Contig 004359:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011P10Sequence226009506 (4)720004359 (5)ref|XP_011081192.1|5e-98PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic-like [Sesamum ind
JMSF041M22Sequence574004359 (5)gb|AFK37772.1|3e-48unknown [Lotus japonicus]
JMSF041N22Sequence762009506 (4)ref|XP_002284920.3|1e-45PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic isoform X1 [Vitis613004359 (5)ref|XP_011081192.1|9e-65PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic-like [Sesamum ind
JMSF042K19Sequence801009506 (4)ref|XP_002284920.3|3e-71PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic isoform X1 [Vitis729004359 (5)ref|XP_011081192.1|6e-98PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic-like [Sesamum ind
JMSF049F07Sequence708009506 (4)dbj|BAJ16226.1|9e-27sodium-dependent pyruvate transporter [Flaveria trinervia]777004359 (5)ref|XP_011081192.1|1e-109PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic-like [Sesamum ind

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF049F07+ GGNCAATGTAGCACTATCTGTTTTTATGACAACGTGT
                      ____________________________________________________________
consensus GGNCAATGTAGCACTATCTGTTTTTATGACAACGTGT
 
. : . : . : . : . : . :
rJMSF049F07+ TCAACTATTGGGGCTATTCTGATGACTCCACTACTGACTATGCTTTTGGCTGGTCAGCTT
rJMSF011P10+ TGATGACTCCACTACTGACTATGCTTTTGGCTGGTCAGCTT
rJMSF042K19+ TGATGACTCCACTACTGACTATGCTTTTGGCTGGTCAGCTT
                      ____________________________________________________________
consensus TCAACTATTGGGGCTATTCTGATGACTCCACTACTGACTATGCTTTTGGCTGGTCAGCTT
 
. : . : . : . : . : . :
rJMSF049F07+ GTCCCTGTTGATGCAGTGGGGCTTGCCATCAGCACATTCCAGGTTGTGTTAGTACCAACT
rJMSF011P10+ GTCCCTGTTGATGCAGTGGGGCTTGCCATCAGCACATTCCAGGTTGTGTTAGTACCAACT
rJMSF042K19+ GTCCCTGTTGATGCAGTGGGGCTTGCCATCAGCACATTCCAGGTTGTGTTAGTACCGACT
                      ____________________________________________________________
consensus GTCCCTGTTGATGCAGTGGGGCTTGCCATCAGCACATTCCAGGTTGTGTTAGTACCAACT
 
. : . : . : . : . : . :
rJMSF049F07+ ATTATTGGAGTGTTATCAAATGAGTATTTCCCCAAGTTCACATCCAAAATAATTACAGTT
rJMSF011P10+ ATTATTGGAGTGTTATCAAATGAGTATTTCCCCAAGTTCACATCCAAAATAATTACAGTT
rJMSF042K19+ ATTATTGGAGTGTTATCAAATGAGTATTTCCCCAAGTTCACATCCAAAATAATTACAGTT
rJMSF041N22+ AAATAATTACAGTT
                      ____________________________________________________________
consensus ATTATTGGAGTGTTATCAAATGAGTATTTCCCCAAGTTCACATCCAAAATAATTACAGTT
 
. : . : . : . : . : . :
rJMSF049F07+ ACCCCTCTAATTGGAGTTATATTGACAACTCTTCTCTGTGCAAGTCCAATCGGGCAAGTT
rJMSF011P10+ ACCCCTCTAATTGGAGTTATATTGACAACTCTTCTCTGTGCAAGTCCAATCGGGCAAGTT
rJMSF042K19+ ACCCCTCTAATTGGAGTTATATTGACAACTCTTCTCTGTGCAAGTCCAATCGGGCAAGTT
rJMSF041M22+ GACAACTCTCCTNTGTGCAAGTTCAATCGGNCAAGTN
rJMSF041N22+ ACCCCTCTAATTGGAGTTATATTGACAACTCTTCTCTGTGCAAGTCCAATCGGGCAAGTT
                      ____________________________________________________________
consensus ACCCCTCTAATTGGAGTTATATTGACAACTCTTCTCTGTGCAAGTCCAATCGGGCAAGTT
 
. : . : . : . : . : . :
rJMSF049F07+ GCAGATGTCTTGAAAACTCAGGGCGCACAACTACTCTTCCCAGTCGCCCTCTTACATGCT
rJMSF011P10+ GCAGATGTCTTGAAAACTCAGGGCGCACAACTACTCTTCCCAGTCGCCCTCTTACATGCT
rJMSF042K19+ GCAGATGTCTTGAAAACTCAGGGCGCACAACTACTCTTCCCAGTCGCCCTCTTACATGCT
rJMSF041M22+ GCAGATGTCTCGAAAACTCAGGGCGCACAACTACTCTTCCCAGTCGCCNTCNTACATGCT
rJMSF041N22+ GCAGATGTCTTGAAAACTCAGGGCGCACAACTACTCTTCCCAGTCGCCCTCTTACATGCT
                      ____________________________________________________________
consensus GCAGATGTCTTGAAAACTCAGGGCGCACAACTACTCTTCCCAGTCGCCCTCTTACATGCT
 
. : . : . : . : . : . :
rJMSF049F07+ GCCGCCTTTTTTCTTGGTTACTGGATCTCAAAGCTGTTTTTTGGCGAATCAACTTCCCGA
rJMSF011P10+ GCCGCCTTTTTTCTTGGTTACTGGATCTCAAAGCTGTTTTTTGGCGAATCAACCTCCCGA
rJMSF042K19+ GCCGCCTTTTTTCTTGGTTACTGGATCTCAAAGCTGTTTTTTGGCGAATCAACCTCCCGA
rJMSF041M22+ GCCGCCTTTTTTCTTGGNTACTGGATCTCAAAGCTGTTTTTTGGCGAATCAACCTCCCGA
rJMSF041N22+ GCCGCCTTTTTTCTTGGTTACTGGATCTCAAAGCTGTTTTTTGGCGAATCAACCTCCCGA
                      ____________________________________________________________
consensus GCCGCCTTTTTTCTTGGTTACTGGATCTCAAAGCTGTTTTTTGGCGAATCAACCTCCCGA
 
. : . : . : . : . : . :
rJMSF049F07+ ACCATTTCAATTGAATGCGGGATGCAGAGTTCTGCACTAGGATTTCTACTAGCACAAAAG
rJMSF011P10+ ACCATTTCAATTGAATGCGGGATGCAGAGTTCTGCACTAGGATTTCTACTAGCACAAAAG
rJMSF042K19+ ACCATTTCAATTGAATGCGGGATGCAGAGTTCTGCACTAGGATTTCTACTAGCACAAAAG
rJMSF041M22+ ACCATTTCAATTGAATGCGGGATGCAGAGTTCTGCNCTAGGATTTCTACTAGCACAAAAG
rJMSF041N22+ ACCATTTCAATTGAATGCGGGATGCAGAGTTCTGCACTAGGATTTCTACTAGCACAAAAG
                      ____________________________________________________________
consensus ACCATTTCAATTGAATGCGGGATGCAGAGTTCTGCACTAGGATTTCTACTAGCACAAAAG
 
. : . : . : . : . : . :
rJMSF049F07+ CACTTCAAAAACCCGCTAGTTGCTGTACCCTCTGCAGTGAGCGTTGTTTGCATGGCGCTC
rJMSF011P10+ CACTTCAAAAACCCGCTAGTTGCTGTACCCTCTGCAGTGAGCGTTGTTTGCATGGCGCTC
rJMSF042K19+ CACTTCAAAAACCCGCTAGTTGCTGTACCCTCTGCAGTGAGCGTTGTTTGCATGGCGCTC
rJMSF041M22+ CANTTCAAAAACCCGCTAGTTGCTGTACCCTNNGCAGTGAGCGTTGTTTGCATGGCGCTC
rJMSF041N22+ CACTTCAAAAACCCGCTAGTTGCTGTACCCTCTGCAGTGAGCGTTGTTTGCATGGCGCTC
                      ____________________________________________________________
consensus CACTTCAAAAACCCGCTAGTTGCTGTACCCTCTGCAGTGAGCGTTGTTTGCATGGCGCTC
 
. : . : . : . : . : . :
rJMSF049F07+ GGTGGAAGCGCCCTGGCCGTCTACTGGAGGAACCAGGCGATTCGCGTTGATGACAAGGAT
rJMSF011P10+ GGTGGAAGCGCCCTGGCCGTCTACTGGAGGAACCAGGCGATTCGCGTTGATGACAAGGAT
rJMSF042K19+ GGTGGAAGCGCCCTGGCCGTCTACTGGAGGAACCAGGCGATTCGCGTTGATGACAAGGAT
rJMSF041M22+ GGTGGAAGCGCCCTGGCCGTCTACCGGAGGAACCAGGCGATTCGCGTNGATGACAAGGAT
rJMSF041N22+ GGTGGAAGCGCCCTGGCCGTCTACTGGAGGAACCAGGCGATTCGCGTTGATGACAAGGAT
                      ____________________________________________________________
consensus GGTGGAAGCGCCCTGGCCGTCTACTGGAGGAACCAGGCGATTCGCGTTGATGACAAGGAT
 
. : . : . : . : . : . :
rJMSF049F07+ GACTTCAAGGAATAGAAGTCTGCTACTTCTCCTGTGTGTTTGTGTTTATCAAATCTTAGA
rJMSF011P10+ GACTTCAAGGAATAGAAGTCTGCTACTTCTCCTGTGTGTTTGTGTTTATCAAATCTTAGA
rJMSF042K19+ GACTTCAAGGAATAGAAGTCTGCTACTTCTCCTGTGTGTTTGTGTTTATCAAATCTTAGA
rJMSF041M22+ GACTTCAAGGAATAGAAGTCTGCTACTTCTCCTGTGTGTTNGTGTTTATCAAATCTTAGA
rJMSF041N22+ GACTTCAAGGAATAGAAGTCTGCTACTTCTCCTGTGTGTTTGTGTTTATCAAATCTTAGA
                      ____________________________________________________________
consensus GACTTCAAGGAATAGAAGTCTGCTACTTCTCCTGTGTGTTTGTGTTTATCAAATCTTAGA
 
. : . : . : . : . : . :
rJMSF049F07+ CTAGAGGATGAGTAGCTTGTCACTACATAGAGTGAGTAGTTAATTGGGTATATTATTGTT
rJMSF011P10+ CTAGAGGATGAGTAGCTTGTCACTACATAGAGTGAGTAGTTAATTGGGTATATTATTGTT
rJMSF042K19+ CTAGAGGATGAGTAGCTTGTCACTACATAGAGTGAGTAGTTAATTGGGTATATTATTGTT
rJMSF041M22+ CTAGAGGATGAGTAGCTTGTCACTACATAGAGTGAGTAGTTAATTGGGTATATTATTGTT
rJMSF041N22+ CTAGAGGATGAGTAGCTTGTCACTACATAGAGTGAGTAGTTAATTGGGTATATTATTGTT
                      ____________________________________________________________
consensus CTAGAGGATGAGTAGCTTGTCACTACATAGAGTGAGTAGTTAATTGGGTATATTATTGTT
 
. : . : . : . : . : . :
rJMSF049F07+ ACTAAATGTTTGTAGTTTATTTTTCACCAAATTTTAGAAGTTTTGGTATAATTGTTACCA
rJMSF011P10+ ACTAAATGTTTGTAGTTTATTTTTCACCAAATTTTAGAAGTTTTGGTATAATTGTTA-CA
rJMSF042K19+ ACTAAATGTTTGTAGTTTATTTTTCACCAAATTTTAGAAGTTTTGGTATAATTGTTA-CA
rJMSF041M22+ ACTAAATGTTCGTAGTTTATTTTTCACCAAATTTTAGAAGTTTTGGTATAATTGNTA-CA
rJMSF041N22+ ACTAAATGTTTGTAGTTTATTTTTCACCAAATTTTAGAAGTTTTGGTATAATTGTTA-CA
                      ____________________________________________________________
consensus ACTAAATGTTTGTAGTTTATTTTTCACCAAATTTTAGAAGTTTTGGTATAATTGTTA-CA
 
. : . : . : . : . : . :
rJMSF049F07+ AAGTGTGAATATTTAGATTT
rJMSF011P10+ AAGTGTGAATATTTAGATTT
rJMSF042K19+ AAGTGTGAATATTTAGATTTTTCCTGCCA
rJMSF041M22+ AAGTGTGAATATCTAGATTTTTCCTGCCAATAAGCCAAAACAAAATGAATNACAAAAG
rJMSF041N22+ AAGTGTGAATATTTAGATTTTTCCTGCCAATAAGCCAAAACAAAATGAATAACAAAAGTT
                      ____________________________________________________________
consensus AAGTGTGAATATTTAGATTTTTCCTGCCAATAAGCCAAAACAAAATGAATAACAAAAGTT