Contig 004366:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011M16Sequence575004366 (7)emb|CDP11723.1|1e-85unnamed protein product [Coffea canephora]768004366 (7)ref|XP_010325581.1|7e-130PREDICTED: secretory carrier-associated membrane protein 4 [Solanum lycopersicu
JMFN042C16Sequence617004366 (7)emb|CDP11723.1|5e-87unnamed protein product [Coffea canephora]
JMSF018L08Sequence778004366 (7)ref|XP_009609950.1|8e-99PREDICTED: secretory carrier-associated membrane protein 4 isoform X1 [Nicotian
JMSF018M08Sequence483004366 (7)emb|CDP11723.1|2e-53unnamed protein product [Coffea canephora]733004366 (7)ref|XP_009609952.1|2e-88PREDICTED: secretory carrier-associated membrane protein 4 isoform X3 [Nicotian
JMSF042K11Sequence798024260ref|XP_011082326.1|8e-48PREDICTED: secretory carrier-associated membrane protein 4-like [Sesamum indicu769004366 (7)ref|NP_001241252.1|8e-36uncharacterized protein LOC100806586 [Glycine max] gb|ACU19390.1| unknown [Glyci

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF018M08- GAGTCGACAGATTAAGGAAAGTGCCG
                      ____________________________________________________________
consensus GAGTCGACAGATTAAGGAAAGTGCCG
 
. : . : . : . : . : . :
JMSF018M08- TAGTGCTTCACTGGACACGTATTCTCTCCGTAGCTCTCTTTCAGGAGAGTTTTTCTGAGG
                      ____________________________________________________________
consensus TAGTGCTTCACTGGACACGTATTCTCTCCGTAGCTCTCTTTCAGGAGAGTTTTTCTGAGG
 
. : . : . : . : . : . :
JMSF018M08- ATTTTGTGCGAGAATTTGAAGGTTTTAATCACATCATGAATCGGCGAAACGATCCCAACC
JMFF011M16- ATCGGCGAAACGATCCCAATC
JMFN042C16- CATGAATCGGCGAAACGATCCCAACC
                      ____________________________________________________________
consensus ATTTTGTGCGAGAATTTGAAGGTTTTAATCACATCATGAATCGGCGAAACGATCCCAACC
 
. : . : . : . : . : . :
JMSF018M08- CTTTCGATGATGAAGAGCAAGAAGTCAATCCATTTTCGAATGGTGGTAATGCTCCAGGAT
JMFF011M16- CTTTTGACGATGAAGAGCAAGAAGTCAATCCATTTTCGAATGGTGGTAATGCTCCAGGAT
JMFN042C16- CTTTCGATGATGAAGAGCAAGAAGTCAATCCATTTTCGAATGGTGGTAATGCTCCAGGAT
                      ____________________________________________________________
consensus CTTTCGATGATGAAGAGCAAGAAGTCAATCCATTTTCGAATGGTGGTAATGCTCCAGGAT
 
. : . : . : . : . : . :
JMSF018M08- CAAAATCACGCATTCCTCAAATGGTTGCTAATACTCTTGGTTTTGGTCAGAAACATGATG
JMFF011M16- CAAAATCTCGCATTACTCAAATGGTGGCTAATACTCTTGGTTTTGGTCAAAAACATGATG
JMFN042C16- CAAAATCACGCATTCCTCAAATGGTTGCTAATACTCTTGGTTTTGGTCAGAAACATGATG
                      ____________________________________________________________
consensus CAAAATCACGCATTCCTCAAATGGTTGCTAATACTCTTGGTTTTGGTCAGAAACATGATG
 
. : . : . : . : . : . :
JMSF018M08- CCACTGTTGATATACCACTTGATTCACTGAATGACCCCAAGAAAAAACAGAAGGAACTGG
JMFF011M16- CCACTGTTGATATACCACTTGATTCGATGAATGATCCCAAGAAAAAACAGAAGGAACTGG
JMFN042C16- CCACTGTTGATATACCACTTGATTCACTGAATGACCCCAAGAAAAAACAGAAGGAACTGG
rJMFF011M16+ CAGAAGGAACTGG
                      ____________________________________________________________
consensus CCACTGTTGATATACCACTTGATTCACTGAATGACCCCAAGAAAAAACAGAAGGAACTGG
 
. : . : . : . : . : . :
JMSF018M08- CAGCTTGGGAAGCAGATTTGAAAAGGAGAGAAAGGGACATCAAGCGCCGAGAAGATGCTG
JMFF011M16- CAGCCTGGGAAGCAGATTTGAAAAGGAGAGAAATGGACATCAAACGCCGAGAAGATGCTG
JMFN042C16- CAGCTTGGGAAGCAGATTTGAAAAGGAGAGAAAGGGACATCAAGCGCCGAGAAGATGCTG
rJMFF011M16+ CAGCCTGGGAAGCAGATTTGAAAAGGAGAGAAATGGACATCAAACGCCGAGAAGATGCTG
                      ____________________________________________________________
consensus CAGCCTGGGAAGCAGATTTGAAAAGGAGAGAAATGGACATCAAACGCCGAGAAGATGCTG
 
. : . : . : . : . : . :
JMSF018M08- TTTCTGGAGCTGGTGTCCCCGTCAGTGATAAGAACTGGCCTCCTTTTTTCCCAATTATAC
JMFF011M16- TTGCTGGAGCTGGTGTCCCTGTCAGTGATAAGAATTGGCCTCCCTTTCTCCCAATTATAC
JMFN042C16- TTTCTGGAGCTGGTGTCCCCGTCAGTGATAAGAACTGGCCTCCTTTTTTCCCAATTATAC
rJMFF011M16+ TTGCTGGAGCTGGTGTCCCTGTCAGTGATAAGAATTGGCCTCCCTTTCTCCCAATTATAC
rJMSF018M08+ TTTCCCAATTATAC
rJMSF018L08+ CTGGAGCTGGTGTCCCCGTCAGTGATAAGAACTGGCCTCCTTTTTTCCCAATTATAC
                      ____________________________________________________________
consensus TTGCTGGAGCTGGTGTCCCCGTCAGTGATAAGAACTGGCCTCCTTTTTTCCCAATTATAC
 
. : . : . : . : . : . :
JMSF018M08- ACCATGATATAGTCNATGAAATACCAGTTGAATCTCA
JMFF011M16- ACCATGATATAGTCAATGAAATACCGGTTCAATCTCAGAAAATGCAGTACTTGGCTTTTG
JMFN042C16- ACCATGATATAGTCAATGAAATACCAGTTGAATCTCAGAAAATGCAGTACTTGGCTTTTG
rJMFF011M16+ ACCATGATATAGTCAATGAAATACCGGTTCAATCTCAGAAAATGCAGTACTTGGCTTTTG
rJMSF018M08+ ACCATGATATAGTCAATGAAATACCAGTTGAATCTCAGAAAATGCAGTACTTGGCTTTTG
rJMSF018L08+ ACCATGATATAGTCAATGAAATACCAGTTGAATCTCAGAAAATGCAGTACTTGGCTTTTG
                      ____________________________________________________________
consensus ACCATGATATAGTCAATGAAATACCAGTTGAATCTCAGAAAATGCAGTACTTGGCTTTTG
 
. : . : . : . : . : . :
JMFF011M16- CCAGTTGGTTAGGTATTGTTCTTTGCCTTGTATATAATATTGTTGCGGTGACTGTTTGTT
JMFN042C16- CCAGTTGGTTAGGTATTGTTCTTTGCCTTGTATATAATATTGTCGCAGTGACTGTTTGTT
rJMFF011M16+ CCAGTTGGTTAGGTATTGTTCTTTGCCTTGTATATAATATTGTTGCGGTGACTGTTTGTT
rJMSF018M08+ CCAGTTGGTTAGGTATTGTTCTTTGCCTTGTATATAATATTGTCGCAGTGACTGTTTGTT
rJMSF018L08+ CCAGTTGGTTAGGTATTGTTCTTTGCCTTGTATATAATATTGTCGCAGTGACTGTTTGTT
                      ____________________________________________________________
consensus CCAGTTGGTTAGGTATTGTTCTTTGCCTTGTATATAATATTGTCGCAGTGACTGTTTGTT
 
. : . : . : . : . : . :
JMFF011M16- GGAT
JMFN042C16- GGATAAAGGGTGACGGTGTCAAGATCTTTCTACTTGCAATAATATATGCATTAATGGG
rJMFF011M16+ GGATAAAGGGTGAAGGTGTCAAGATCTTTCTACTTGCTGTAATATATGCCTTAATGGGGT
rJMSF018M08+ GGATAAAGGGTGACGGTGTCAAGATCTTTCTACTTGCAATAATATATGCATTAATGGGGT
rJMSF018L08+ GGATAAAGGGTGACGGTGTCAAGATCTTTCTACTTGCAATAATATATGCATTAATGGGGT
                      ____________________________________________________________
consensus GGATAAAGGGTGACGGTGTCAAGATCTTTCTACTTGCAATAATATATGCATTAATGGGGT
 
. : . : . : . : . : . :
rJMFF011M16+ GCCCTCTATCCTATGTTCTGTGGTACAGGCCCCTTTATAATGCAATGAGGACTGACAGTG
rJMSF018M08+ GCCCCCTATCCTATGTTTTGTGGTACAGGCCCCTTTATAATGCAATGAGGACGAACAGTG
rJMSF018L08+ GCCCCCTATCCTATGTTTTGTGGTACAGGCCCCTTTATAATGCAATGAGGACGAACAGTG
rJMSF042K11+ TATGTTTTGTGGTACAGGCCCCTTTATAATGCAATGAGGACGAACAGTG
                      ____________________________________________________________
consensus GCCCCCTATCCTATGTTTTGTGGTACAGGCCCCTTTATAATGCAATGAGGACGAACAGTG
 
. : . : . : . : . : . :
rJMFF011M16+ CACTCAAGTTTGGTTGGTTTTTCTTGTTCTACTTGCTCCATATTGGATTTTGCATATTTG
rJMSF018M08+ CACTCAAATTTGGTTGGTTTTTCATGTTCTACTTGCTCCATATTGGATTTTGCATATTTG
rJMSF018L08+ CACTCAAATTTGGTTGGTTTTTCATGTTCTACTTGCTCCATATTGGATTTTGCATATTTG
rJMSF042K11+ CACTCAAATTTGGTTGGTTTTTCATGTTCTACTTGCTCCATATTGGATTTTGCATATTTG
                      ____________________________________________________________
consensus CACTCAAATTTGGTTGGTTTTTCATGTTCTACTTGCTCCATATTGGATTTTGCATATTTG
 
. : . : . : . : . : . :
rJMFF011M16+ CAGCTATAGCTCCTCCCATTGTCTTTAATGGAAAATCATTGACGGGCATCCTTGCTGCAA
rJMSF018M08+ CTGCTATAGCTCCTCCAATTATCTTTCATGGAAAATCATTGACGGGCATCCTTGCTGCAA
rJMSF018L08+ CTGCTATAGCTCCTCCAATTATCTTTCATGGAAAATCATTGACGGGCATCCTTGCTGCAA
rJMSF042K11+ CTGCTATAGCTCCTCCAATTATCTTTCATGGAAAATCATTGACGGGCATCCTTGCTGCAA
                      ____________________________________________________________
consensus CTGCTATAGCTCCTCCAATTATCTTTCATGGAAAATCATTGACGGGCATCCTTGCTGCAA
 
. : . : . : . : . : . :
rJMFF011M16+ TTGATGTCTTCTCTGATAATGTGTTGGTTGGG
rJMSF018M08+ TTGACGTCTTCTCTGATCACGTATTGGTTGGGGTAAGTTGCTGCAATTGACATCTTCCGA
rJMSF018L08+ TTGACGTCTTCTCTGATCACGTATTGGTTGGGGTAAGTTGCTGCAATTGACATCTTCCGA
rJMSF042K11+ TTGACGTCTTCTCTGATCACGTATTGGTTGGGGTAAGTTGCTGCAATTGACATCTTCCGA
                      ____________________________________________________________
consensus TTGACGTCTTCTCTGATCACGTATTGGTTGGGGTAAGTTGCTGCAATTGACATCTTCCGA
 
. : . : . : . : . : . :
rJMSF018M08+ GTAGCATATATATCTTCGATATCCATATTGTTTATTTGCAGATATTCTATCTGGTTGGAT
rJMSF018L08+ GTAGCATATATATCTTCGATATCCATATTGTTTATTTGCAGATATTCTATCTGGTTGGAT
rJMSF042K11+ GTAGCATATATATCTTCGATATCCATATTGTTTATTTGCAGATATTCTATCTGGTTGGAT
                      ____________________________________________________________
consensus GTAGCATATATATCTTCGATATCCATATTGTTTATTTGCAGATATTCTATCTGGTTGGAT
 
. : . : . : . : . : . :
rJMSF018M08+ TTGGCTTGTTTTGCTTAGAGGCATTGCTAAGCTTGTGGGTGCTTCAG
rJMSF018L08+ TTGGCTTGTTTTGCTTAGAGGCATTGCTAAGCTTGTGGGTGCTTCAG
rJMSF042K11+ TTGGCTTGTTTTGCTTAGAGGCATTGCTAAGCTTGTGGGTGCTTCAGGTTTGTGACTATA
                      ____________________________________________________________
consensus TTGGCTTGTTTTGCTTAGAGGCATTGCTAAGCTTGTGGGTGCTTCAGGTTTGTGACTATA
 
. : . : . : . : . : . :
rJMSF042K11+ AAAATGGACATTCACACACCGTTATGTTCAGTACATAGTGCATTTGACTGCATTCTTGTG
                      ____________________________________________________________
consensus AAAATGGACATTCACACACCGTTATGTTCAGTACATAGTGCATTTGACTGCATTCTTGTG
 
. : . : . : . : . : . :
rJMSF042K11+ AGAATGGGTGCTTGGATTGTGTGCAAAGTTTTCTTTCCTTCTCTTCTATAACTTATTTGC
                      ____________________________________________________________
consensus AGAATGGGTGCTTGGATTGTGTGCAAAGTTTTCTTTCCTTCTCTTCTATAACTTATTTGC
 
. : . : . : . : . : . :
rJMSF042K11+ AAACCCTATGTTTCAGAAGATGAAAGTCACGTGCATTTACATTACACTTTCATATCTGGC
                      ____________________________________________________________
consensus AAACCCTATGTTTCAGAAGATGAAAGTCACGTGCATTTACATTACACTTTCATATCTGGC
 
. : . : . : . : . : . :
rJMSF042K11+ TTGCTTAAACCTTTCACATTACCTTTTCCCTTGTGCAGAAAGTTTACATGTATTTCCGAG
                      ____________________________________________________________
consensus TTGCTTAAACCTTTCACATTACCTTTTCCCTTGTGCAGAAAGTTTACATGTATTTCCGAG
 
. : . : . : . : . : . :
rJMSF042K11+ GGCATAACCACAGGTAATCCAAGCTTTCGGTTCCTGATAATGATATTGTGTGGGTATGTG
                      ____________________________________________________________
consensus GGCATAACCACAGGTAATCCAAGCTTTCGGTTCCTGATAATGATATTGTGTGGGTATGTG
 
. : . : . : . : . : . :
rJMSF042K11+ AAGAAACAATATATCAAGGTGCCTCAGTATAGTCTGGTCTTATCTGATGTATTTGATTGA
                      ____________________________________________________________
consensus AAGAAACAATATATCAAGGTGCCTCAGTATAGTCTGGTCTTATCTGATGTATTTGATTGA
 
. : . : . : . : . : . :
rJMSF042K11+ GTTATACCTACAGTCTTGTGTTTGTTGGCAGCATATTTNGTATAAAAGTTGTCAATGGTT
                      ____________________________________________________________
consensus GTTATACCTACAGTCTTGTGTTTGTTGGCAGCATATTTNGTATAAAAGTTGTCAATGGTT