTTTAAATCTGTATGTGTGTATCGGAAGGTCTTTACGTGTATATATGTAAATC
 
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rJMSF045E07+          GATTCAAGCAATCTTGGAAATAGATTTTATATAGGTTATGATTAGAAGTCTTACATAATT
                      ____________________________________________________________
consensus             GATTCAAGCAATCTTGGAAATAGATTTTATATAGGTTATGATTAGAAGTCTTACATAATT
 
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rJMSF045E07+          AGAAGTCTATTGAATATCCTTGGTAGCATAACATATTAGCTGTATAATGTCCTGAAAGCC
                      ____________________________________________________________
consensus             AGAAGTCTATTGAATATCCTTGGTAGCATAACATATTAGCTGTATAATGTCCTGAAAGCC