Contig 004373:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF032N14+                                                          GAGGGGACAACG
rJMSF043J03+                            ATCTGTCATGGANGAGGTTGTTGCGATTGCGAGGGGACAACG
                      ____________________________________________________________
consensus                               ATCTGTCATGGANGAGGTTGTTGCGATTGCGAGGGGACAACG
 
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rJMSF032N14+          ACAGATCATGCACCAGATAGACATTCTAAGCAATACCATACGTGAGACGTATGGCGAGAG
rJMSF043J03+          ACAGATCATGCACCAGATAGACATTNTAAGCAATACCATACGTGAGACGTATGGCGAGAG
                      ____________________________________________________________
consensus             ACAGATCATGCACCAGATAGACATTCTAAGCAATACCATACGTGAGACGTATGGCGAGAG
 
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rJMSF032N14+          GTCGCACCAAGAAAGAAGAGGAAGGCAAGAAACGGGAGCAGATATTGAATCAATCGGCAT
rJMSF043J03+          GTCGCACCAAGAAAGAAGAGGAAGGCAAGAAACGGGAGCAGATATTGAATCAATCGGCAT
                      ____________________________________________________________
consensus             GTCGCACCAAGAAAGAAGAGGAAGGCAAGAAACGGGAGCAGATATTGAATCAATCGGCAT
 
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rJMSF032N14+          TCCTCTAATCCTCACTTTGGCGATTGGTGGTATAGGTATCTTCTTGTTCAGAACCCTGTC
rJMSF043J03+          TCCTCTAATCCTCACTTTGGCGATTGGTGGTATAGGTATCTTCTTGTTCAGAACCCTGTC
                      ____________________________________________________________
consensus             TCCTCTAATCCTCACTTTGGCGATTGGTGGTATAGGTATCTTCTTGTTCAGAACCCTGTC
 
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rJMSF032N14+          ATCATCTTAGAGGTCAACTCGGGCGCCAAATTATATATTCGCAAACACGTACTACTATAC
rJMSF043J03+          ATCATCTTAGAGGTCAACTCGGGCGCCAAATTATATATTCGCAAACACGTACTACTATAC
                      ____________________________________________________________
consensus             ATCATCTTAGAGGTCAACTCGGGCGCCAAATTATATATTCGCAAACACGTACTACTATAC
 
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rJMSF032N14+          CAAGCCATACATGTAGAGATAGATAGGGAAACCACCTCCCGTTGTCAACTGACAAGATAA
rJMSF043J03+          CAAGCCATACATGTAGAGATAGATAGGGAAACCACCTCCCGTTGTCAACTGACAAGATAA
                      ____________________________________________________________
consensus             CAAGCCATACATGTAGAGATAGATAGGGAAACCACCTCCCGTTGTCAACTGACAAGATAA
 
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rJMSF032N14+          CTTTTCGTGTATCTGGGCTCCTATTTCTCTCATAGGTCAGCTGCAGTTGTTGGACTTCAT
rJMSF043J03+          CTTTTCGTGTATCTGGGCTCCTATTTCTCTCATAGGTCAGCTGCAGTTGTTGGACTTCAT
                      ____________________________________________________________
consensus             CTTTTCGTGTATCTGGGCTCCTATTTCTCTCATAGGTCAGCTGCAGTTGTTGGACTTCAT
 
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rJMSF032N14+          ATTTAAAACAGCGGTCAGCACTGCAAGAAAGTTTTTATCTTGAACCTTTCTTGTTTAGTT
rJMSF043J03+          ATTTAAAACAGCGGTCAGCACTGCAAGAAAGTTTTTATCTTGAACCTTTCTTGTTTAGTT
                      ____________________________________________________________
consensus             ATTTAAAACAGCGGTCAGCACTGCAAGAAAGTTTTTATCTTGAACCTTTCTTGTTTAGTT
 
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rJMSF032N14+          TACTGAGCAAAGAAGCGACTCGTCCCAAGGCCGGTGTGGGTTTTTATGATCCCCCGGGAT
rJMSF043J03+          TACTGAGCAAAGAAGCGACTCGTCCCAAGGCCGGTGTGGGTTTTTATGATCCCCCGGGAT
                      ____________________________________________________________
consensus             TACTGAGCAAAGAAGCGACTCGTCCCAAGGCCGGTGTGGGTTTTTATGATCCCCCGGGAT
 
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JMFN035H07-                                         AAATCATTCTTCTTCATTTTGCCTAATGAA
rJMSF032N14+          TTTCAGAGATCTTGCTGCAACTTCACACCAAAATCATTCTTCTTCATTTTGCCTAATGAA
rJMSF043J03+          TTTCAGAGATCTTGCTGCAACTTCACACCAAAATCATTCTTCTTCATTTTGCCTAATGAA
                      ____________________________________________________________
consensus             TTTCAGAGATCTTGCTGCAACTTCACACCAAAATCATTCTTCTTCATTTTGCCTAATGAA
 
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JMFN035H07-           AACGAGAAACAAAGGTATGGGGAATGTGGTGTAGTTGTAGTTCTTTTGAACACTTTTATA
rJMSF032N14+          AACGAGAAACAAAGGTATGGGGAATGTGGTGTAGTTGTAGTTCTTTTGAACACTTTTATA
rJMSF043J03+          AACGAGAAACAAAGGTATGGGGAATGTGGTGTAGTTGTAGTTCTTTTGAACACTTTTATA
                      ____________________________________________________________
consensus             AACGAGAAACAAAGGTATGGGGAATGTGGTGTAGTTGTAGTTCTTTTGAACACTTTTATA
 
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JMFN035H07-           ATGCAAAATCCCTTTAGTCTTCTGTCTGTTCTTTCATCATGAGTGGGCTAATACAGGCAA
rJMSF032N14+          ATGCAAAATCCCTTTAGTCTTCTGTCTGTTCTTTCATCATGAGTGGGCTAATACAGGCAA
rJMSF043J03+          ATGCAAAATCCCTTTAGTCTTCTGTCTGTTCTTTCATCATGAGTGGGCTAATACAGGCAA
                      ____________________________________________________________
consensus             ATGCAAAATCCCTTTAGTCTTCTGTCTGTTCTTTCATCATGAGTGGGCTAATACAGGCAA
 
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JMFN035H07-           AATATTCATTGAAGCAGTAAAGAACTCATTTTTC                          
rJMSF032N14+          AATATTCATTGAAGCAGTAAAGAACTCATTTTTCACAAAACTTCTGAAAAACAAACT   
rJMSF043J03+          AATATTCATTGAAGCAGTAAAGAACTCATTTTTCACAAAACTTCTGAAAAACAAACTATC
                      ____________________________________________________________
consensus             AATATTCATTGAAGCAGTAAAGAACTCATTTTTCACAAAACTTCTGAAAAACAAACTATC