Contig 004382:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011E24Sequence374009524 (2)747004382 (2)ref|XP_006365693.1|7e-21PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum
JMSF045D02Sequence500009524 (2)839004382 (2)ref|XP_006365693.1|4e-21PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF011E24+ TCTTTGGG
                      ____________________________________________________________
consensus TCTTTGGG
 
. : . : . : . : . : . :
rJMSF011E24+ TNCAAGGGATGAGCATTTATTGAGGAAGCTTTCCCATCTCAAATATTTGAGATGTCTGGT
rJMSF045D02+ GGGATGAGCATTTATTGAGGAAGCTTTCCCATCTCAAATATTTGAGATGTCTGGT
                      ____________________________________________________________
consensus TNCAAGGGATGAGCATTTATTGAGGAAGCTTTCCCATCTCAAATATTTGAGATGTCTGGT
 
. : . : . : . : . : . :
rJMSF011E24+ CTCGCCATCATGTTCATTTGCTGAAATTGACATTCTCGATCATCTTGAATCTCTTTCGTT
rJMSF045D02+ CTCGCCATCATGTTCATTTGCTGAAATTGACATTCTCGATCATCTTGAATCTCTTTCGTT
                      ____________________________________________________________
consensus CTCGCCATCATGTTCATTTGCTGAAATTGACATTCTCGATCATCTTGAATCTCTTTCGTT
 
. : . : . : . : . : . :
rJMSF011E24+ ATACAATAGTTGGAATAGGGATTCACATGACTGTGGGAATCCACATCTTCTTAATGATCT
rJMSF045D02+ ATACAATAGTTGGAATAGGGATTCACATGACTGTGGGAATCCACATCTTCTTAATGATCT
                      ____________________________________________________________
consensus ATACAATAGTTGGAATAGGGATTCACATGACTGTGGGAATCCACATCTTCTTAATGATCT
 
. : . : . : . : . : . :
rJMSF011E24+ TAAACTCAGCAAGTTTCCATCAAGTATTAAGGAAATAAATTTCGAGGGTATTACACTTTC
rJMSF045D02+ TAAACTCAGCAAGTTTCCATCAAGTATTAAGGAAATAAATTTCGAGGGTATTACACTTTC
                      ____________________________________________________________
consensus TAAACTCAGCAAGTTTCCATCAAGTATTAAGGAAATAAATTTCGAGGGTATTACACTTTC
 
. : . : . : . : . : . :
rJMSF011E24+ GTCGTCAGCAATTTCAATAATTGCACAACTCTCCAATCTTGAGGCTCTAATACTAACGTG
rJMSF045D02+ GTCGTCAGCAATTTCAATAATTGCACAACTCTCCAATCTTGAGGCTCTAATACTAACGTG
                      ____________________________________________________________
consensus GTCGTCAGCAATTTCAATAATTGCACAACTCTCCAATCTTGAGGCTCTAATACTAACGTG
 
. : . : . : . : . : . :
rJMSF011E24+ TTCCAAGTTTGAGGGTTTAGAATGGAATGTGGATGAGGAAACCCGATTCCCCAAACTAAA
rJMSF045D02+ TTCCAAGTTTGAGGGTTTAGAATGGAATGTGGATGAGGAAACCCGATTCCCCAAACTAAA
                      ____________________________________________________________
consensus TTCCAAGTTTGAGGGTTTAGAATGGAATGTGGATGAGGAAACCCGATTCCCCAAACTAAA
 
. : . : . : . : . : . :
rJMSF011E24+ ATACCTCCAACTATTTCATCTTGATATTGGAATTTGGAATATTTGCAGTGCTGAGTCTTT
rJMSF045D02+ ATACCTCCAACTATTTCATCTTGATATTGGAATTTGGAATATTTGCAGTGCTGAGTCTTT
                      ____________________________________________________________
consensus ATACCTCCAACTATTTCATCTTGATATTGGAATTTGGAATATTTGCAGTGCTGAGTCTTT
 
. : . : . : . : . : . :
rJMSF011E24+ TCCTTGCCTTGAGCAAGTAATTTTGGATTTTTGTATCGAGTTACAGGAGGTGCCTGATAC
rJMSF045D02+ TCCTTGCCTTGAGCAAGTAATTTTGGATTTTTGTATCGAGTTACAGGAGGTGCCTGATAC
                      ____________________________________________________________
consensus TCCTTGCCTTGAGCAAGTAATTTTGGATTTTTGTATCGAGTTACAGGAGGTGCCTGATAC
 
. : . : . : . : . : . :
rJMSF011E24+ ATTGGCAGATATTTTAACATTGAAACTACTCAGTGTGCGTAGCTGCTGTAATAGCACTGA
rJMSF045D02+ ATTGGCAGATATTTTAACATTGAAACTACTCAGTGTGCGTAGCTGCTGTAATAGCACTGA
                      ____________________________________________________________
consensus ATTGGCAGATATTTTAACATTGAAACTACTCAGTGTGCGTAGCTGCTGTAATAGCACTGA
 
. : . : . : . : . : . :
rJMSF011E24+ AAGTTCAGCGAAGAAAATTGAGGAAGATGTACAAGGCATAGGAAATGAGCAACTGAATAT
rJMSF045D02+ AAGTTCAGCGAAGAAAATTGAGGAAGATGTACAAGGCATAGGAAATGAGCAACTGAATAT
                      ____________________________________________________________
consensus AAGTTCAGCGAAGAAAATTGAGGAAGATGTACAAGGCATAGGAAATGAGCAACTGAATAT
 
. : . : . : . : . : . :
rJMSF011E24+ CGAGATTATATCACGTAAT
rJMSF045D02+ CGAGATTATATCACGTAATTCAGTGTCAGAGTGTAGAGTTATAAGATTGGCTCGTTTTAG
                      ____________________________________________________________
consensus CGAGATTATATCACGTAATTCAGTGTCAGAGTGTAGAGTTATAAGATTGGCTCGTTTTAG
 
. : . : . : . : . : . :
rJMSF045D02+ AAGACAGATTAAAGGTATGGTTGAAACGAAATACGGGACATAAGGGAGAGCAAATAAAAA
                      ____________________________________________________________
consensus AAGACAGATTAAAGGTATGGTTGAAACGAAATACGGGACATAAGGGAGAGCAAATAAAAA
 
. : . : . : . : . : . :
rJMSF045D02+ TTAGGGCATAAAATATTAAATATATACTAATATTGAAGAGCTAAATGCTGATTGTCAAAC
                      ____________________________________________________________
consensus TTAGGGCATAAAATATTAAATATATACTAATATTGAAGAGCTAAATGCTGATTGTCAAAC
 
. : . : . : . : . : . :
rJMSF045D02+ AAGGACATTGCGAGATAGTTTTCCACTTCAATTGTTGTGTGATTTGAATACCATTTTGTC
                      ____________________________________________________________
consensus AAGGACATTGCGAGATAGTTTTCCACTTCAATTGTTGTGTGATTTGAATACCATTTTGTC