Contig 004349:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015B01Sequence510006654 (2)ref|XP_009791699.1|6e-25PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Nicotiana sylvestris]630004349 (2)gb|AIU50073.1|3e-4415-cis-zeta-carotene isomerase, partial [Prunus persica]
JMSF040D15Sequence668006654 (2)ref|XP_009791699.1|1e-35PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic [Nicotiana sylvestris]405004349 (2)gb|AIU50073.1|5e-0815-cis-zeta-carotene isomerase, partial [Prunus persica]

Alignment

This contig is upended


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rJMSF015B01+ CCAAAGATGCATNTTTGGGAAACTGGGATCATGNGAATTN
                      ____________________________________________________________
consensus CCAAAGATGCATNTTTGGGAAACTGGGATCATGNGAATTN
 
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rJMSF015B01+ CTNGGCACCCCCNGATGGTNGGGCNGGTGANGTGGTGCCNTGCTCACCCTNTATGGNTTG
                      ____________________________________________________________
consensus CTNGGCACCCCCNGATGGTNGGGCNGGTGANGTGGTGCCNTGCTCACCCTNTATGGNTTG
 
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rJMSF015B01+ GGAACTNGGNTGCTGTGGNGGCNTCCNTGGGTTTGATAGGNCCCCNTTTGTTTGGAGCCN
                      ____________________________________________________________
consensus GGAACTNGGNTGCTGTGGNGGCNTCCNTGGGTTTGATAGGNCCCCNTTTGTTTGGAGCCN
 
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rJMSF015B01+ GGAANGGGGNCCGGNGGNTGGGAATNCGATATGGGGNGGCTTTTGAAGCTGTGAAGAATA
                      ____________________________________________________________
consensus GGAANGGGGNCCGGNGGNTGGGAATNCGATATGGGGNGGCTTTTGAAGCTGTGAAGAATA
 
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rJMSF015B01+ GAACNAGCNTCNTTCCNTTTGCNGCAATTGTAGATGGTNNCCCGAAGTTGCCNAAAGNTT
rJMSF040D15+ ATTGTAGATGGTNNCCNGAAGTTGCCNAAAGNTT
                      ____________________________________________________________
consensus GAACNAGCNTCNTTCCNTTTGCNGCAATTGTAGATGGTNNCCCGAAGTTGCCNAAAGNTT
 
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rJMSF015B01+ NTTNCAAAGAATTTGTTAGNTTGCCNTACTTGTCCNTAACNGTATTGNCCTTAGGNGCCT
rJMSF040D15+ NTTNCAAAGAATTTGTTAGNTTGCCNTACTTGTCCNTAACNGTNTTGNCCTTNGGNGCCT
                      ____________________________________________________________
consensus NTTNCAAAGAATTTGTTAGNTTGCCNTACTTGTCCNTAACNGTATTGNCCTTAGGNGCCT
 
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rJMSF015B01+ ACTTTGCCCNCCCNCTCNTGCNGGNTGCNGGNTTCNGGNTTCNCTGGTAGTTCAACNTNT
rJMSF040D15+ NCTTTGCCCNCCCCCTCNTGCNGGNTGCNGGGTTCNGGNTTCNCTGGTAGTTCAACNTNT
                      ____________________________________________________________
consensus ACTTTGCCCNCCCCCTCNTGCNGGNTGCNGGGTTCNGGNTTCNCTGGTAGTTCAACNTNT
 
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rJMSF015B01+ CNCTTTTGNTCCNTGTAAAAATAAAAATAANGTAATNTTTTTCNCCCNTGGGGNGTAGAT
rJMSF040D15+ CNCTTTTGNTCCNNGTAAAAATAAAAATAANGTAATNTTTTTCNCCCNTGGGGNGTAGAT
                      ____________________________________________________________
consensus CNCTTTTGNTCCNTGTAAAAATAAAAATAANGTAATNTTTTTCNCCCNTGGGGNGTAGAT
 
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rJMSF015B01+ GAGGCGGTGCGGGTGCGGGGTGCCGGTNTNTTCAAGTTTAACCNAAGGNATATAGGGTTT
rJMSF040D15+ GAGGCGGNGCGGGTGCGGGGTGCCGGTNTTTTCAAGNTTAACCNAAGGNATATAGGGNTT
                      ____________________________________________________________
consensus GAGGCGGTGCGGGTGCGGGGTGCCGGTNTTTTCAAGTTTAACCNAAGGNATATAGGGTTT
 
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rJMSF015B01+ AGCNTATCCNGNCTAAGGAAACTTGTGGTCCGNCAAAAAAAAAAAGTGAAATACTTCCCA
rJMSF040D15+ AGCNTATCCNGNCTAAGGNAACTTGNGGTCCGNCAAAAAAAAAAAGTGAAATACTTCCCA
                      ____________________________________________________________
consensus AGCNTATCCNGNCTAAGGAAACTTGTGGTCCGNCAAAAAAAAAAAGTGAAATACTTCCCA
 
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rJMSF015B01+ TTGCATTTATGCCCGGCTTTAAGAAGCTGGTCTAACCATATTTCATACAG
rJMSF040D15+ TTGCATTTATGCCCGGCTTTAAGAAGCTGGTCTAACCATATTTCATACAGTATAAATAAT
                      ____________________________________________________________
consensus TTGCATTTATGCCCGGCTTTAAGAAGCTGGTCTAACCATATTTCATACAGTATAAATAAT