Contig 004345:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022A03Sequence691002219 (2)ref|XP_006345226.1|3e-80PREDICTED: CBL-interacting serine/threonine-protein kinase 24-like [Solanum tub687004345 (2)gb|EYU23010.1|2e-63hypothetical protein MIMGU_mgv1a0074941mg, partial [Erythranthe guttata]
JMSF039O12Sequence660002219 (2)ref|XP_006345226.1|8e-79PREDICTED: CBL-interacting serine/threonine-protein kinase 24-like [Solanum tub742004345 (2)ref|XP_009607229.1|2e-57PREDICTED: CBL-interacting serine/threonine-protein kinase 24 isoform X1 [Nicot

Alignment

This contig is upended


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rJMSF039O12+                                               GCCTGAAAGCACCAACAATGGCC
                      ____________________________________________________________
consensus                                                  GCCTGAAAGCACCAACAATGGCC
 
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rJMSF022A03+                                                   GGGTTGAACCTCTCACCGT
rJMSF039O12+          CTTTCGTTATGAATGCTTTTGAAATGATTACTTTGTCTCAAGGGTTGAACCTCTCACCGT
                      ____________________________________________________________
consensus             CTTTCGTTATGAATGCTTTTGAAATGATTACTTTGTCTCAAGGGTTGAACCTCTCACCGT
 
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rJMSF022A03+          TGTTNGATAGGCGCCAGGATTATGTCAAGCGACAAACCCGTTTTGTATCACGCCAACCTG
rJMSF039O12+          TGTTTGATAGGCGCCAGGATTATGTCAAGCGACAAACCCGTTTTGTATCACGCCAACCTG
                      ____________________________________________________________
consensus             TGTTTGATAGGCGCCAGGATTATGTCAAGCGACAAACCCGTTTTGTATCACGCCAACCTG
 
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rJMSF022A03+          CCAATGTCATCATATCTACAANTGAAGCAGCTGCAGAATCAATGGGACTAAAGGTCCATA
rJMSF039O12+          CCAATGTCATCATATCTACAATTGAAGCAGCTGCAGAATCAATGGGACTAAAGGTCCATA
                      ____________________________________________________________
consensus             CCAATGTCATCATATCTACAATTGAAGCAGCTGCAGAATCAATGGGACTAAAGGTCCATA
 
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rJMSF022A03+          CGCGTAACTACAAGACTAGAATTGAAGGTGTATCTGAAAACAAGGCGGTCAATTTCGCCG
rJMSF039O12+          CGCGTAACTACAAGACTAGAATTGAAGGTGTATCTGAAAACAAGGCGGTCAATTTCGCCG
                      ____________________________________________________________
consensus             CGCGTAACTACAAGACTAGAATTGAAGGTGTATCTGAAAACAAGGCGGTCAATTTCGCCG
 
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rJMSF022A03+          TTGTTTTGGAGGTTTTCCAAGTTGCCCCATCTCTTTACATGGTGGATGTCCGAAAGGCAG
rJMSF039O12+          TTGTTTTGGAGGTTTTCCAAGTTGCCCCATCTC-TTACATGGTGGATGTCCGAAAGGCAG
                      ____________________________________________________________
consensus             TTGTTTTGGAGGTTTTCCAAGTTGCCCCATCTCTTTACATGGTGGATGTCCGAAAGGCAG
 
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rJMSF022A03+          CTGGAGATACTCTTGAATATCACAGGTTCTACAAGAACTTGTGTGAAAAAATTGAGAACG
rJMSF039O12+          CTGGAGATACTCTTGAATATCACAGGTTCTACAAGAACTTGTGTGAAAAAATTGAGAACG
                      ____________________________________________________________
consensus             CTGGAGATACTCTTGAATATCACAGGTTCTACAAGAACTTGTGTGAAAAAATTGAGAACG
 
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rJMSF022A03+          TTATTTGGAAATCAAAGGAATAAGGGATGACAGATACTGCTGCGCTTAGACCAATGACTT
rJMSF039O12+          TTATTTGGAAATCAAAGGAATAAGGGATGACAGATACTGCTGCGCTTAGACCAATGACTT
                      ____________________________________________________________
consensus             TTATTTGGAAATCAAAGGAATAAGGGATGACAGATACTGCTGCGCTTAGACCAATGACTT
 
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rJMSF022A03+          GCTGATCTGATTCAAGGGTGTGAAGCAAATCGGTTAACCTAGCAATGCAGCCAAAGCCAG
rJMSF039O12+          GCTGATCTGATTCAAGGGTGTGAAGCAAATCGGTTAACCTAGCAATGCAGCCAAAGCCAG
                      ____________________________________________________________
consensus             GCTGATCTGATTCAAGGGTGTGAAGCAAATCGGTTAACCTAGCAATGCAGCCAAAGCCAG
 
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rJMSF022A03+          CCATTCCTCAGTTCAAGGTTTGCAGAACGAAATCTGGTTATTAGCCTGTCATATATTGCT
rJMSF039O12+          CCATTCCTCAGTTCAAGGTTTGCAGAACGAAATCTGGTTATTAGCCTGTCATATATTGCT
                      ____________________________________________________________
consensus             CCATTCCTCAGTTCAAGGTTTGCAGAACGAAATCTGGTTATTAGCCTGTCATATATTGCT
 
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rJMSF022A03+          GTGCTTGTATAGTGTGCGGAATTTGATCTTTCTGCAGCTATATGGTTGGCTTAAACCAGC
rJMSF039O12+          GTGCTTGTATAGTGTGCGGAATTTGATCTTTCTGCAGCTATATGGTTGGCTTAAACCAGC
                      ____________________________________________________________
consensus             GTGCTTGTATAGTGTGCGGAATTTGATCTTTCTGCAGCTATATGGTTGGCTTAAACCAGC
 
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rJMSF022A03+          CACCACTCTGCCGCTCAGCATCTTAATCTTAATGTTGAATCGGTCTTTATACAAACGTGA
rJMSF039O12+          CACCACTCTGCCGCTCAGCATCTTAATCTTAATGTTGAATCGGTCTTTATACAAACGTGA
                      ____________________________________________________________
consensus             CACCACTCTGCCGCTCAGCATCTTAATCTTAATGTTGAATCGGTCTTTATACAAACGTGA
 
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rJMSF022A03+          GAGATTGCATAGGGAGATTCTTCCTTGTGACTGCGTTCCGCTGATAGAATGCCATTT   
rJMSF039O12+          GAGATTGCATAGGGAGATTCTTCCTTGTGACTGCGTTCCGCTGATAGAATGCCATTTCTG
                      ____________________________________________________________
consensus             GAGATTGCATAGGGAGATTCTTCCTTGTGACTGCGTTCCGCTGATAGAATGCCATTTCTG