Contig 004374:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009I16Sequence334018850752004374 (3)ref|XP_006354631.1|3e-103PREDICTED: UMP-CMP kinase-like [Solanum tuberosum]
JMSF043J13Sequence641004374 (3)ref|XP_009760216.1|6e-88PREDICTED: uncharacterized protein LOC104212604 isoform X1 [Nicotiana sylvestri602004374 (3)ref|XP_009760216.1|4e-88PREDICTED: uncharacterized protein LOC104212604 isoform X1 [Nicotiana sylvestri

Alignment

This contig is upended


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rJMSF009I16+                  CACATAACAAAAAGGTTAAGGTTGTCTTTGTCCTGGGAGGCCCAGGAAGTGG
                      ____________________________________________________________
consensus                     CACATAACAAAAAGGTTAAGGTTGTCTTTGTCCTGGGAGGCCCAGGAAGTGG
 
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rJMSF009I16+          CAAGGGTACTCAATGTGCAAAGATTGTTGAACATTTTGGTTACACCCATTTGAGCGCCGG
                      ____________________________________________________________
consensus             CAAGGGTACTCAATGTGCAAAGATTGTTGAACATTTTGGTTACACCCATTTGAGCGCCGG
 
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rJMSF009I16+          GGATCTCCTTCGAGCAGAGATCAAGTCTGGTTCTCAAAATGGGATCATGATTCAGAGGAT
                      ____________________________________________________________
consensus             GGATCTCCTTCGAGCAGAGATCAAGTCTGGTTCTCAAAATGGGATCATGATTCAGAGGAT
 
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rJMSF009I16+          GATTAAAGAAGGAAAAATCGTTCCTGCTGGGGTAACAATTGCCCTTCTCCAAAGAGCAAT
                      ____________________________________________________________
consensus             GATTAAAGAAGGAAAAATCGTTCCTGCTGGGGTAACAATTGCCCTTCTCCAAAGAGCAAT
 
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rJMSF009I16+          CCAGGAAACTGAGAATGATAAATTTCTTATTGATGGTTTCCCTCGCAATGAGGAAAACCG
                      ____________________________________________________________
consensus             CCAGGAAACTGAGAATGATAAATTTCTTATTGATGGTTTCCCTCGCAATGAGGAAAACCG
 
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rJMSF009I16+          TGAAGCTTTTGAACGTATTACTGGAATTCAGCCAGATTTCGTACTCTTCTTTGATTGTAC
                      ____________________________________________________________
consensus             TGAAGCTTTTGAACGTATTACTGGAATTCAGCCAGATTTCGTACTCTTCTTTGATTGTAC
 
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rJMSF009I16+          TGAAGAAGAGATGGCGAGGCGCCTTTTGAACCGGAACCAGGACAGAGAAGATGACAACAT
                      ____________________________________________________________
consensus             TGAAGAAGAGATGGCGAGGCGCCTTTTGAACCGGAACCAGGACAGAGAAGATGACAACAT
 
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rJMSF009I16+          TGTTACTATAAGGAAGAGGTTTAATGTTTTCAAGGAATCTACACTCCCAGTTATTGAATA
                      ____________________________________________________________
consensus             TGTTACTATAAGGAAGAGGTTTAATGTTTTCAAGGAATCTACACTCCCAGTTATTGAATA
 
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rJMSF009I16+          TTACAAATCAAAGGGCAAGGTTCTAAAGATTGATGCTGTCAAGCCTCCAAATGAAGTTTT
                      ____________________________________________________________
consensus             TTACAAATCAAAGGGCAAGGTTCTAAAGATTGATGCTGTCAAGCCTCCAAATGAAGTTTT
 
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rJMSF009I16+          TGAAGCAGTCAAAGCAGTATTCACAGATGGAAAGGTAAAGCAGCGCTGCAATGGCTTGGA
                      ____________________________________________________________
consensus             TGAAGCAGTCAAAGCAGTATTCACAGATGGAAAGGTAAAGCAGCGCTGCAATGGCTTGGA
 
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rJMSF009I16+          TAAAGTCAATATCCCTTGCTATGCATGGAGAATGATGTTTAGGAGATCGATAGTGTAATT
                      ____________________________________________________________
consensus             TAAAGTCAATATCCCTTGCTATGCATGGAGAATGATGTTTAGGAGATCGATAGTGTAATT
 
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rJMSF009I16+          CTGCTTGTAAGATTTGTTGCCATAAGCCCATAATAATAGTTGCATTACCATTCTGTAAAT
JMSF043J13+                                    GCCCATAATAATAGTTGCATTACCATTCTGTAAAT
rJMSF043J13-                                                                    AT
                      ____________________________________________________________
consensus             CTGCTTGTAAGATTTGTTGCCATAAGCCCATAATAATAGTTGCATTACCATTCTGTAAAT
 
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rJMSF009I16+          TTGTTGCAGATAAATTGTTGTTATACAAATATGATACCGT                    
JMSF043J13+           TTGTTGCAGATAAATTGTTGTTATACAAATATGATACCGTTTTCTGCAATGGTATCAAGA
rJMSF043J13-          TTGTTGCAGATAAATTGTTGTTATACAAATATGATACCGTTTTCTGCAATGGTATCAAGA
                      ____________________________________________________________
consensus             TTGTTGCAGATAAATTGTTGTTATACAAATATGATACCGTTTTCTGCAATGGTATCAAGA
 
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JMSF043J13+           ACCAATGCCAGCCTGCCTTCTATCCTCTCATTCTTCCTAGGCTCATATGATATTGCAAAT
rJMSF043J13-          ACCAATGCCAGCCTGCCTTCTATCCTCTCATTCTTCCTAGGCTCATATGATATTGCAAAT
                      ____________________________________________________________
consensus             ACCAATGCCAGCCTGCCTTCTATCCTCTCATTCTTCCTAGGCTCATATGATATTGCAAAT
 
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JMSF043J13+           ACATCAGCATCCTTGGATCGATCAGCAATCAGCCTGCCTATAACCTTGGCCGCGTTGTTG
rJMSF043J13-          ACATCAGCATCCTTGGATCGATCAGCAATCAGCCTGCCTATAACCTTGGCCGCGTTGTTG
                      ____________________________________________________________
consensus             ACATCAGCATCCTTGGATCGATCAGCAATCAGCCTGCCTATAACCTTGGCCGCGTTGTTG
 
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JMSF043J13+           TCAATGAGCGATGGCAGTGTAGTCCTAAGGTCCTTGGCATTCGTAGTAGCCACTGATATC
rJMSF043J13-          TCAATGAGCGATGGCAGTGTAGTCCTAAGGTCCTTGGCATTCGTAGTAGCCACTGATATC
                      ____________________________________________________________
consensus             TCAATGAGCGATGGCAGTGTAGTCCTAAGGTCCTTGGCATTCGTAGTAGCCACTGATATC
 
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JMSF043J13+           ACCTTGCTGGTTGGTCGGTGTACCACTTTGGCATGGATAAAACGTTTTGAAAAGAAAACG
rJMSF043J13-          ACCTTGCTGGTTGGTCGGTGTACCACTTTGGCATGGATAAAACGTTTTGAAAAGAAAACG
                      ____________________________________________________________
consensus             ACCTTGCTGGTTGGTCGGTGTACCACTTTGGCATGGATAAAACGTTTTGAAAAGAAAACG
 
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JMSF043J13+           TCCAGTAAAAATGGTCTCATATACATATCTGTCTTCTGTTTCCATGACTTCCGACTAGGT
rJMSF043J13-          TCCAGTAAAAATGGTCTCATATACATATCTGTCTTCTGTTTCCATGACTTCCGACTAGGT
                      ____________________________________________________________
consensus             TCCAGTAAAAATGGTCTCATATACATATCTGTCTTCTGTTTCCATGACTTCCGACTAGGT
 
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JMSF043J13+           CTCTTTTCAGCTTCACTCCGTGATCTCCTTGTGTAGGCAGCTGCAACAATAACATTCTGT
rJMSF043J13-          CTCTTTTCAGCTTCACTCCGTGATCTCCTTGTGTAGGCAGCTGCAACAATAACATTCTGT
                      ____________________________________________________________
consensus             CTCTTTTCAGCTTCACTCCGTGATCTCCTTGTGTAGGCAGCTGCAACAATAACATTCTGT
 
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JMSF043J13+           TTAAGCGAGGGGTTTCGACGGCACGGGGAGAAAGACGTAGAGATTTTCAGCTGCGGGAAG
rJMSF043J13-          TTAAGCGAGGGGTTTCGACGGCACGGGGAGAAAGACGTAGAGATTTTCAGCTGCGGGAAG
                      ____________________________________________________________
consensus             TTAAGCGAGGGGTTTCGACGGCACGGGGAGAAAGACGTAGAGATTTTCAGCTGCGGGAAG
 
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JMSF043J13+           GACGAAGACCACGAGAGAGAATCTGGTTTCTCTCTCTTCCCGTTAGCGCAAAACTCAGAG
rJMSF043J13-          GACGAAGACCACGAGAGAGAATCTGGTTTCTCTCTCTTCCCGTTAGCGCAAAACTCAGAG
                      ____________________________________________________________
consensus             GACGAAGACCACGAGAGAGAATCTGGTTTCTCTCTCTTCCCGTTAGCGCAAAACTCAGAG
 
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JMSF043J13+           GAGAGAGAGAAAGATGGATGTGAAGACGTTAACGACAAGCAGACTGCCATTTTTGCTTCC
rJMSF043J13-          GAGAGAGAGAAAGATGGATGTGAAGACGTTAACGACAAGCAGACTGCCATTTTTGCTTCC
                      ____________________________________________________________
consensus             GAGAGAGAGAAAGATGGATGTGAAGACGTTAACGACAAGCAGACTGCCATTTTTGCTTCC