Contig 004347:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001K22Sequence289004347 (4)gb|EYU41627.1|7e-25hypothetical protein MIMGU_mgv1a010149mg [Erythranthe guttata]755004347 (4)ref|XP_006361789.1|4e-94PREDICTED: probable beta-1,4-xylosyltransferase IRX9-like [Solanum tuberosum]
JMSF040A09Sequence655004347 (4)ref|XP_011077373.1|4e-50PREDICTED: probable beta-1,4-xylosyltransferase IRX9 [Sesamum indicum]819004347 (4)ref|XP_006361789.1|8e-95PREDICTED: probable beta-1,4-xylosyltransferase IRX9-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF001K22-                     GGCAATATCCCCCACAGGTAGCCAAATTCTGCAGAGAATAAGGCTTTGCA
JMSF040A09-                     GGCAATATCCCCCACAGGTAGCCAAATTCTGCAGAGAATAAGGCTTTGCA
                      ____________________________________________________________
consensus                       GGCAATATCCCCCACAGGTAGCCAAATTCTGCAGAGAATAAGGCTTTGCA
 
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JMSF001K22-           TGATGGGATCCATGGAGAGATCAAAGAAGAAAGTACAGCTATGGAAGAAAGCCATAGTCC
JMSF040A09-           TGATGGGATCCATGGAGAGATCAAAGAAGAAAGTACAGCTATGGAAGAAAGCCATAGTCC
                      ____________________________________________________________
consensus             TGATGGGATCCATGGAGAGATCAAAGAAGAAAGTACAGCTATGGAAGAAAGCCATAGTCC
 
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JMSF001K22-           ATTTTCTGCTGTGTTTTGTGATGGGGTTCTTCACAGGCTTTGCTCCAGCTGGGAAGGCGT
JMSF040A09-           ATTTTCTGCTGTGTTTTGTGATGGGGTTCTTCACAGGCTTTGCTCCAGCTGGGAAGGCGT
                      ____________________________________________________________
consensus             ATTTTCTGCTGTGTTTTGTGATGGGGTTCTTCACAGGCTTTGCTCCAGCTGGGAAGGCGT
 
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JMSF001K22-           CGATATTTTCTGGGAAGCTTTCTGTCTCGAAAGCTCAAGCGAATTACACCGGAAAGCCTG
JMSF040A09-           CGATATTTTCTGGGAAGCTTTCTGTCTCGAAAGCTCAAGCGAATTACACCGGAAAGCCTG
                      ____________________________________________________________
consensus             CGATATTTTCTGGGAAGCTTTCTGTCTCGAAAGCTCAAGCGAATTACACCGGAAAGCCTG
 
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JMSF001K22-           TCGAGATCCCACATGGAACAAGAACACAGGGTGATCAGAATTTGAACGCGACTTTGTTA 
JMSF040A09-           TCGAGATCCCACATGGAACAAGAACACAGGGTGATCAGAATTTGAACGCGACTTTGTTAG
                      ____________________________________________________________
consensus             TCGAGATCCCACATGGAACAAGAACACAGGGTGATCAGAATTTGAACGCGACTTTGTTAG
 
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JMSF040A09-           GTAGAAATTTTTCTGCAGAGCCAGCAAGGTCCAACAATGCATCAAAACCCGCACTCTCCA
                      ____________________________________________________________
consensus             GTAGAAATTTTTCTGCAGAGCCAGCAAGGTCCAACAATGCATCAAAACCCGCACTCTCCA
 
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JMSF040A09-           AGAAGCTGCAGGCAAAGGGGGTGGCAGAGGATCTGGACCCGCGGAGGCTTATAATCATTG
                      ____________________________________________________________
consensus             AGAAGCTGCAGGCAAAGGGGGTGGCAGAGGATCTGGACCCGCGGAGGCTTATAATCATTG
 
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JMSF040A09-           TCACCCCAACAAGCGCGAGAAACCAGCTCAGAGGGGCGCTGATAAGGCGGCTGGCAAGCA
                      ____________________________________________________________
consensus             TCACCCCAACAAGCGCGAGAAACCAGCTCAGAGGGGCGCTGATAAGGCGGCTGGCAAGCA
 
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JMSF040A09-           CGCTGAGGCTGGTGCCTCAGCCGCTCGTGTGGGTGGTTGTGGAGCAGCAGTCCGAGGATT
rJMSF040A09+                               CGCTCGTGTGGGTGGTTGTGGAGCAGCAGTCCGAGGATT
                      ____________________________________________________________
consensus             CGCTGAGGCTGGTGCCTCAGCCGCTCGTGTGGGTGGTTGTGGAGCAGCAGTCCGAGGATT
 
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JMSF040A09-           CTGAGGTTTCTGAGATACTAAGAAAGACGGAATCATGTACAGACACCTGGTGTCCAAGGA
rJMSF001K22+                                      GGAATCATGTNCAGACACCTGGTGTCCAAGGA
rJMSF040A09+          CTGAGGTTTCTGAGATACTAAGAAAGACGGAATCATGTACAGACACCTGGTGTCCAAGGA
                      ____________________________________________________________
consensus             CTGAGGTTTCTGAGATACTAAGAAAGACGGAATCATGTACAGACACCTGGTGTCCAAGGA
 
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JMSF040A09-           GAACTTCACCGACATCCAGGAGGAGCTTGATCATCAGAGGAATGTTGCTCTGAACCACAT
rJMSF001K22+          GAACTTCACCGACATCCAGGAGGAGCTTGATCATCAGAGGAATGTTGCTCTGAACCACAT
rJMSF040A09+          GAACTTCACCGACATCCAGGAGGAGCTTGATCATCAGAGGAATGTTGCTCTGAACCACAT
                      ____________________________________________________________
consensus             GAACTTCACCGACATCCAGGAGGAGCTTGATCATCAGAGGAATGTTGCTCTGAACCACAT
 
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JMSF040A09-           CGAAC                                                       
rJMSF001K22+          CGAACACCACAGGCTGAGTGGGATTGTTCATTTCGCTGGGCTTTTCAATGTCTATGATCT
rJMSF040A09+          CGAACACCACAGGCTGAGTGGGATTGTTCATTTCGCTGGGCTTTTCAATGTCTATGATCT
                      ____________________________________________________________
consensus             CGAACACCACAGGCTGAGTGGGATTGTTCATTTCGCTGGGCTTTTCAATGTCTATGATCT
 
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rJMSF001K22+          CAGCTTCTTCCATCATCTCAGATCAATCGAGGTATTTGGGACATGGCCAGTGGCATTGTT
rJMSF040A09+          CAGCTTCTTCCATCATCTCAGATCAATCGAGGTATTTGGGACATGGCCAGTGGCATTGTT
                      ____________________________________________________________
consensus             CAGCTTCTTCCATCATCTCAGATCAATCGAGGTATTTGGGACATGGCCAGTGGCATTGTT
 
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rJMSF001K22+          GTCAGCAAACAAGAATGAAGTGGTGATAGAAGGGCCAGTGTGTGATTCTTCAGAGGTAAT
rJMSF040A09+          GTCAGCAAACAAGAATGAAGTGGTGATAGAAGGGCCAGTGTGTGATTCTTCAGAGGTAAT
                      ____________________________________________________________
consensus             GTCAGCAAACAAGAATGAAGTGGTGATAGAAGGGCCAGTGTGTGATTCTTCAGAGGTAAT
 
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rJMSF001K22+          AGGATGGCATTTGAAGAGAGCAAACATGAATAATCAAACAGATTATGATGATGATCAAAA
rJMSF040A09+          AGGATGGCATTTGAAGAGAGCAAACATGAATAATCAAACAGATTATGATGATGATCAAAA
                      ____________________________________________________________
consensus             AGGATGGCATTTGAAGAGAGCAAACATGAATAATCAAACAGATTATGATGATGATCAAAA
 
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rJMSF001K22+          GCCTGCAATTAGGGTTTCCAATTTTGCATTCAACAGTTCAATTCTTTGGGATCCTGAGAG
rJMSF040A09+          GCCTGCAATTAGGGTTTCCAATTTTGCATTCAACAGTTCAATTCTTTGGGATCCTGAGAG
                      ____________________________________________________________
consensus             GCCTGCAATTAGGGTTTCCAATTTTGCATTCAACAGTTCAATTCTTTGGGATCCTGAGAG
 
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rJMSF001K22+          ATGGGGCCGTACATCTTCTCTCCAAGACACCTCTCAGGATTCACTGAAATTTGTGAGAAA
rJMSF040A09+          ATGGGGCCGTACATCTTCTCTCCAAGACACCTCTCAGGATTCACTGAAATTTGTGAGAAA
                      ____________________________________________________________
consensus             ATGGGGCCGTACATCTTCTCTCCAAGACACCTCTCAGGATTCACTGAAATTTGTGAGAAA
 
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rJMSF001K22+          GGAGGTGATTGAAGATGAGGCGAAGTTGATGGGGATTCCTCAAGAGGATGATTGCTCAAA
rJMSF040A09+          GGAGGTGATTGAAGATGAGGCGAAGTTGATGGGGATTCCTCAAGAGGATGATTGCTCAAA
                      ____________________________________________________________
consensus             GGAGGTGATTGAAGATGAGGCGAAGTTGATGGGGATTCCTCAAGAGGATGATTGCTCAAA
 
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rJMSF001K22+          AGTCCTTTTATGGAATCTCCAATCATTATGAACACAACATCATTTTCTTGTGTGTTGATG
rJMSF040A09+          AGTCCTTTTATGGAATCTCCAATCATTATGAACACAACATCATTTTCTTGTGTGTTGATG
                      ____________________________________________________________
consensus             AGTCCTTTTATGGAATCTCCAATCATTATGAACACAACATCATTTTCTTGTGTGTTGATG
 
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rJMSF001K22+          GTTTAGCCAAGTTAGTTGATAGTTAAAAGCCAAAGACCATGGCCAGCAATTTCATGGAAA
rJMSF040A09+          GTTTAGCCAAGTTAGTTGATAGTTAAAAGCCAAAGACCATGGCCAGCAATTTCATGGAAA
                      ____________________________________________________________
consensus             GTTTAGCCAAGTTAGTTGATAGTTAAAAGCCAAAGACCATGGCCAGCAATTTCATGGAAA
 
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rJMSF001K22+          TGAAGAGATCCAATCTCATAGTTTTTGTCAAAATTTTTATGTTGCAATAGTTGGCATTCT
rJMSF040A09+          TGAAGAGATCCAATCTCATAGTTTTTGTCAAAATTTTTATGTTGCAATAGTTGGCATTCT
                      ____________________________________________________________
consensus             TGAAGAGATCCAATCTCATAGTTTTTGTCAAAATTTTTATGTTGCAATAGTTGGCATTCT
 
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rJMSF001K22+          ACTCCTTTTTCTTAATACTTTTTCTT-CATGTAATAATTATTTTAGGAAAAAAAAAT   
rJMSF040A09+          ACTCCTTTTTCTTAATACTTTTTCTTCCATGTAATAATTATTTTAGGAAAAAAAAATGAA
                      ____________________________________________________________
consensus             ACTCCTTTTTCTTAATACTTTTTCTTCCATGTAATAATTATTTTAGGAAAAAAAAATGAA