Contig 004342: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
rJMSF039J15+ ATNTTTTGGAAGAAAATAATCAAGNTNTTGATCAA
____________________________________________________________
consensus ATNTTTTGGAAGAAAATAATCAAGNTNTTGATCAA
. : . : . : . : . : . :
rJMSF039J15+ ATTTCAACAAACCTTTCAACATATAAGNTGCNGGNTAACGTTGNCCTTTTNTTTCGTACA
____________________________________________________________
consensus ATTTCAACAAACCTTTCAACATATAAGNTGCNGGNTAACGTTGNCCTTTTNTTTCGTACA
. : . : . : . : . : . :
rJMSF039J15+ AGGNACAANATAACTGCNATCCTCAACGAAATGNGCNATNTGCCTGGGNTCNTGNGCCNA
____________________________________________________________
consensus AGGNACAANATAACTGCNATCCTCAACGAAATGNGCNATNTGCCTGGGNTCNTGNGCCNA
. : . : . : . : . : . :
rJMSF027M04+ GTAGTATTTTGCCAAATTCA
rJMSF039J15+ ATGCCCCCGCTTCCTGNGTTTNTTGNTGAAGNGNTTNCTNGTAGTNTTTTGCCAAATTCA
____________________________________________________________
consensus ATGCCCCCGCTTCCTGNGTTTNTTGNTGAAGNGNTTNCTNGTAGTATTTTGCCAAATTCA
. : . : . : . : . : . :
rJMSF027M04+ ACTCNGTCCCTGATGTTTGGNTCNTCNAGCGGGNTCCNGNTGAAACNGGAACCNGGATGT
rJMSF039J15+ ACTCNGTCCCTGANGTTTGGNTCATCNAGNGGGNTCCNGNTGAAACNGGAACCNGGATGT
____________________________________________________________
consensus ACTCNGTCCCTGATGTTTGGNTCATCNAGCGGGNTCCNGNTGAAACNGGAACCNGGATGT
. : . : . : . : . : . :
rJMSF027M04+ TGACNGNGATTTNTCNGNGNTGAGNTGAATTACTGGNGNGNGTAAGTAGNCCNTTTTTTT
rJMSF039J15+ TGACNGNGATTTTTCNGNGNTGAGTTGAATTACTGGNGNGNGTAAGTAGNCCNTTTTTTT
____________________________________________________________
consensus TGACNGNGATTTTTCNGNGNTGAGTTGAATTACTGGNGNGNGTAAGTAGNCCNTTTTTTT
. : . : . : . : . : . :
rJMSF027M04+ GCNGTAAANGCATAAGAAGNTGGCNGGCCTTTCCGGNTTTTGTACNCAACNCAAGTTGGG
rJMSF039J15+ GCNGTAAANGCNTAAGAAGNTGGCNGGCCTTTCCGGNTTTTGTACNCAACNCNAGTTGGG
____________________________________________________________
consensus GCNGTAAANGCATAAGAAGNTGGCNGGCCTTTCCGGNTTTTGTACNCAACNCAAGTTGGG
. : . : . : . : . : . :
rJMSF027M04+ TCCCGNGGGNTAAAGAATACCTTAGATAACCTNTTTNGGAAGNTGAAATNTTTGCTGTNC
rJMSF039J15+ TCCCGNGGGNTAAAGAATACCTTAGNTAACCTNTTTNGGAAGNTGAAATNTTTGCTGTNC
____________________________________________________________
consensus TCCCGNGGGNTAAAGAATACCTTAGATAACCTNTTTNGGAAGNTGAAATNTTTGCTGTNC
. : . : . : . : . : . :
rJMSF027M04+ CNGATNCTGNGCCCNAGCCCTGGNTAATAACNGCCTCNTTGTNGGTTAAACGTCAGCCNG
rJMFF035K05+ GCCCNAGCCCTGGATAATAACAGCCTCATTGTNGGTTAAACGTCAGCCNG
rJMSF039J15+ CNGATNCTGNGCCCNAGCCCTGGNTAATAACNGCCTCNTTGTCGGTTAAACGTCAGCCNG
____________________________________________________________
consensus CNGATNCTGNGCCCNAGCCCTGGATAATAACAGCCTCATTGTCGGTTAAACGTCAGCCNG
. : . : . : . : . : . :
rJMSF027M04+ TNTNTAATCNGNTTGCNTTNTAGAAAGCNAGCNAGCTAGNTAAAAAAAAAAAATTATGAG
rJMFF035K05+ TTTTTAATCAGATTGCNTTTTNGAAAGCAAGCAAGNTAGNTAAAAAAAAAAAATTATGAG
rJMSF039J15+ TNTTTAATCNGNTTGCCTTNTAGAAAGCNAGCNAGCTAGNTAAAAAAAAAAAATTATGAG
____________________________________________________________
consensus TTTTTAATCAGATTGCCTTTTAGAAAGCAAGCAAGCTAGNTAAAAAAAAAAAATTATGAG
. : . : . : . : . : . :
rJMSF027M04+ TTGTAGTCTTTTTGTGTGTAAATTTTATATAACTAATGAAAACTCTGGAGTCAGTCCATA
rJMFF035K05+ TTGTAGTCTTTTTGTGTGTAAATTTTATATAACTAATGAAAACTCTGGAGTCAGTCCATA
rJMSF039J15+ TTGTAGTCTTTTTGTGTGTAAATTTTATATAACTAATGAAAACTCTGGAGTCAGTCCATA
____________________________________________________________
consensus TTGTAGTCTTTTTGTGTGTAAATTTTATATAACTAATGAAAACTCTGGAGTCAGTCCATA
. : . : . : . : . : . :
rJMSF027M04+ GGGTTGTTATGTCCTTGTCATTTGCAGCCTTTAGCATTTGAAGATCAGTTTCTTGGTTTT
rJMFF035K05+ GGGTTGTTATGTCCTTGTCATTTGCAGCCTTTAGCATTTGAAGATCAGTTTCTTGGTTTT
rJMSF039J15+ GGGTTGTTATGTCCTTGTCATTTGCAGCCTTTAGCATTTGAAGATCAGTTTCTTGGTTTT
____________________________________________________________
consensus GGGTTGTTATGTCCTTGTCATTTGCAGCCTTTAGCATTTGAAGATCAGTTTCTTGGTTTT
. : . : . : . : . : . :
rJMSF027M04+ GTGGTAAGGCCACATATAACATCATTTCT
rJMFF035K05+ GTGGTAAGGCCACATATAACATCATTTCTTGGTTATGAGAGCCCCACCTTGTAAGAAT
rJMSF039J15+ GTGGTAAGGCCACATATAACATCATTTCTTGGTTATGAGAGCCCCACCTTGTAAGAATTT
____________________________________________________________
consensus GTGGTAAGGCCACATATAACATCATTTCTTGGTTATGAGAGCCCCACCTTGTAAGAATTT