Contig 004382:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF011E24+                                                              TCTTTGGG
                      ____________________________________________________________
consensus                                                                 TCTTTGGG
 
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rJMSF011E24+          TNCAAGGGATGAGCATTTATTGAGGAAGCTTTCCCATCTCAAATATTTGAGATGTCTGGT
rJMSF045D02+               GGGATGAGCATTTATTGAGGAAGCTTTCCCATCTCAAATATTTGAGATGTCTGGT
                      ____________________________________________________________
consensus             TNCAAGGGATGAGCATTTATTGAGGAAGCTTTCCCATCTCAAATATTTGAGATGTCTGGT
 
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rJMSF011E24+          CTCGCCATCATGTTCATTTGCTGAAATTGACATTCTCGATCATCTTGAATCTCTTTCGTT
rJMSF045D02+          CTCGCCATCATGTTCATTTGCTGAAATTGACATTCTCGATCATCTTGAATCTCTTTCGTT
                      ____________________________________________________________
consensus             CTCGCCATCATGTTCATTTGCTGAAATTGACATTCTCGATCATCTTGAATCTCTTTCGTT
 
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rJMSF011E24+          ATACAATAGTTGGAATAGGGATTCACATGACTGTGGGAATCCACATCTTCTTAATGATCT
rJMSF045D02+          ATACAATAGTTGGAATAGGGATTCACATGACTGTGGGAATCCACATCTTCTTAATGATCT
                      ____________________________________________________________
consensus             ATACAATAGTTGGAATAGGGATTCACATGACTGTGGGAATCCACATCTTCTTAATGATCT
 
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rJMSF011E24+          TAAACTCAGCAAGTTTCCATCAAGTATTAAGGAAATAAATTTCGAGGGTATTACACTTTC
rJMSF045D02+          TAAACTCAGCAAGTTTCCATCAAGTATTAAGGAAATAAATTTCGAGGGTATTACACTTTC
                      ____________________________________________________________
consensus             TAAACTCAGCAAGTTTCCATCAAGTATTAAGGAAATAAATTTCGAGGGTATTACACTTTC
 
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rJMSF011E24+          GTCGTCAGCAATTTCAATAATTGCACAACTCTCCAATCTTGAGGCTCTAATACTAACGTG
rJMSF045D02+          GTCGTCAGCAATTTCAATAATTGCACAACTCTCCAATCTTGAGGCTCTAATACTAACGTG
                      ____________________________________________________________
consensus             GTCGTCAGCAATTTCAATAATTGCACAACTCTCCAATCTTGAGGCTCTAATACTAACGTG
 
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rJMSF011E24+          TTCCAAGTTTGAGGGTTTAGAATGGAATGTGGATGAGGAAACCCGATTCCCCAAACTAAA
rJMSF045D02+          TTCCAAGTTTGAGGGTTTAGAATGGAATGTGGATGAGGAAACCCGATTCCCCAAACTAAA
                      ____________________________________________________________
consensus             TTCCAAGTTTGAGGGTTTAGAATGGAATGTGGATGAGGAAACCCGATTCCCCAAACTAAA
 
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rJMSF011E24+          ATACCTCCAACTATTTCATCTTGATATTGGAATTTGGAATATTTGCAGTGCTGAGTCTTT
rJMSF045D02+          ATACCTCCAACTATTTCATCTTGATATTGGAATTTGGAATATTTGCAGTGCTGAGTCTTT
                      ____________________________________________________________
consensus             ATACCTCCAACTATTTCATCTTGATATTGGAATTTGGAATATTTGCAGTGCTGAGTCTTT
 
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rJMSF011E24+          TCCTTGCCTTGAGCAAGTAATTTTGGATTTTTGTATCGAGTTACAGGAGGTGCCTGATAC
rJMSF045D02+          TCCTTGCCTTGAGCAAGTAATTTTGGATTTTTGTATCGAGTTACAGGAGGTGCCTGATAC
                      ____________________________________________________________
consensus             TCCTTGCCTTGAGCAAGTAATTTTGGATTTTTGTATCGAGTTACAGGAGGTGCCTGATAC
 
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rJMSF011E24+          ATTGGCAGATATTTTAACATTGAAACTACTCAGTGTGCGTAGCTGCTGTAATAGCACTGA
rJMSF045D02+          ATTGGCAGATATTTTAACATTGAAACTACTCAGTGTGCGTAGCTGCTGTAATAGCACTGA
                      ____________________________________________________________
consensus             ATTGGCAGATATTTTAACATTGAAACTACTCAGTGTGCGTAGCTGCTGTAATAGCACTGA
 
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rJMSF011E24+          AAGTTCAGCGAAGAAAATTGAGGAAGATGTACAAGGCATAGGAAATGAGCAACTGAATAT
rJMSF045D02+          AAGTTCAGCGAAGAAAATTGAGGAAGATGTACAAGGCATAGGAAATGAGCAACTGAATAT
                      ____________________________________________________________
consensus             AAGTTCAGCGAAGAAAATTGAGGAAGATGTACAAGGCATAGGAAATGAGCAACTGAATAT
 
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rJMSF011E24+          CGAGATTATATCACGTAAT                                         
rJMSF045D02+          CGAGATTATATCACGTAATTCAGTGTCAGAGTGTAGAGTTATAAGATTGGCTCGTTTTAG
                      ____________________________________________________________
consensus             CGAGATTATATCACGTAATTCAGTGTCAGAGTGTAGAGTTATAAGATTGGCTCGTTTTAG
 
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rJMSF045D02+          AAGACAGATTAAAGGTATGGTTGAAACGAAATACGGGACATAAGGGAGAGCAAATAAAAA
                      ____________________________________________________________
consensus             AAGACAGATTAAAGGTATGGTTGAAACGAAATACGGGACATAAGGGAGAGCAAATAAAAA
 
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rJMSF045D02+          TTAGGGCATAAAATATTAAATATATACTAATATTGAAGAGCTAAATGCTGATTGTCAAAC
                      ____________________________________________________________
consensus             TTAGGGCATAAAATATTAAATATATACTAATATTGAAGAGCTAAATGCTGATTGTCAAAC
 
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rJMSF045D02+          AAGGACATTGCGAGATAGTTTTCCACTTCAATTGTTGTGTGATTTGAATACCATTTTGTC
                      ____________________________________________________________
consensus             AAGGACATTGCGAGATAGTTTTCCACTTCAATTGTTGTGTGATTTGAATACCATTTTGTC