clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF011M16 | Sequence | 575 | 004366 (7) | emb|CDP11723.1| | 1e-85 | unnamed protein product [Coffea canephora] | 768 | 004366 (7) | ref|XP_010325581.1| | 7e-130 | PREDICTED: secretory carrier-associated membrane protein 4 [Solanum lycopersicu |
JMFN042C16 | Sequence | 617 | 004366 (7) | emb|CDP11723.1| | 5e-87 | unnamed protein product [Coffea canephora] | |||||
JMSF018L08 | Sequence | 778 | 004366 (7) | ref|XP_009609950.1| | 8e-99 | PREDICTED: secretory carrier-associated membrane protein 4 isoform X1 [Nicotian | |||||
JMSF018M08 | Sequence | 483 | 004366 (7) | emb|CDP11723.1| | 2e-53 | unnamed protein product [Coffea canephora] | 733 | 004366 (7) | ref|XP_009609952.1| | 2e-88 | PREDICTED: secretory carrier-associated membrane protein 4 isoform X3 [Nicotian |
JMSF042K11 | Sequence | 798 | 024260 | ref|XP_011082326.1| | 8e-48 | PREDICTED: secretory carrier-associated membrane protein 4-like [Sesamum indicu | 769 | 004366 (7) | ref|NP_001241252.1| | 8e-36 | uncharacterized protein LOC100806586 [Glycine max] gb|ACU19390.1| unknown [Glyci |
This contig is upended
. : . : . : . : . : . :
JMSF018M08- GAGTCGACAGATTAAGGAAAGTGCCG
____________________________________________________________
consensus GAGTCGACAGATTAAGGAAAGTGCCG
. : . : . : . : . : . :
JMSF018M08- TAGTGCTTCACTGGACACGTATTCTCTCCGTAGCTCTCTTTCAGGAGAGTTTTTCTGAGG
____________________________________________________________
consensus TAGTGCTTCACTGGACACGTATTCTCTCCGTAGCTCTCTTTCAGGAGAGTTTTTCTGAGG
. : . : . : . : . : . :
JMSF018M08- ATTTTGTGCGAGAATTTGAAGGTTTTAATCACATCATGAATCGGCGAAACGATCCCAACC
JMFF011M16- ATCGGCGAAACGATCCCAATC
JMFN042C16- CATGAATCGGCGAAACGATCCCAACC
____________________________________________________________
consensus ATTTTGTGCGAGAATTTGAAGGTTTTAATCACATCATGAATCGGCGAAACGATCCCAACC
. : . : . : . : . : . :
JMSF018M08- CTTTCGATGATGAAGAGCAAGAAGTCAATCCATTTTCGAATGGTGGTAATGCTCCAGGAT
JMFF011M16- CTTTTGACGATGAAGAGCAAGAAGTCAATCCATTTTCGAATGGTGGTAATGCTCCAGGAT
JMFN042C16- CTTTCGATGATGAAGAGCAAGAAGTCAATCCATTTTCGAATGGTGGTAATGCTCCAGGAT
____________________________________________________________
consensus CTTTCGATGATGAAGAGCAAGAAGTCAATCCATTTTCGAATGGTGGTAATGCTCCAGGAT
. : . : . : . : . : . :
JMSF018M08- CAAAATCACGCATTCCTCAAATGGTTGCTAATACTCTTGGTTTTGGTCAGAAACATGATG
JMFF011M16- CAAAATCTCGCATTACTCAAATGGTGGCTAATACTCTTGGTTTTGGTCAAAAACATGATG
JMFN042C16- CAAAATCACGCATTCCTCAAATGGTTGCTAATACTCTTGGTTTTGGTCAGAAACATGATG
____________________________________________________________
consensus CAAAATCACGCATTCCTCAAATGGTTGCTAATACTCTTGGTTTTGGTCAGAAACATGATG
. : . : . : . : . : . :
JMSF018M08- CCACTGTTGATATACCACTTGATTCACTGAATGACCCCAAGAAAAAACAGAAGGAACTGG
JMFF011M16- CCACTGTTGATATACCACTTGATTCGATGAATGATCCCAAGAAAAAACAGAAGGAACTGG
JMFN042C16- CCACTGTTGATATACCACTTGATTCACTGAATGACCCCAAGAAAAAACAGAAGGAACTGG
rJMFF011M16+ CAGAAGGAACTGG
____________________________________________________________
consensus CCACTGTTGATATACCACTTGATTCACTGAATGACCCCAAGAAAAAACAGAAGGAACTGG
. : . : . : . : . : . :
JMSF018M08- CAGCTTGGGAAGCAGATTTGAAAAGGAGAGAAAGGGACATCAAGCGCCGAGAAGATGCTG
JMFF011M16- CAGCCTGGGAAGCAGATTTGAAAAGGAGAGAAATGGACATCAAACGCCGAGAAGATGCTG
JMFN042C16- CAGCTTGGGAAGCAGATTTGAAAAGGAGAGAAAGGGACATCAAGCGCCGAGAAGATGCTG
rJMFF011M16+ CAGCCTGGGAAGCAGATTTGAAAAGGAGAGAAATGGACATCAAACGCCGAGAAGATGCTG
____________________________________________________________
consensus CAGCCTGGGAAGCAGATTTGAAAAGGAGAGAAATGGACATCAAACGCCGAGAAGATGCTG
. : . : . : . : . : . :
JMSF018M08- TTTCTGGAGCTGGTGTCCCCGTCAGTGATAAGAACTGGCCTCCTTTTTTCCCAATTATAC
JMFF011M16- TTGCTGGAGCTGGTGTCCCTGTCAGTGATAAGAATTGGCCTCCCTTTCTCCCAATTATAC
JMFN042C16- TTTCTGGAGCTGGTGTCCCCGTCAGTGATAAGAACTGGCCTCCTTTTTTCCCAATTATAC
rJMFF011M16+ TTGCTGGAGCTGGTGTCCCTGTCAGTGATAAGAATTGGCCTCCCTTTCTCCCAATTATAC
rJMSF018M08+ TTTCCCAATTATAC
rJMSF018L08+ CTGGAGCTGGTGTCCCCGTCAGTGATAAGAACTGGCCTCCTTTTTTCCCAATTATAC
____________________________________________________________
consensus TTGCTGGAGCTGGTGTCCCCGTCAGTGATAAGAACTGGCCTCCTTTTTTCCCAATTATAC
. : . : . : . : . : . :
JMSF018M08- ACCATGATATAGTCNATGAAATACCAGTTGAATCTCA
JMFF011M16- ACCATGATATAGTCAATGAAATACCGGTTCAATCTCAGAAAATGCAGTACTTGGCTTTTG
JMFN042C16- ACCATGATATAGTCAATGAAATACCAGTTGAATCTCAGAAAATGCAGTACTTGGCTTTTG
rJMFF011M16+ ACCATGATATAGTCAATGAAATACCGGTTCAATCTCAGAAAATGCAGTACTTGGCTTTTG
rJMSF018M08+ ACCATGATATAGTCAATGAAATACCAGTTGAATCTCAGAAAATGCAGTACTTGGCTTTTG
rJMSF018L08+ ACCATGATATAGTCAATGAAATACCAGTTGAATCTCAGAAAATGCAGTACTTGGCTTTTG
____________________________________________________________
consensus ACCATGATATAGTCAATGAAATACCAGTTGAATCTCAGAAAATGCAGTACTTGGCTTTTG
. : . : . : . : . : . :
JMFF011M16- CCAGTTGGTTAGGTATTGTTCTTTGCCTTGTATATAATATTGTTGCGGTGACTGTTTGTT
JMFN042C16- CCAGTTGGTTAGGTATTGTTCTTTGCCTTGTATATAATATTGTCGCAGTGACTGTTTGTT
rJMFF011M16+ CCAGTTGGTTAGGTATTGTTCTTTGCCTTGTATATAATATTGTTGCGGTGACTGTTTGTT
rJMSF018M08+ CCAGTTGGTTAGGTATTGTTCTTTGCCTTGTATATAATATTGTCGCAGTGACTGTTTGTT
rJMSF018L08+ CCAGTTGGTTAGGTATTGTTCTTTGCCTTGTATATAATATTGTCGCAGTGACTGTTTGTT
____________________________________________________________
consensus CCAGTTGGTTAGGTATTGTTCTTTGCCTTGTATATAATATTGTCGCAGTGACTGTTTGTT
. : . : . : . : . : . :
JMFF011M16- GGAT
JMFN042C16- GGATAAAGGGTGACGGTGTCAAGATCTTTCTACTTGCAATAATATATGCATTAATGGG
rJMFF011M16+ GGATAAAGGGTGAAGGTGTCAAGATCTTTCTACTTGCTGTAATATATGCCTTAATGGGGT
rJMSF018M08+ GGATAAAGGGTGACGGTGTCAAGATCTTTCTACTTGCAATAATATATGCATTAATGGGGT
rJMSF018L08+ GGATAAAGGGTGACGGTGTCAAGATCTTTCTACTTGCAATAATATATGCATTAATGGGGT
____________________________________________________________
consensus GGATAAAGGGTGACGGTGTCAAGATCTTTCTACTTGCAATAATATATGCATTAATGGGGT
. : . : . : . : . : . :
rJMFF011M16+ GCCCTCTATCCTATGTTCTGTGGTACAGGCCCCTTTATAATGCAATGAGGACTGACAGTG
rJMSF018M08+ GCCCCCTATCCTATGTTTTGTGGTACAGGCCCCTTTATAATGCAATGAGGACGAACAGTG
rJMSF018L08+ GCCCCCTATCCTATGTTTTGTGGTACAGGCCCCTTTATAATGCAATGAGGACGAACAGTG
rJMSF042K11+ TATGTTTTGTGGTACAGGCCCCTTTATAATGCAATGAGGACGAACAGTG
____________________________________________________________
consensus GCCCCCTATCCTATGTTTTGTGGTACAGGCCCCTTTATAATGCAATGAGGACGAACAGTG
. : . : . : . : . : . :
rJMFF011M16+ CACTCAAGTTTGGTTGGTTTTTCTTGTTCTACTTGCTCCATATTGGATTTTGCATATTTG
rJMSF018M08+ CACTCAAATTTGGTTGGTTTTTCATGTTCTACTTGCTCCATATTGGATTTTGCATATTTG
rJMSF018L08+ CACTCAAATTTGGTTGGTTTTTCATGTTCTACTTGCTCCATATTGGATTTTGCATATTTG
rJMSF042K11+ CACTCAAATTTGGTTGGTTTTTCATGTTCTACTTGCTCCATATTGGATTTTGCATATTTG
____________________________________________________________
consensus CACTCAAATTTGGTTGGTTTTTCATGTTCTACTTGCTCCATATTGGATTTTGCATATTTG
. : . : . : . : . : . :
rJMFF011M16+ CAGCTATAGCTCCTCCCATTGTCTTTAATGGAAAATCATTGACGGGCATCCTTGCTGCAA
rJMSF018M08+ CTGCTATAGCTCCTCCAATTATCTTTCATGGAAAATCATTGACGGGCATCCTTGCTGCAA
rJMSF018L08+ CTGCTATAGCTCCTCCAATTATCTTTCATGGAAAATCATTGACGGGCATCCTTGCTGCAA
rJMSF042K11+ CTGCTATAGCTCCTCCAATTATCTTTCATGGAAAATCATTGACGGGCATCCTTGCTGCAA
____________________________________________________________
consensus CTGCTATAGCTCCTCCAATTATCTTTCATGGAAAATCATTGACGGGCATCCTTGCTGCAA
. : . : . : . : . : . :
rJMFF011M16+ TTGATGTCTTCTCTGATAATGTGTTGGTTGGG
rJMSF018M08+ TTGACGTCTTCTCTGATCACGTATTGGTTGGGGTAAGTTGCTGCAATTGACATCTTCCGA
rJMSF018L08+ TTGACGTCTTCTCTGATCACGTATTGGTTGGGGTAAGTTGCTGCAATTGACATCTTCCGA
rJMSF042K11+ TTGACGTCTTCTCTGATCACGTATTGGTTGGGGTAAGTTGCTGCAATTGACATCTTCCGA
____________________________________________________________
consensus TTGACGTCTTCTCTGATCACGTATTGGTTGGGGTAAGTTGCTGCAATTGACATCTTCCGA
. : . : . : . : . : . :
rJMSF018M08+ GTAGCATATATATCTTCGATATCCATATTGTTTATTTGCAGATATTCTATCTGGTTGGAT
rJMSF018L08+ GTAGCATATATATCTTCGATATCCATATTGTTTATTTGCAGATATTCTATCTGGTTGGAT
rJMSF042K11+ GTAGCATATATATCTTCGATATCCATATTGTTTATTTGCAGATATTCTATCTGGTTGGAT
____________________________________________________________
consensus GTAGCATATATATCTTCGATATCCATATTGTTTATTTGCAGATATTCTATCTGGTTGGAT
. : . : . : . : . : . :
rJMSF018M08+ TTGGCTTGTTTTGCTTAGAGGCATTGCTAAGCTTGTGGGTGCTTCAG
rJMSF018L08+ TTGGCTTGTTTTGCTTAGAGGCATTGCTAAGCTTGTGGGTGCTTCAG
rJMSF042K11+ TTGGCTTGTTTTGCTTAGAGGCATTGCTAAGCTTGTGGGTGCTTCAGGTTTGTGACTATA
____________________________________________________________
consensus TTGGCTTGTTTTGCTTAGAGGCATTGCTAAGCTTGTGGGTGCTTCAGGTTTGTGACTATA
. : . : . : . : . : . :
rJMSF042K11+ AAAATGGACATTCACACACCGTTATGTTCAGTACATAGTGCATTTGACTGCATTCTTGTG
____________________________________________________________
consensus AAAATGGACATTCACACACCGTTATGTTCAGTACATAGTGCATTTGACTGCATTCTTGTG
. : . : . : . : . : . :
rJMSF042K11+ AGAATGGGTGCTTGGATTGTGTGCAAAGTTTTCTTTCCTTCTCTTCTATAACTTATTTGC
____________________________________________________________
consensus AGAATGGGTGCTTGGATTGTGTGCAAAGTTTTCTTTCCTTCTCTTCTATAACTTATTTGC
. : . : . : . : . : . :
rJMSF042K11+ AAACCCTATGTTTCAGAAGATGAAAGTCACGTGCATTTACATTACACTTTCATATCTGGC
____________________________________________________________
consensus AAACCCTATGTTTCAGAAGATGAAAGTCACGTGCATTTACATTACACTTTCATATCTGGC
. : . : . : . : . : . :
rJMSF042K11+ TTGCTTAAACCTTTCACATTACCTTTTCCCTTGTGCAGAAAGTTTACATGTATTTCCGAG
____________________________________________________________
consensus TTGCTTAAACCTTTCACATTACCTTTTCCCTTGTGCAGAAAGTTTACATGTATTTCCGAG
. : . : . : . : . : . :
rJMSF042K11+ GGCATAACCACAGGTAATCCAAGCTTTCGGTTCCTGATAATGATATTGTGTGGGTATGTG
____________________________________________________________
consensus GGCATAACCACAGGTAATCCAAGCTTTCGGTTCCTGATAATGATATTGTGTGGGTATGTG
. : . : . : . : . : . :
rJMSF042K11+ AAGAAACAATATATCAAGGTGCCTCAGTATAGTCTGGTCTTATCTGATGTATTTGATTGA
____________________________________________________________
consensus AAGAAACAATATATCAAGGTGCCTCAGTATAGTCTGGTCTTATCTGATGTATTTGATTGA
. : . : . : . : . : . :
rJMSF042K11+ GTTATACCTACAGTCTTGTGTTTGTTGGCAGCATATTTNGTATAAAAGTTGTCAATGGTT
____________________________________________________________
consensus GTTATACCTACAGTCTTGTGTTTGTTGGCAGCATATTTNGTATAAAAGTTGTCAATGGTT