Contig 004346:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039N05Sequence686000898 (2)ref|XP_009612154.1|3e-20PREDICTED: uncharacterized protein LOC104105528 isoform X2 [Nicotiana tomentosi820004346 (2)ref|XP_006344738.1|3e-120PREDICTED: uncharacterized protein LOC102598801 isoform X3 [Solanum tuberosum]
JMSF039O21Sequence677000898 (2)ref|XP_009612154.1|7e-19PREDICTED: uncharacterized protein LOC104105528 isoform X2 [Nicotiana tomentosi767004346 (2)ref|XP_006344738.1|2e-90PREDICTED: uncharacterized protein LOC102598801 isoform X3 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF039N05+                                            GAAGTTGTTTNGGGTTGACAACGCGA
                      ____________________________________________________________
consensus                                               GAAGTTGTTTNGGGTTGACAACGCGA
 
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rJMSF039N05+          ACAGCTTGCAAGATGCTACACACCATATTGAGGAATGTAAAGTTGTGGGCCTTGACTGTG
                      ____________________________________________________________
consensus             ACAGCTTGCAAGATGCTACACACCATATTGAGGAATGTAAAGTTGTGGGCCTTGACTGTG
 
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rJMSF039N05+          AATGGAAGCCTAATTATGAAAAGGGAAGCTTACCTAACAAGGTTTCTATAATGCAAA-TT
rJMSF039O21+                       TTATGAAAAGGGAAGCTTACCTAACAAGGTTTCTATAATGCAAATTT
                      ____________________________________________________________
consensus             AATGGAAGCCTAATTATGAAAAGGGAAGCTTACCTAACAAGGTTTCTATAATGCAAATTT
 
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rJMSF039N05+          GCTTCTGAAAGGAAGGCTTACATACTTGATCTCATAAAACTATACAATGATGTTCCAGAT
rJMSF039O21+          GCTTCTGAAAGGAAGGCTTACATACTTGATCTCATAAAACTATACAATGATGTTCCAGAT
                      ____________________________________________________________
consensus             GCTTCTGAAAGGAAGGCTTACATACTTGATCTCATAAAACTATACAATGATGTTCCAGAT
 
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rJMSF039N05+          ATTTTAGATGATTGCCTAGTGCGAATACTTCATTCTCCTAGAATACTAAAACTTGGGTAC
rJMSF039O21+          ATTTTAGATGATTGCCTAGTGCGAATACTTCATTCTTCTAGAATACTAAAACTTGGGTAC
                      ____________________________________________________________
consensus             ATTTTAGATGATTGCCTAGTGCGAATACTTCATTCTTCTAGAATACTAAAACTTGGGTAC
 
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rJMSF039N05+          AATTTTCAATGTGATGTGGCTCAACTTGCTCGATCTTATGGAAGGCTGGAGTGCTTTAAG
rJMSF039O21+          AATTTTCAATGTGATGTGGCTCAACTTGCTCGATCTTATGGAAGGCTGGAGTGCTTTAAG
                      ____________________________________________________________
consensus             AATTTTCAATGTGATGTGGCTCAACTTGCTCGATCTTATGGAAGGCTGGAGTGCTTTAAG
 
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rJMSF039N05+          CACTATGACATGCTACTTGATATTCAGAATGTTTTTAAAGAGCCGAGGGGTGGTCTTTCT
rJMSF039O21+          CACTATGACATGCTACTTGATATTCAGAATGTTTTTAAAGAGCCGAGGGGTGGTCTTTCT
                      ____________________________________________________________
consensus             CACTATGACATGCTACTTGATATTCAGAATGTTTTTAAAGAGCCGAGGGGTGGTCTTTCT
 
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rJMSF039N05+          GGTCTAGCGAAGAAAATATTGGGAACTGGTTTGAACAAAACAAGACGGAATAGCAACTGG
rJMSF039O21+          GGTCTAGCGAAGAAAATATTGGGAACTGGTTTGAACAAAACAAGACGGAATAGCAACTGG
                      ____________________________________________________________
consensus             GGTCTAGCGAAGAAAATATTGGGAACTGGTTTGAACAAAACAAGACGGAATAGCAACTGG
 
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rJMSF039N05+          GAGCAACGACCTTTAACTCAATATCAGCTAGAATATGCTGCACTTGATGCTGTTGTTCTC
rJMSF039O21+          GAGCAACGACCTTTAACTCAATATCAGCTAGAATATGCTGCACTTGATGCTGTTGTTCTC
                      ____________________________________________________________
consensus             GAGCAACGACCTTTAACTCAATATCAGCTAGAATATGCTGCACTTGATGCTGTTGTTCTC
 
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rJMSF039N05+          ATCCATATATTTCGTCATGTTCGTGGCCACACACAGCCTGCTGGTGCCTCTGATGGACAT
rJMSF039O21+          ATCCATATATTTCGTCATGTTCGTGGCCACACACAGCCTGCTGGTGCCTCTGATGGACAT
                      ____________________________________________________________
consensus             ATCCATATATTTCGTCATGTTCGTGGCCACACACAGCCTGCTGGTGCCTCTGATGGACAT
 
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rJMSF039N05+          AACAAAATTGAGTGGAAATCACACATTGTATCACACATGGATAACTCGAAAAAGGCCAAG
rJMSF039O21+          AACAAAATTGAGTGGAAATCACACATTGTATCACACATGGATAACTCGAAAAAGGCCAAG
                      ____________________________________________________________
consensus             AACAAAATTGAGTGGAAATCACACATTGTATCACACATGGATAACTCGAAAAAGGCCAAG
 
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rJMSF039N05+          AAGGAAACCAAGAAGAAGGAACAATGTTCTCCAACAAGCCATGGGCTGATCTGCCTTGAT
rJMSF039O21+          AAGGAAACCAAGAAGAAGGAACAATGTTCTCCAACAAGCCATGGGCTGATCTGCCTTGAT
                      ____________________________________________________________
consensus             AAGGAAACCAAGAAGAAGGAACAATGTTCTCCAACAAGCCATGGGCTGATCTGCCTTGAT
 
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rJMSF039N05+          GCTGAATTTGAGCAATGACACATTCTGTCTATGCCTTGATGCTGATTATGTAGTTATATA
rJMSF039O21+          GCTGAATTTGAGCAATGACACATTCTGTCTATGCCTTGATGCTGATTATGTAGTTATATA
                      ____________________________________________________________
consensus             GCTGAATTTGAGCAATGACACATTCTGTCTATGCCTTGATGCTGATTATGTAGTTATATA
 
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rJMSF039N05+          TGTGCATATAGTACTTTCAAATTGAATTCAAGAAACCAATTATATGAACCTTGTTAGTTG
rJMSF039O21+          TGTGCATATAGTACTTTCAAATTGAATTCAAGAAACCAATTATATGAACCTTGTTAGTTG
                      ____________________________________________________________
consensus             TGTGCATATAGTACTTTCAAATTGAATTCAAGAAACCAATTATATGAACCTTGTTAGTTG
 
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rJMSF039N05+          CAGAGTGATAT                                                 
rJMSF039O21+          CAGAGTGATATTGAGCATAGCAGTTCTAAATTTAATTTGCCCAGAATTTTATCCGAATTG
                      ____________________________________________________________
consensus             CAGAGTGATATTGAGCATAGCAGTTCTAAATTTAATTTGCCCAGAATTTTATCCGAATTG