Contig 004348:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040B24+                                                        AAACGAGAAGCCGC
                      ____________________________________________________________
consensus                                                           AAACGAGAAGCCGC
 
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rJMSF040B24+          TTTGGCTTTTAAGAGATGGGTGGGTCTACATTGAAGAAGCAATTCTTTCGTGAATTTCAG
                      ____________________________________________________________
consensus             TTTGGCTTTTAAGAGATGGGTGGGTCTACATTGAAGAAGCAATTCTTTCGTGAATTTCAG
 
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rJMSF040B24+          AACCCTGGTCACGATTCTTACATTCTTCAGGGATTATCAAGTGAAAAATCCTATACCCAG
                      ____________________________________________________________
consensus             AACCCTGGTCACGATTCTTACATTCTTCAGGGATTATCAAGTGAAAAATCCTATACCCAG
 
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rJMSF040B24+          CCATGAGAGGAGTAAGAAGATTTCTGTTATCAGATCACCAAGTGGTTATCAGATGTCTTC
                      ____________________________________________________________
consensus             CCATGAGAGGAGTAAGAAGATTTCTGTTATCAGATCACCAAGTGGTTATCAGATGTCTTC
 
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rJMSF040B24+          ATCAGTAGAGTGGCATTTATGATGGCACTGCAATCTCTCCTTCTCAAAGCTCGAAAGATG
                      ____________________________________________________________
consensus             ATCAGTAGAGTGGCATTTATGATGGCACTGCAATCTCTCCTTCTCAAAGCTCGAAAGATG
 
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rJMSF040B24+          AAGAATTTAGCAAGAACTTATGCAAGATCATTGCCAGTGTTAGTGAACATCAGCCACCTA
                      ____________________________________________________________
consensus             AAGAATTTAGCAAGAACTTATGCAAGATCATTGCCAGTGTTAGTGAACATCAGCCACCTA
 
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rJMSF017O14+                      ACTTTATGGACATAAACGTATTGGCNTTTNNGGTTCCCGCNGGTATTG
rJMSF040B24+          CATGGCCCTCTTACTTTATGGACATAAACGTATTGGCATTTTTGGTTCCTGCTGGTATTG
                      ____________________________________________________________
consensus             CATGGCCCTCTTACTTTATGGACATAAACGTATTGGCATTTTTGGTTCCTGCTGGTATTG
 
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rJMSF017O14+          TTGCANGCTTTTTTGCCACTCTTGTGGTTCNNTATCTTGTAACATCAGTATATTTNNANG
rJMSF040B24+          TTGCATGTTTTTTTGCCACTTTTGTGGTTCTTTATCTTGTAACATCAGTATATTTTTATG
                      ____________________________________________________________
consensus             TTGCATGTTTTTTTGCCACTTTTGTGGTTCTTTATCTTGTAACATCAGTATATTTTTATG
 
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rJMSF017O14+          GNGTCATGGTCCATNNAANGCTTGTNACNTGCTCCAGCAGCATGCATTANGTCNGGAANT
rJMSF040B24+          GTGTCATGGTCCATCTAATGCTTGTTACTTGCTCCAGCAGCATGCATTATGTCTGGAATT
                      ____________________________________________________________
consensus             GTGTCATGGTCCATCTAATGCTTGTTACTTGCTCCAGCAGCATGCATTATGTCTGGAATT
 
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rJMSF017O14+          GCTCTNTCCCAAGCTTNTGATGNTTNGANTCGNTCANTCAAATTCCCTTCNCCTAATAAT
rJMSF040B24+          GCTCTTTCCCAAGCTTTTGATGTTTTGACTCGATCAATCAAATTCCCTTCACCTAATAAT
                      ____________________________________________________________
consensus             GCTCTTTCCCAAGCTTTTGATGTTTTGACTCGATCAATCAAATTCCCTTCACCTAATAAT
 
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rJMSF017O14+          GCATCAGAACATCCACAAATCAATGCAGGGGANGCCACCAANGNNGACTCGAAGANNGAT
rJMSF040B24+          GCATCAGAATATCCACAAATCAATGCAGGGGATGCCACCAATGCTGACTCGAAGAGTGAT
                      ____________________________________________________________
consensus             GCATCAGAATATCCACAAATCAATGCAGGGGATGCCACCAATGCTGACTCGAAGAGTGAT
 
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rJMSF017O14+          GTAGTNAAGGCCGTTCNGAATGGGTAGNTNGNGTATCAAGTNATNTACAATANGTATGCT
rJMSF040B24+          GTAGTGAAGGCCGTTCTGAATGGGTAGATTGTGTATCAAGTTATATACAATAGGTATGCT
                      ____________________________________________________________
consensus             GTAGTGAAGGCCGTTCTGAATGGGTAGATTGTGTATCAAGTTATATACAATAGGTATGCT
 
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rJMSF017O14+          CTTGAACATTTAAGACTNGGTGATTGAAATTGTTCATTGANGTANTTAGATTTGGTGACN
rJMSF040B24+          TTTGAACATTT-AGATTTGGTGATTGAAATTGTTCATTGAAGTATTTAGATTTGGTGA-T
                      ____________________________________________________________
consensus             TTTGAACATTTAAGATTTGGTGATTGAAATTGTTCATTGAAGTATTTAGATTTGGTGACT
 
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rJMSF017O14+          TAGTTCTTGTGTATTTTGTACATTGTGAAC                              
rJMSF040B24+          TAGTTCTTGTGTATTTTGTACATTGTGAACCATTGTGTATCTAGATTTGGTGATGGTGTT
                      ____________________________________________________________
consensus             TAGTTCTTGTGTATTTTGTACATTGTGAACCATTGTGTATCTAGATTTGGTGATGGTGTT