Contig 004357:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF026A07+          CAGTAGTAGTAATTCTTTGGAGAAATAGACCAAATGAGTTAAAAGCTTTCCAACTCTATG
                      ____________________________________________________________
consensus             CAGTAGTAGTAATTCTTTGGAGAAATAGACCAAATGAGTTAAAAGCTTTCCAACTCTATG
 
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rJMSF026A07+          GGTTACTGCTTCTCTAGACCTGCTGTCCATGATATGGGCTGGGTACATCTTNGTGTGATT
                      ____________________________________________________________
consensus             GGTTACTGCTTCTCTAGACCTGCTGTCCATGATATGGGCTGGGTACATCTTNGTGTGATT
 
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rJMSF026A07+          TCATAGTAAATGAGTTGAATGAATTACAGAGCACCCAAGATTCTGATTAATTATTTGGTC
                      ____________________________________________________________
consensus             TCATAGTAAATGAGTTGAATGAATTACAGAGCACCCAAGATTCTGATTAATTATTTGGTC
 
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rJMSF026A07+          AATGCTAATGAACTTGATCTACATTAAAATGTCTACCATTTCATTATTTTAGCTTTATTT
rJMFF038F22+                                                TTTCATTATTTTAGCTTTATTT
                      ____________________________________________________________
consensus             AATGCTAATGAACTTGATCTACATTAAAATGTCTACCATTTCATTATTTTAGCTTTATTT
 
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rJMSF026A07+          GAAGAAAGTTAATATGTGGTGACATTTGCAGTATTTGGTTTACTTCTTTCATATGTTGGG
rJMFF038F22+          GAAGAAAGTTAATATGNGGTGACATTTGNGGTATTTGGTTTACTTCTTTCATATGNTGGG
                      ____________________________________________________________
consensus             GAAGAAAGTTAATATGTGGTGACATTTGCGGTATTTGGTTTACTTCTTTCATATGTTGGG
 
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rJMSF026A07+          GTTCTCAGAAGTTCACCTCATTTACTGGAATTTCTTTTGAGTTTAGCAAAATACTGGATT
rJMFF038F22+          GTTCTCAGAAGTTCACCTCATTTACTGGAATTTCTTTTGAGTTTAGCAAAATATTGGATT
                      ____________________________________________________________
consensus             GTTCTCAGAAGTTCACCTCATTTACTGGAATTTCTTTTGAGTTTAGCAAAATATTGGATT
 
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rJMSF026A07+          GTTTGGTTTGTTTTGCACTTACTCTGGTCAATTTGTGATCCTCCATATAGAAGTCAGATT
rJMFF038F22+          GTTTGGTTTGTTTTGCACTTACTTTGTAGTATTTGTGATCCTCCATATAGAAGTCAGATT
rJMSF041J20+                                                    CCATATAGAAGTCAGATT
                      ____________________________________________________________
consensus             GTTTGGTTTGTTTTGCACTTACTTTGTTGTATTTGTGATCCTCCATATAGAAGTCAGATT
 
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rJMSF026A07+          TCCAATTGGAGTGTTGCCCCATAAATTGGTGTTGAGCTGTTTGCATTTGCTAAAAATGAT
rJMFF038F22+          TCCAATTGGAGNGTTGCCCTATAAATTGGTGTTGAGCTGTTTGCATTTGCTGAAAATGAT
rJMSF041J20+          TCCAATTGGAGTGTTGCCCTATAAATTGGTGTTGAGCNGTTTGCATTTGCTGAAAATGAT
                      ____________________________________________________________
consensus             TCCAATTGGAGTGTTGCCCTATAAATTGGTGTTGAGCTGTTTGCATTTGCTGAAAATGAT
 
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rJMSF026A07+          TATAGCTTTTTATATTTCAGAATTTTATTGTGATCACTAATGCATGCCAGAAAAATTCCG
rJMFF038F22+          TATAGCTTTTCATATTTCAGAATTTTATTGTGATCNCTAATGCATGCCTG-AAAATTCCG
rJMSF041J20+          TATAGCTTTTCATATTTCAGAATTTTATTGTGATCNCTAATGCNTGCCTG-AAAATTCCG
                      ____________________________________________________________
consensus             TATAGCTTTTCATATTTCAGAATTTTATTGTGATCACTAATGCATGCCTG-AAAATTCCG
 
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rJMSF026A07+          AGATTGCCAATTTCAGCATCTTGAGATTGCCTTATAATTTGCTTGTTTTATCCTGAATGC
rJMFF038F22+          AGATTGCCAATTTCAGCATNTTGAGATTGCCTTATAATTTGCTTGTTTTATCCTGAATGC
rJMSF041J20+          AGATTGCCAATTTCAGCATCTTGAGATTGCCTTATAATTTGCTTGTTTTATCCTGAATGC
                      ____________________________________________________________
consensus             AGATTGCCAATTTCAGCATCTTGAGATTGCCTTATAATTTGCTTGTTTTATCCTGAATGC
 
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rJMSF026A07+          ATGCGCATAATTTGCTCGTTTTGTAAAATAACAGAGTACTGATGCCCAGAAGGCACAAGC
rJMFF038F22+          ATGTGCATAATTTGCTNGTTTTGTAAAATAACAGAGTNCTGATGCCCAGAAGGCNCAAGC
rJMSF041J20+          ATGNGCNTAATTTGCTCGTTTTGTAAAATAACNGNGTACTGATGCCCNGAAGGCNCNAGC
                      ____________________________________________________________
consensus             ATGTGCATAATTTGCTCGTTTTGTAAAATAACAGAGTACTGATGCCCAGAAGGCACAAGC
 
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rJMSF026A07+          ACTCAGTTTGCCTGAAG                                           
rJMFF038F22+          NCTCAGTTTGCCTGAAGNTAACNCGTNTCAATATATTCATGCCTCAGAATGAAACTTGTT
rJMSF041J20+          NCTCAGTTTGCCTGAAGNTAACNCGTCTCNANATATTCNTGCCTCNGAATGAAACTTGTT
                      ____________________________________________________________
consensus             ACTCAGTTTGCCTGAAGNTAACNCGTCTCAATATATTCATGCCTCAGAATGAAACTTGTT
 
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rJMFF038F22+          GGACCAAGTTTAACTGTTGCTCCAGTTGAATTTGAGTTGGAGTTTGATTATAGTATTTGG
rJMSF041J20+          GGNCCAAGTCTAACTGTTGCTCCNGTTGAATNTGAGTTGGAGTTTGATTATAGTATTTGG
                      ____________________________________________________________
consensus             GGACCAAGTTTAACTGTTGCTCCAGTTGAATTTGAGTTGGAGTTTGATTATAGTATTTGG
 
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rJMFF038F22+          AGAATGAAACTTGAAGATGATTTGATTTTATTGCATGTTCCCGGGTTTTNTTTTTTAAAA
rJMSF041J20+          NGAATGAAACTTGAAGNTGATTTGATNTTATTGCATGTTCCCGGGTTTTCTTTNTTAAAA
                      ____________________________________________________________
consensus             AGAATGAAACTTGAAGATGATTTGATTTTATTGCATGTTCCCGGGTTTTCTTTTTTAAAA
 
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rJMFF038F22+          GAAAAGAAAAAAAAAACGCTCTGCTCTAATTGAACTAGTTGGCTGTATGTATAAGATATA
rJMSF041J20+          GAAAAGAAAAAAAAAACGCTCTGCTCTAATTGAACTAGTTGGCTGTATGTATAAGATATA
                      ____________________________________________________________
consensus             GAAAAGAAAAAAAAAACGCTCTGCTCTAATTGAACTAGTTGGCTGTATGTATAAGATATA
 
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rJMFF038F22+          TGCGGTTTTGTTTTATTCTTGCAATGATAACTG                           
rJMSF041J20+          TGCGGTTTTGTTTTATTCTTGCAATGATAACTGACTGGCACAACTTTTACGAAGCATCAC
                      ____________________________________________________________
consensus             TGCGGTTTTGTTTTATTCTTGCAATGATAACTGACTGGCACAACTTTTACGAAGCATCAC
 
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rJMSF041J20+          AATATTTGTTGTGCACTGATAACATTGAATTTGGTGAGGTGATAATTGCTTGTGGTGCCG
                      ____________________________________________________________
consensus             AATATTTGTTGTGCACTGATAACATTGAATTTGGTGAGGTGATAATTGCTTGTGGTGCCG