| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002H23 | Sequence | 445 | 012808 (8) | ref|NP_001275397.1| | 3e-31 | glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform [Solanum tuberosum] gb | 134 | 004352 (6) | |||
| JMFF021L10 | Sequence | 497 | 012808 (8) | sp|P37830.1|G6PD_SOLTU | 1e-52 | RecName: Full=Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform; Short=G | 609 | 004352 (6) | ref|XP_006852171.1| | 6e-68 | hypothetical protein AMTR_s00049p00097260 [Amborella trichopoda] gb|ERN13638.1| |
| JMFF038J20 | Sequence | 173 | 004352 (6) | ||||||||
| JMSF009B22 | Sequence | 315 | 012808 (8) | ref|NP_001275397.1| | 2e-20 | glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform [Solanum tuberosum] gb | 767 | 004352 (6) | ref|XP_006852171.1| | 4e-109 | hypothetical protein AMTR_s00049p00097260 [Amborella trichopoda] gb|ERN13638.1| |
| JMSF018L23 | Sequence | 191 | 012808 (8) | 704 | 004352 (6) | ref|XP_006852171.1| | 5e-85 | hypothetical protein AMTR_s00049p00097260 [Amborella trichopoda] gb|ERN13638.1| | |||
| JMSF040I11 | Sequence | 707 | 012808 (8) | ref|XP_006338664.1| | 6e-103 | PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform-like isofor | 872 | 004352 (6) | ref|XP_006852171.1| | 1e-110 | hypothetical protein AMTR_s00049p00097260 [Amborella trichopoda] gb|ERN13638.1| |
This contig is upended
. : . : . : . : . : . :
rJMSF040I11+ GAGGTTGTGCTTGGACAATACGAGGGCTATAG
____________________________________________________________
consensus GAGGTTGTGCTTGGACAATACGAGGGCTATAG
. : . : . : . : . : . :
rJMSF040I11+ GGATGATCCAACAGTTCCTGACAACTCAAATACTCCAACATTTGCAACAGTGGTTTCTGC
____________________________________________________________
consensus GGATGATCCAACAGTTCCTGACAACTCAAATACTCCAACATTTGCAACAGTGGTTTCTGC
. : . : . : . : . : . :
rJMSF009B22+ CACAATGAAAGATGGGAAGGTGTACCCTTTATACTCAAGGCAGGAAAAGCACTGA
rJMSF040I11+ GTGTGCACAATGAAAGATGGGAAGGTGTACCCTTTATACTCAAGGCAGGAAAAGCACTGA
____________________________________________________________
consensus GTGTGCACAATGAAAGATGGGAAGGTGTACCCTTTATACTCAAGGCAGGAAAAGCACTGA
. : . : . : . : . : . :
rJMSF009B22+ ATTCTAGAAAGGCAGAAATACGTATCCAATTTAAGGAAGTTCCTGGTGATATATTCAGAT
rJMSF018L23+ AGAAAGGCAGAAATNCGTATCCAATTTAAGGAAGTTCCTGGTGATATATTCAGAT
rJMSF040I11+ ATTCTAGAAAGGCAGAAATACGTATCCAATTTAAGGAAGTTCCTGGTGATATATTCAGAT
____________________________________________________________
consensus ATTCTAGAAAGGCAGAAATACGTATCCAATTTAAGGAAGTTCCTGGTGATATATTCAGAT
. : . : . : . : . : . :
rJMSF009B22+ GTCAAAAGCAAGGGAGGAACGAATTTGTTATACGTCTTCAGCCTTCTGAAGCAATGTACA
rJMSF018L23+ GTCAAAAGCAAGGGAGGAACGAATTTGTTATACGTCTTCAGCCTTCTGAAGCAATGTACA
rJMFF021L10+ CTGAAGCAATGTACA
rJMSF040I11+ GTCAAAAGCAAGGGAGGAACGAATTTGTTATACGTCTTCAGCCTTCTGAAGCAATGTACA
____________________________________________________________
consensus GTCAAAAGCAAGGGAGGAACGAATTTGTTATACGTCTTCAGCCTTCTGAAGCAATGTACA
. : . : . : . : . : . :
rJMSF009B22+ TGAAACTCACGGTGAAGCAACCTGGACTGGAAATGTCAACGGTTCAGAGCGAACTAGACT
rJMSF018L23+ TGAAACTCACGGNGAAGCAACCTGGACTGGAAATGTCAACGGTTCAGAGCGANCTAGACT
rJMFF021L10+ TGAAACTCACGGTGAAGCAACCTGGACTGGAAATGTCAACGGTTCAGAGCGAACTAGACT
rJMSF040I11+ TGAAACTCACGGTGAAGCAACCTGGACTGGAAATGTCAACGGTTCAGAGCGAACTAGACT
____________________________________________________________
consensus TGAAACTCACGGTGAAGCAACCTGGACTGGAAATGTCAACGGTTCAGAGCGAACTAGACT
. : . : . : . : . : . :
rJMSF009B22+ TGTCGTATAGGCAACGTTATCAAGGGGTTACCATTCCAGAGGCTTATGAGCGTCTAATAC
rJMSF018L23+ TGTCGTATAGGCAACGTTATCAAGGGGTTACCATTCCAGAGGCTTATGAGCGTCTAATAC
rJMFF021L10+ TGTCGTATAGGCAACGTTATCAAGGGGTTACCATTCCAGAGGCTTATGAGCGTCTAATAC
rJMSF040I11+ TGTCGTATAGGCAACGTTATCAAGGGGTTACCATTCCAGAGGCTTATGAGCGTCTAATAC
____________________________________________________________
consensus TGTCGTATAGGCAACGTTATCAAGGGGTTACCATTCCAGAGGCTTATGAGCGTCTAATAC
. : . : . : . : . : . :
rJMSF009B22+ TGGACACAATAAGGGGGGATCAGCAGCATTTTGTTCGTAGGGATGAACTGAAGGTGGCAT
rJMSF018L23+ TGGACACAATAAGGGGGGATCAGCNGCNTTTTNTTNGTAGGGATGANCTGAAGGTGGCNT
rJMFF021L10+ TGGACACAATAAGGGGGGATCAGCAGCATTTTGTTCGTAGGGATGAACTGAAGGTGGCAT
rJMSF040I11+ TGGACACAATAAGGGGGGATCAGCAGCATTTTGTTCGTAGGGATGAACTGAAGGTGGCAT
____________________________________________________________
consensus TGGACACAATAAGGGGGGATCAGCAGCATTTTGTTCGTAGGGATGAACTGAAGGTGGCAT
. : . : . : . : . : . :
rJMSF009B22+ GGGAGATATTCACCCCGCTATTGCACAGGATAGATGATGGAGAGTTTAAGTCAATAGCTT
rJMSF018L23+ GGGAGATATTCACCCCGCTATTGCACNGGATAGATGATGGAGAGTTTAAGTCAATAGCTT
rJMFF021L10+ GGGAGATATTCACCCCGCTATTGCACAGGATAGATGATGGAGAGTTTAAGTCAATAGCTT
rJMSF040I11+ GGGAGATATTCACCCCGCTATTGCACAGGATAGATGATGGAGAGTTTAAGTCAATAGCTT
____________________________________________________________
consensus GGGAGATATTCACCCCGCTATTGCACAGGATAGATGATGGAGAGTTTAAGTCAATAGCTT
. : . : . : . : . : . :
rJMSF009B22+ ACAAGGCAGGCAGCCGAGGCCCTGGGGAAGCAGATGATTTGTTAAAAAGGGTGGGGTATG
rJMSF018L23+ ACAAGGCAGGCAGCCGAGGCCCTGGGGAAGCAGATGATTTGTTAAAAAGGGTGGGGTATG
rJMFF021L10+ ACAAGGCAGGCAGCCGAGGCCCTGGGGAAGCAGATGATTTGTTAAAAAGGGTGGGGTATG
rJMSF040I11+ ACAAGGCAGGCAGCCGAGGCCCTGGGGAAGCAGATGATTTGTTAAAAAGGGTGGGGTATG
____________________________________________________________
consensus ACAAGGCAGGCAGCCGAGGCCCTGGGGAAGCAGATGATTTGTTAAAAAGGGTGGGGTATG
. : . : . : . : . : . :
rJMSF009B22+ TTCAAACACATGGATATATATGGATCCCTCCGACCTTATAATATTACAACTTAACAAAGT
rJMSF018L23+ TTCAAACACATGGATATATATGGATCCCTCCGACCTTATAATATTACAACTTAACAAAGT
rJMFF021L10+ TTCAAACACATGGATATATATGGATCCCTCCGACCTTATAATATTACAACTTAACAAAGT
rJMSF040I11+ TTCAAACACATGGATATATATGGATCCCTCCGACCTTATAATATTACAACTTAACAAAGT
____________________________________________________________
consensus TTCAAACACATGGATATATATGGATCCCTCCGACCTTATAATATTACAACTTAACAAAGT
. : . : . : . : . : . :
rJMSF009B22+ GATGAAGCGAAGATGGAGTACTATATGTGCGGCATATATATATGCATGCATGTTTGTTCC
rJMSF018L23+ GNTGAAGCGAAGATGGAGTNCNATATGTGCGGCATATATATATGCATGCNTGTTTGTTCC
rJMFF021L10+ GATGAAGCGAAGATGGAGTACTATATGTGCGGCATATATATATGCATGCATGTTTGTTCC
rJMSF040I11+ GATGAAGCGAAGATGGAGTACTATATGTGCGGCATATATATATGCATGCATGTTTGTTCC
____________________________________________________________
consensus GATGAAGCGAAGATGGAGTACTATATGTGCGGCATATATATATGCATGCATGTTTGTTCC
. : . : . : . : . : . :
rJMSF009B22+ AGATACAGATAGATACCCAAAACTTGGGGTGCGGTTTGTTTCAGAATAAGTAATACCCCC
rJMSF018L23+ AGATACAGATAGATACCCAAAACTTGGGGTGCGGTNTGTTTCAGANTAAGTAATACCCCC
rJMFF021L10+ AGATACAGATAGATACCCAAAACTTGGGGTGCGGTTTGTTTCAGAATAAGTAATACCCCC
rJMFF038J20+ CAGATAGATACCCAAGNCTTGGGGTGCGGTTTGTTTCAGAATAAGTAATACCCCC
rJMFF002H23+ TGGGGTGCGGTTTGTTTCAGAATAAGTAATACCCCC
rJMSF040I11+ AGATACAGATAGATACCCAAAACTTGGGGTGCGGTTTGTTTCAGAATAAGTAATACCCCC
____________________________________________________________
consensus AGATACAGATAGATACCCAAAACTTGGGGTGCGGTTTGTTTCAGAATAAGTAATACCCCC
. : . : . : . : . : . :
rJMSF009B22+ ACGGGCTGTAAAATTGTAATGGATTACTATACATATGATAATAATCCTCATATCGATCAG
rJMSF018L23+ ACGGGCTGTAAAATTGTAATGGATTACNATACATATGATAATAATCCTCATATCGATCAG
rJMFF021L10+ ACGGGCTGTAAAATTGTAATGGATTACTATACATATGATAATAATCCTCATATCGATCAG
rJMFF038J20+ ACGGGCTGTAAAATNGTAATGGATTACTATACATATGATAATAATCCTCATATCGATCAN
rJMFF002H23+ ACGGGCTGTAAAATTGTAATGGATTANTATACATATGATAATAATCCTCATATCGATCAG
rJMSF040I11+ ACGGGCTGTAAAATTGTAATGGATTACTATACATATGATAATAATCCTCATATCGATCAG
____________________________________________________________
consensus ACGGGCTGTAAAATTGTAATGGATTACTATACATATGATAATAATCCTCATATCGATCAG
. : . : . : . : . : . :
rJMSF009B22+ CTGGCTGGTAGGGTATACCTATACATACTATGATTCATGTATATGTACGT
rJMSF018L23+ CTGGCTGGTAGGGTATAC
rJMFF021L10+ CTGGCTGGTAGGGTATACCTATACATACTATGATTCATGTATATGTACGT
rJMFF038J20+ CTGGCTGGTAGGGTATACCTATACATACTATGATTCATGTATATGTACGT
rJMFF002H23+ CTGGTTGGTAGGGTATACCTATACATACTATGATTC
rJMSF040I11+ CTGGCTGGTAGGGTATACCTATACATACTATGATTCATGTATATGTACGTTTCATATATA
____________________________________________________________
consensus CTGGCTGGTAGGGTATACCTATACATACTATGATTCATGTATATGTACGTTTCATATATA