Contig 004351:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040G24+                                                    GTCGAAGAAGAAAGGGAA
                      ____________________________________________________________
consensus                                                       GTCGAAGAAGAAAGGGAA
 
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rJMSF040G24+          AAAGCCCCCNTACCGGGATTAATGGCAAAAACCTAGACAATTAGATGGTGACGAAGATTG
                      ____________________________________________________________
consensus             AAAGCCCCCNTACCGGGATTAATGGCAAAAACCTAGACAATTAGATGGTGACGAAGATTG
 
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rJMSF030D09+                TCCTCCACCTTGGGATGTGTCCTTGGGTGGTGATGGATGCCCTAAGTTCCTATG
rJMSF040G24+          GCAAGGTCCTCCACCTTGGGATGTGTCCTTGGGTGGTGATGGATGCCCTAAGTTCCTATG
                      ____________________________________________________________
consensus             GCAAGGTCCTCCACCTTGGGATGTGTCCTTGGGTGGTGATGGATGCCCTAAGTTCCTATG
 
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rJMSF030D09+          CGATGTGATGGTGGAAGGATTGGCAAAACATTTAAGGTGTGTTGGCATTGATGCTGCTGT
rJMSF040G24+          CGATGTGATGGTGGAAGGATTGGCAAAACATTTAAGGTGTGTTGGCATTGATGCTGCTGT
                      ____________________________________________________________
consensus             CGATGTGATGGTGGAAGGATTGGCAAAACATTTAAGGTGTGTTGGCATTGATGCTGCTGT
 
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rJMSF030D09+          TCCCCCTCTGAGAAAGCCTCAAACAAGGGATTTAATTGAACAAGCATCTAAGGAGAAAAG
rJMSF040G24+          TCCCCCTCTGAGAAAGCCTCAAACAAGGGATTTAATTGAACAAGCATCTAAGGAGAAAAG
                      ____________________________________________________________
consensus             TCCCCCTCTGAGAAAGCCTCAAACAAGGGATTTAATTGAACAAGCATCTAAGGAGAAAAG
 
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rJMSF030D09+          GGTACTAGTAACACGAGATGCCAAACTTCTGAGGCATGGCTATCTCATAAAAAATCAAAT
rJMSF040G24+          GGTACTAGTAACACGAGATGCCAAACTTCTGAGGCATGGCTATCTCATAAAAAATCAAAT
                      ____________________________________________________________
consensus             GGTACTAGTAACACGAGATGCCAAACTTCTGAGGCATGGCTATCTCATAAAAAATCAAAT
 
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rJMSF030D09+          ATACAGGGTGAAGAGTCTTCTTAAAAATGAACAACTTATTGAGGTGATAGAAACATTTAA
rJMSF040G24+          ATACAGGGTGAAGAGTCTTCTTAAAAATGAACAACTTATTGAGGTGATAGAAACATTTAA
                      ____________________________________________________________
consensus             ATACAGGGTGAAGAGTCTTCTTAAAAATGAACAACTTATTGAGGTGATAGAAACATTTAA
 
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rJMSF030D09+          ATTGGAAATTTCTGAGGATCAGCTGATGTCTAGGTGCACTAAATGCAATGGGAGATTCAT
rJMSF040G24+          ATTGGAAATTTCTGAGGATCAGCTGATGTCTAGGTGCACTAAATGCAATGGGAGATTCAT
                      ____________________________________________________________
consensus             ATTGGAAATTTCTGAGGATCAGCTGATGTCTAGGTGCACTAAATGCAATGGGAGATTCAT
 
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rJMSF030D09+          CCAGAAACCTCTGACAACTGAAGAGGCTGTTGAAGCTGGCAAGGGCTTTCAGGTGATTCC
rJMSF040G24+          CCAGAAACCTCTGACAACTGAAGAGGCTGTTGAAGCTGGCAAGGGCTTTCAGGTGATTCC
                      ____________________________________________________________
consensus             CCAGAAACCTCTGACAACTGAAGAGGCTGTTGAAGCTGGCAAGGGCTTTCAGGTGATTCC
 
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rJMSF030D09+          AAACTGCCTGTTTGACAAGAACTTGGAGTTCTGGCAGTGCATGGACTGTAAACAACTTTA
rJMSF040G24+          AAACTGCCTGTTTGACAAGAACTTGGAGTTCTGGCAGTGCATGGACTGTAAACAACTTTA
                      ____________________________________________________________
consensus             AAACTGCCTGTTTGACAAGAACTTGGAGTTCTGGCAGTGCATGGACTGTAAACAACTTTA
 
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rJMSF030D09+          CTGGGAGGGAACCCAGTACCGCAATGCAGTACAAAAGTTCATTGACATTTGCAAGCTAAA
rJMSF040G24+          CTGGGAGGGAACCCAGTACCGCAATGCAGTACAAAAGTTCATTGACATTTGCAAGCTAAA
                      ____________________________________________________________
consensus             CTGGGAGGGAACCCAGTACCGCAATGCAGTACAAAAGTTCATTGACATTTGCAAGCTAAA
 
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rJMSF030D09+          CGAGTAAGAGAAGGGCCACAATGCTTCCTAATCAATTGCCTACCACAAAGTCACATACCC
rJMSF040G24+          CGAGTAAGAGAAGGGCCACAATGCTTCCTAATCAATTGCCTACCACAAAGTCACATACCC
                      ____________________________________________________________
consensus             CGAGTAAGAGAAGGGCCACAATGCTTCCTAATCAATTGCCTACCACAAAGTCACATACCC
 
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rJMSF030D09+          TAAGCTGTCACATTTTGCTTTGTAATATAGTTGCCCCTAGTTCTCCAATATGTCTCCCCC
rJMSF040G24+          TAAGCTGTCACATTTTGCTTTGTAATATAGTTGCCCCTAGTTCTCCAATATGTCTCCCCC
                      ____________________________________________________________
consensus             TAAGCTGTCACATTTTGCTTTGTAATATAGTTGCCCCTAGTTCTCCAATATGTCTCCCCC
 
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rJMSF030D09+          TCGTGGGATTCCTGTCTAACTCGAAGAATTCCACCATCAATTGGTGGTTGTGCATGCCCT
rJMSF040G24+          TCGTGGGATTCCTGTCTAACTCGAAGAATTCCACCATCAATTGGTGGTTGTGCATGCCCT
                      ____________________________________________________________
consensus             TCGTGGGATTCCTGTCTAACTCGAAGAATTCCACCATCAATTGGTGGTTGTGCATGCCCT
 
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rJMSF030D09+          CGTACTAGCTTTGACAAATCTGTTTGTATCAATCCCGGGAATTTTGTTTTGTAC      
rJMSF040G24+          CGTACTAGCTTTGACAAATCTGTTTGTATCAATCCCGGGAATTTTGTTTTGTACTGTGTG
                      ____________________________________________________________
consensus             CGTACTAGCTTTGACAAATCTGTTTGTATCAATCCCGGGAATTTTGTTTTGTACTGTGTG